RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 SNRKQ9NRH2 765 aa15.22■□□□□ 0.03
VEGFA-223ENST00000523125 TLR7Q9NYK1 1049 aaKnown RBP15.22■□□□□ 0.03
VEGFA-223ENST00000523125 DBNLQ9UJU6 430 aaKnown RBP15.22■□□□□ 0.03
VEGFA-223ENST00000523125 ATAD5Q96QE3 1844 aa15.22■□□□□ 0.03
VEGFA-223ENST00000523125 DDTLA6NHG4 134 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-223ENST00000523125 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.03
VEGFA-223ENST00000523125 MS4A1P11836 297 aa15.21■□□□□ 0.03
VEGFA-223ENST00000523125 PPIL2Q13356 520 aa15.21■□□□□ 0.03
VEGFA-223ENST00000523125 FAM43AQ8N2R8 423 aa15.21■□□□□ 0.03
VEGFA-223ENST00000523125 EAF2Q96CJ1 260 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-223ENST00000523125 ZNF512BQ96KM6 892 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-223ENST00000523125 RCAN3Q9UKA8 241 aa15.21■□□□□ 0.03
VEGFA-223ENST00000523125 SIPA1L1O43166 1804 aa15.21■□□□□ 0.03
VEGFA-223ENST00000523125 ZSWIM8A7E2V4 1837 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 CYP2E1P05181 493 aaPredicted RBP15.2■□□□□ 0.02
VEGFA-223ENST00000523125 LDHCP07864 332 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 SLURP2P0DP57 97 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 GSTO1P78417 241 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 CAP1Q01518 475 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 PPATQ06203 517 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 CCDC158Q5M9N0 1113 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 TTC39AQ5SRH9 613 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 NOL9Q5SY16 702 aaKnown RBP15.2■□□□□ 0.02
VEGFA-223ENST00000523125 CCDC8Q9H0W5 538 aaPredicted RBP15.2■□□□□ 0.02
VEGFA-223ENST00000523125 ZBTB40Q9NUA8 1239 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 RAI14Q9P0K7 980 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 LRP2BPQ9P2M1 347 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 HPS5Q9UPZ3 1129 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 EXOC6BQ9Y2D4 811 aa15.2■□□□□ 0.02
VEGFA-223ENST00000523125 NPM3O75607 178 aaKnown RBP15.19■□□□□ 0.02
VEGFA-223ENST00000523125 CETPP11597 493 aa15.19■□□□□ 0.02
VEGFA-223ENST00000523125 SNAPC2Q13487 334 aa15.19■□□□□ 0.02
VEGFA-223ENST00000523125 PICALMQ13492 652 aa15.19■□□□□ 0.02
VEGFA-223ENST00000523125 FBXO46Q6PJ61 603 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-223ENST00000523125 SIRT2Q8IXJ6 389 aa15.19■□□□□ 0.02
VEGFA-223ENST00000523125 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
VEGFA-223ENST00000523125 BTBD19C9JJ37 291 aa15.18■□□□□ 0.02
VEGFA-223ENST00000523125 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-223ENST00000523125 ZAP70P43403 619 aa15.18■□□□□ 0.02
VEGFA-223ENST00000523125 MOGSQ13724 837 aa15.18■□□□□ 0.02
VEGFA-223ENST00000523125 TAF1CQ15572 869 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-223ENST00000523125 OTOP1Q7RTM1 612 aa15.18■□□□□ 0.02
VEGFA-223ENST00000523125 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-223ENST00000523125 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-223ENST00000523125 PIH1D3Q9NQM4 214 aaKnown RBP15.18■□□□□ 0.02
VEGFA-223ENST00000523125 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
VEGFA-223ENST00000523125 KCNH4Q9UQ05 1017 aa15.18■□□□□ 0.02
VEGFA-223ENST00000523125 COL2A1P02458 1487 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-223ENST00000523125 MYH1P12882 1939 aa15.17■□□□□ 0.02
VEGFA-223ENST00000523125 SP3Q02447 781 aa15.17■□□□□ 0.02
VEGFA-223ENST00000523125 C20orf194Q5TEA3 1177 aa15.17■□□□□ 0.02
VEGFA-223ENST00000523125 ADGRA1Q86SQ6 560 aa15.17■□□□□ 0.02
VEGFA-223ENST00000523125 RPAP2Q8IXW5 612 aaPredicted RBP15.17■□□□□ 0.02
VEGFA-223ENST00000523125 CD99L2Q8TCZ2 262 aa15.17■□□□□ 0.02
VEGFA-223ENST00000523125 ZCCHC17Q9NP64 241 aaKnown RBP15.17■□□□□ 0.02
VEGFA-223ENST00000523125 PPP4CP60510 307 aa15.16■□□□□ 0.02
VEGFA-223ENST00000523125 NAA16Q6N069 864 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-223ENST00000523125 ERC1Q8IUD2 1116 aa15.16■□□□□ 0.02
VEGFA-223ENST00000523125 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-223ENST00000523125 ERO1AQ96HE7 468 aa15.16■□□□□ 0.02
VEGFA-223ENST00000523125 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
VEGFA-223ENST00000523125 TRIM17Q9Y577 477 aa15.16■□□□□ 0.02
VEGFA-223ENST00000523125 MGAMO43451 1857 aa15.15■□□□□ 0.02
VEGFA-223ENST00000523125 TBC1D12O60347 775 aa15.15■□□□□ 0.02
VEGFA-223ENST00000523125 SOX10P56693 466 aa15.15■□□□□ 0.02
VEGFA-223ENST00000523125 MLLT1Q03111 559 aaPredicted RBP15.15■□□□□ 0.02
VEGFA-223ENST00000523125 AACSQ86V21 672 aa15.15■□□□□ 0.02
VEGFA-223ENST00000523125 SCYL3Q8IZE3 742 aa15.15■□□□□ 0.02
VEGFA-223ENST00000523125 RHPN1Q8TCX5 695 aa15.15■□□□□ 0.02
VEGFA-223ENST00000523125 OSBPL5Q9H0X9 879 aaPredicted RBP15.15■□□□□ 0.02
VEGFA-223ENST00000523125 IL1RAPL2Q9NP60 686 aa15.15■□□□□ 0.02
VEGFA-223ENST00000523125 AATFQ9NY61 560 aaKnown RBP eCLIP15.15■□□□□ 0.02
VEGFA-223ENST00000523125 NDUFB9Q9Y6M9 179 aa15.15■□□□□ 0.02
VEGFA-223ENST00000523125 RBBP6Q7Z6E9 1792 aaKnown RBP15.14■□□□□ 0.01
VEGFA-223ENST00000523125 FAM196BA6NMK8 535 aa15.14■□□□□ 0.01
VEGFA-223ENST00000523125 TLR2O60603 784 aa15.14■□□□□ 0.01
VEGFA-223ENST00000523125 CTNND1O60716 968 aaKnown RBP15.14■□□□□ 0.01
VEGFA-223ENST00000523125 IGSF3O75054 1194 aa15.14■□□□□ 0.01
VEGFA-223ENST00000523125 PTPRAP18433 802 aa15.14■□□□□ 0.01
VEGFA-223ENST00000523125 HSP90AB4PQ58FF6 505 aa15.14■□□□□ 0.01
VEGFA-223ENST00000523125 ANKRD23Q86SG2 305 aa15.14■□□□□ 0.01
VEGFA-223ENST00000523125 TEX11Q8IYF3 940 aa15.14■□□□□ 0.01
VEGFA-223ENST00000523125 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.14■□□□□ 0.01
VEGFA-223ENST00000523125 ZHX2Q9Y6X8 837 aa15.14■□□□□ 0.01
VEGFA-223ENST00000523125 CXCL11O14625 94 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 PDE3AQ14432 1141 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 RRP1BQ14684 758 aaKnown RBP15.13■□□□□ 0.01
VEGFA-223ENST00000523125 GPAT2Q6NUI2 795 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 ANTXR1Q9H6X2 564 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 EFCC1Q9HA90 598 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 PTPN22Q9Y2R2 807 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 AFG3L2Q9Y4W6 797 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 ADGRA2Q96PE1 1338 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 BRCA2P51587 3418 aa15.13■□□□□ 0.01
VEGFA-223ENST00000523125 MKI67P46013 3256 aaKnown RBP15.12■□□□□ 0.01
VEGFA-223ENST00000523125 LOC285556D6RIA3 1793 aa15.12■□□□□ 0.01
VEGFA-223ENST00000523125 A0A0G2JLL6 359 aaPredicted RBP15.12■□□□□ 0.01
VEGFA-223ENST00000523125 PDHXO00330 501 aa15.12■□□□□ 0.01
VEGFA-223ENST00000523125 BAG3O95817 575 aa15.12■□□□□ 0.01
VEGFA-223ENST00000523125 PLCG2P16885 1265 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 648.3 ms