RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 E4F1Q66K89 784 aaPredicted RBP8.61□□□□□ -1.03
C11orf54-207ENST00000528288 ATL3Q6DD88 541 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 USP49Q70CQ1 688 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 SLC4A4Q9Y6R1 1079 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 PDE8AO60658 829 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 ELF2Q15723 593 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 CFAP100Q494V2 611 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
C11orf54-207ENST00000528288 PLA2G12BQ9BX93 195 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 FANCLQ9NW38 375 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 JAG2Q9Y219 1238 aa8.61□□□□□ -1.03
C11orf54-207ENST00000528288 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 PTPAQ15257 358 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 NTRK3Q16288 839 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 METTL16Q86W50 562 aaKnown RBP8.6□□□□□ -1.03
C11orf54-207ENST00000528288 CNNM3Q8NE01 707 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 LRP2BPQ9P2M1 347 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 LAMB4A4D0S4 1761 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 GSG1L2A8MUP6 293 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 SFPQP23246 707 aaKnown RBP eCLIP8.6□□□□□ -1.03
C11orf54-207ENST00000528288 RBM6P78332 1123 aaKnown RBP8.6□□□□□ -1.03
C11orf54-207ENST00000528288 SSRP1Q08945 709 aaKnown RBP8.6□□□□□ -1.03
C11orf54-207ENST00000528288 PUM3Q15397 648 aaKnown RBP8.6□□□□□ -1.03
C11orf54-207ENST00000528288 BICDL1Q6ZP65 573 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 ADGRA1Q86SQ6 560 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 HSD3B7Q9H2F3 369 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 PCDHA5Q9Y5H7 936 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
C11orf54-207ENST00000528288 UBE3CQ15386 1083 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 CPLX2Q6PUV4 134 aaKnown RBP8.6□□□□□ -1.03
C11orf54-207ENST00000528288 MAP3K14Q99558 947 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 TNS2Q63HR2 1409 aa8.6□□□□□ -1.03
C11orf54-207ENST00000528288 BAZ2BQ9UIF8 2168 aaKnown RBP8.6□□□□□ -1.03
C11orf54-207ENST00000528288 BMP6P22004 513 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 GYG1P46976 350 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 UBASH3AP57075 661 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 TTF1Q15361 905 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-207ENST00000528288 MFSD6Q6ZSS7 791 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 NYAP1Q6ZVC0 841 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 DIS3L2Q8IYB7 885 aaKnown RBP8.59□□□□□ -1.03
C11orf54-207ENST00000528288 PPP1R13BQ96KQ4 1090 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 KCNH3Q9ULD8 1083 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 PCDHB6Q9Y5E3 794 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 PATL2C9JE40 543 aaKnown RBP8.59□□□□□ -1.03
C11orf54-207ENST00000528288 ADAMTS2O95450 1211 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 TOB1P50616 345 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-207ENST00000528288 MAP3K12Q12852 859 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 NOM1Q5C9Z4 860 aaKnown RBP8.59□□□□□ -1.03
C11orf54-207ENST00000528288 LPIN2Q92539 896 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 STAMQ92783 540 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 MYH15Q9Y2K3 1946 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 POLR2DO15514 142 aaKnown RBP8.59□□□□□ -1.03
C11orf54-207ENST00000528288 FBXL16Q8N461 479 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 TEX13AQ9BXU3 409 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-207ENST00000528288 CABP5Q9NP86 173 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 SERTAD1Q9UHV2 236 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 PAXBP1Q9Y5B6 917 aa8.59□□□□□ -1.03
C11orf54-207ENST00000528288 SLC5A1P13866 664 aa8.59□□□□□ -1.04
C11orf54-207ENST00000528288 ZSCAN20P17040 1043 aaPredicted RBP8.59□□□□□ -1.04
C11orf54-207ENST00000528288 UTP14AQ9BVJ6 771 aaKnown RBP8.59□□□□□ -1.04
C11orf54-207ENST00000528288 RAI14Q9P0K7 980 aa8.59□□□□□ -1.04
C11orf54-207ENST00000528288 EXOC5O00471 708 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 CYP7A1P22680 504 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 ATP6V1AP38606 617 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 DYNLL1P63167 89 aaKnown RBP8.58□□□□□ -1.04
C11orf54-207ENST00000528288 RTN1Q16799 776 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 AKNAD1Q5T1N1 836 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 KLHL10Q6JEL2 608 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 KLHL34Q8N239 644 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 PRDM4Q9UKN5 801 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 ABCC6O95255 1503 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 AKAP11Q9UKA4 1901 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 CDKL5O76039 1030 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
C11orf54-207ENST00000528288 AFMP43652 599 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 STX17P56962 302 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 TPM4P67936 248 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 FMR1Q06787 632 aaKnown RBP eCLIP8.58□□□□□ -1.04
C11orf54-207ENST00000528288 WTAPQ15007 396 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 ERCC6LQ2NKX8 1250 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 KIF18AQ8NI77 898 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 EPC1Q9H2F5 836 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 ST7Q9NRC1 585 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 DNAI1Q9UI46 699 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 FBXO3Q9UK99 471 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 MTMR7Q9Y216 660 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 NIP7Q9Y221 180 aaKnown RBP eCLIP8.58□□□□□ -1.04
C11orf54-207ENST00000528288 CDHR2Q9BYE9 1310 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 UQCRFS1P1P0C7P4 283 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 FGFR2P21802 821 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 ADKP55263 362 aaKnown RBP8.58□□□□□ -1.04
C11orf54-207ENST00000528288 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 EARS2Q5JPH6 523 aaKnown RBP8.58□□□□□ -1.04
C11orf54-207ENST00000528288 RESP18Q5W5W9 173 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 KRBA2Q6ZNG9 492 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 C3orf67Q6ZVT6 689 aa8.58□□□□□ -1.04
C11orf54-207ENST00000528288 TOGARAM1Q9Y4F4 1720 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 710.1 ms