RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 PEAR1Q5VY43 1037 aaPredicted RBP7.71□□□□□ -1.18
SVIP-202ENST00000525670 RNF43Q68DV7 783 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 CLEC10AQ8IUN9 316 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 TRIM42Q8IWZ5 723 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 FAM20CQ8IXL6 584 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 SOX17Q9H6I2 414 aaPredicted RBP7.71□□□□□ -1.18
SVIP-202ENST00000525670 C7orf69Q9H7B7 122 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 PCMTD2Q9NV79 361 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 EFCAB6Q5THR3 1501 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 UGGT1Q9NYU2 1555 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 KANK1Q14678 1352 aa7.71□□□□□ -1.18
SVIP-202ENST00000525670 ZNF142P52746 1687 aaPredicted RBP7.7□□□□□ -1.18
SVIP-202ENST00000525670 ERVK-7P63135 1459 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 CD97P48960 835 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 FDX2Q6P4F2 183 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.7□□□□□ -1.18
SVIP-202ENST00000525670 ASAP3Q8TDY4 903 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 FAM83CQ9BQN1 747 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 LATS2Q9NRM7 1088 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 ROCK1Q13464 1354 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 TNRQ92752 1358 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 E9PCH4 1651 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 TET3O43151 1660 aa7.7□□□□□ -1.18
SVIP-202ENST00000525670 NAIPQ13075 1403 aa7.69□□□□□ -1.18
SVIP-202ENST00000525670 HMX2A2RU54 273 aa7.69□□□□□ -1.18
SVIP-202ENST00000525670 EIF4EBP3O60516 100 aaPredicted RBP7.69□□□□□ -1.18
SVIP-202ENST00000525670 BMP3P12645 472 aa7.69□□□□□ -1.18
SVIP-202ENST00000525670 SSTR4P31391 388 aa7.69□□□□□ -1.18
SVIP-202ENST00000525670 PREPP48147 710 aa7.69□□□□□ -1.18
SVIP-202ENST00000525670 HIF3AQ9Y2N7 669 aa7.69□□□□□ -1.18
SVIP-202ENST00000525670 IQGAP3Q86VI3 1631 aa7.69□□□□□ -1.18
SVIP-202ENST00000525670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.69□□□□□ -1.18
SVIP-202ENST00000525670 NPATQ14207 1427 aa7.69□□□□□ -1.18
SVIP-202ENST00000525670 FAM135AQ9P2D6 1515 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 SYNMO15061 1565 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 VWDEQ8N2E2 1590 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 PIK3C2BO00750 1634 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 COBLO75128 1261 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 ESRRAP11474 423 aaPredicted RBP7.68□□□□□ -1.18
SVIP-202ENST00000525670 ECM1Q16610 540 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 BEND4Q6ZU67 534 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 ZDHHC13Q8IUH4 622 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 DBNDD2Q9BQY9 259 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 TMPRSS13Q9BYE2 586 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 BRPF3Q9ULD4 1205 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 MYO5BQ9ULV0 1848 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 NUP155O75694 1391 aa7.68□□□□□ -1.18
SVIP-202ENST00000525670 SPATA31D1Q6ZQQ2 1576 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 TGFB1P01137 390 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 POLR3DP05423 398 aaPredicted RBP7.67□□□□□ -1.18
SVIP-202ENST00000525670 NEFLP07196 543 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 NUTM2GQ5VZR2 741 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 GLYCTKQ8IVS8 523 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 GALNT12Q8IXK2 581 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 KCNF1Q9H3M0 494 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 SUGCTQ9HAC7 445 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 HFM1A2PYH4 1435 aa7.67□□□□□ -1.18
SVIP-202ENST00000525670 STRCQ7RTU9 1775 aa7.66□□□□□ -1.18
SVIP-202ENST00000525670 LOC100289279A0A1B0GTE1 492 aa7.66□□□□□ -1.18
SVIP-202ENST00000525670 MED26O95402 600 aa7.66□□□□□ -1.18
SVIP-202ENST00000525670 SERPINB4P48594 390 aa7.66□□□□□ -1.18
SVIP-202ENST00000525670 C12orf50Q8NA57 414 aaPredicted RBP7.66□□□□□ -1.18
SVIP-202ENST00000525670 SMG8Q8ND04 991 aaKnown RBP7.66□□□□□ -1.18
SVIP-202ENST00000525670 USP26Q9BXU7 913 aa7.66□□□□□ -1.18
SVIP-202ENST00000525670 CYP4F12Q9HCS2 524 aa7.66□□□□□ -1.18
SVIP-202ENST00000525670 POLR1AO95602 1720 aaPredicted RBP7.66□□□□□ -1.18
SVIP-202ENST00000525670 SPHKAPQ2M3C7 1700 aa7.66□□□□□ -1.18
SVIP-202ENST00000525670 A0A1W2PP55 124 aa7.65□□□□□ -1.18
SVIP-202ENST00000525670 A2ML1A8K2U0 1454 aa7.65□□□□□ -1.18
SVIP-202ENST00000525670 METTL12A8MUP2 240 aa7.65□□□□□ -1.18
SVIP-202ENST00000525670 H3BRB1 525 aa7.65□□□□□ -1.18
SVIP-202ENST00000525670 GAS2O43903 313 aaKnown RBP7.65□□□□□ -1.18
SVIP-202ENST00000525670 GSTM4Q03013 218 aa7.65□□□□□ -1.18
SVIP-202ENST00000525670 EXOSC6Q5RKV6 272 aaKnown RBP7.65□□□□□ -1.18
SVIP-202ENST00000525670 INTS5Q6P9B9 1019 aaKnown RBP7.65□□□□□ -1.18
SVIP-202ENST00000525670 CCNJLQ8IV13 435 aa7.65□□□□□ -1.18
SVIP-202ENST00000525670 LMTK2Q8IWU2 1503 aa7.65□□□□□ -1.18
SVIP-202ENST00000525670 UBR1Q8IWV7 1749 aa7.65□□□□□ -1.18
SVIP-202ENST00000525670 TUT1Q9H6E5 874 aaKnown RBP7.65□□□□□ -1.18
SVIP-202ENST00000525670 SETD1BQ9UPS6 1966 aaKnown RBP7.65□□□□□ -1.18
SVIP-202ENST00000525670 A0A096LPE4 126 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 A0A1W2PPZ6 126 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 PRR19A6NJB7 356 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 KIAA1324LA8MWY0 1029 aaPredicted RBP7.64□□□□□ -1.19
SVIP-202ENST00000525670 TIAF1O95411 115 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 DLGAP3O95886 979 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 GRIK1P39086 918 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 ARHGAP4P98171 946 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 PDE3BQ13370 1112 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 TCF12Q99081 682 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 LIN7BQ9HAP6 207 aa7.64□□□□□ -1.19
SVIP-202ENST00000525670 ADGRB3O60242 1522 aa7.63□□□□□ -1.19
SVIP-202ENST00000525670 RAB3GAP2Q9H2M9 1393 aa7.63□□□□□ -1.19
SVIP-202ENST00000525670 NDUFB5O43674 189 aa7.63□□□□□ -1.19
SVIP-202ENST00000525670 MAP4P27816 1152 aaKnown RBP7.63□□□□□ -1.19
SVIP-202ENST00000525670 PCDH1Q08174 1060 aa7.63□□□□□ -1.19
SVIP-202ENST00000525670 KIAA0319Q5VV43 1072 aa7.63□□□□□ -1.19
SVIP-202ENST00000525670 CITED4Q96RK1 184 aa7.63□□□□□ -1.19
SVIP-202ENST00000525670 CLEC4MQ9H2X3 399 aaPredicted RBP7.63□□□□□ -1.19
SVIP-202ENST00000525670 CLTCL1P53675 1640 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms