RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 CHPF2Q9P2E5 772 aa5.34□□□□□ -1.55
HIPK3-204ENST00000525975 ODF2LQ9ULJ1 636 aa5.34□□□□□ -1.55
HIPK3-204ENST00000525975 HPCAL4Q9UM19 191 aa5.34□□□□□ -1.55
HIPK3-204ENST00000525975 ARHGAP25P42331 645 aa5.34□□□□□ -1.56
HIPK3-204ENST00000525975 KCNV1Q6PIU1 500 aa5.34□□□□□ -1.56
HIPK3-204ENST00000525975 CPLX2Q6PUV4 134 aaKnown RBP5.34□□□□□ -1.56
HIPK3-204ENST00000525975 ILDR1Q86SU0 546 aaPredicted RBP5.34□□□□□ -1.56
HIPK3-204ENST00000525975 COG1Q8WTW3 980 aa5.34□□□□□ -1.56
HIPK3-204ENST00000525975 CAPZA3Q96KX2 299 aa5.34□□□□□ -1.56
HIPK3-204ENST00000525975 PANX2Q96RD6 677 aa5.34□□□□□ -1.56
HIPK3-204ENST00000525975 GOLGA8BA8MQT2 603 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 MYO1FO00160 1098 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 PPP1R12AO14974 1030 aaPredicted RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 ZEB2O60315 1214 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 RAPGEF3O95398 923 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 SYF2O95926 243 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 AARSP49588 968 aaKnown RBP eCLIP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 SARNPP82979 210 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 ATP2B2Q01814 1243 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 MCMDC2Q4G0Z9 681 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 CEP85LQ5SZL2 805 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 BEND3Q5T5X7 828 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 KLHL10Q6JEL2 608 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 RAB11FIP4Q86YS3 637 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 FMNL3Q8IVF7 1028 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 CEP120Q8N960 986 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 HSD3B7Q9H2F3 369 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 INTS13Q9NVM9 706 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 TUBE1Q9UJT0 475 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 PCDHA5Q9Y5H7 936 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 A0A1B0GUA9 196 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 EIF3HO15372 352 aaKnown RBP eCLIP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 OPA1O60313 960 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 EZRP15311 586 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 PDIA3P30101 505 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 CLNS1AP54105 237 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 CKAP4Q07065 602 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 TBX2Q13207 712 aaPredicted RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 LONRF3Q496Y0 759 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 WDR93Q6P2C0 686 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 RAD9BQ6WBX8 426 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 CNGA4Q8IV77 575 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 ANKRD18AQ8IVF6 992 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 ACRBPQ8NEB7 543 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 STAG1Q8WVM7 1258 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 CD248Q9HCU0 757 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 RBM28Q9NW13 759 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 GUCA1BQ9UMX6 200 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 MROH7-TTC4A0A0A0MT08 1334 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 GOLGA6L7A0A1B0GV03 622 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 GPTP24298 496 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 TRIM29Q14134 588 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 ZNF827Q17R98 1081 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 USPL1Q5W0Q7 1092 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 IQCEQ6IPM2 695 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 DDX46Q7L014 1031 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 GSPT2Q8IYD1 628 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 PRPF38AQ8NAV1 312 aaKnown RBP5.33□□□□□ -1.56
HIPK3-204ENST00000525975 NDUFB9Q9Y6M9 179 aa5.33□□□□□ -1.56
HIPK3-204ENST00000525975 PRPF6O94906 941 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 IPO7O95373 1038 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 USP14P54578 494 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 RBL2Q08999 1139 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 NAA25Q14CX7 972 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 TSR1Q2NL82 804 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SND1Q7KZF4 910 aaKnown RBP eCLIP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 IQCA1Q86XH1 822 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SPATS2Q86XZ4 545 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 MLKLQ8NB16 471 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 LTV1Q96GA3 475 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 ZNF274Q96GC6 653 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SCLT1Q96NL6 688 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 NUP88Q99567 741 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SELENOOQ9BVL4 669 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 EHD4Q9H223 541 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SNRKQ9NRH2 765 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 KCNH3Q9ULD8 1083 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 MAP3K2Q9Y2U5 619 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 PIK3C2BO00750 1634 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 CLTCQ00610 1675 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 KLF18A0A0U1RQI7 1052 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 A0A0U1RQJ8 604 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 FRMD3A2A2Y4 597 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SASH1O94885 1247 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SSBP05455 408 aaKnown RBP eCLIP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 GBP2P32456 591 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 BIRC2Q13490 618 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SLC39A14Q15043 492 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 STOX1Q6ZVD7 989 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 TXNDC2Q86VQ3 553 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 STK11IPQ8N1F8 1099 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 ANKRD24Q8TF21 1146 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 ATRIPQ8WXE1 791 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 MIEF2Q96C03 454 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SLF1Q9BQI6 1058 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 TRIM6Q9C030 488 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 SAMSN1Q9NSI8 373 aaKnown RBP5.32□□□□□ -1.56
HIPK3-204ENST00000525975 MYO1AQ9UBC5 1043 aa5.32□□□□□ -1.56
HIPK3-204ENST00000525975 A6NNZ2 444 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms