RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CHRNA5P30532 468 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 PARP10Q53GL7 1025 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 RNF20Q5VTR2 975 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 C9orf131Q5VYM1 1079 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 PRR5LQ6MZQ0 368 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 CC2D1AQ6P1N0 951 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-216ENST00000523088 BICDL1Q6ZP65 573 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 C16orf71Q8IYS4 520 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-216ENST00000523088 NDUFAF2Q8N183 169 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 SVIPQ8NHG7 77 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 PRIMPOLQ96LW4 560 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 MAK16Q9BXY0 300 aaKnown RBP8.73□□□□□ -1.01
HDAC3-216ENST00000523088 LRRC27Q9C0I9 530 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 MUC3BQ9H195 1237 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 UNC45AQ9H3U1 944 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 TSPY26PQ9H489 355 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.73□□□□□ -1.01
HDAC3-216ENST00000523088 TMEM63CQ9P1W3 806 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
HDAC3-216ENST00000523088 LZTS1Q9Y250 596 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 LTBP3Q9NS15 1303 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 ANKRD36CQ5JPF3 1778 aa8.73□□□□□ -1.01
HDAC3-216ENST00000523088 FAM25EA8MYX2 175 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 CHL1O00533 1208 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 KCNQ3O43525 872 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 BBOX1O75936 387 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 ECEL1O95672 775 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 MYBL2P10244 700 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 IBSPP21815 317 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-216ENST00000523088 CBX1P83916 185 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 KCTD2Q14681 263 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 RABEP1Q15276 862 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 MAPRE1Q15691 268 aaKnown RBP8.72□□□□□ -1.01
HDAC3-216ENST00000523088 MUM1L1Q5H9M0 696 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 TTC30AQ86WT1 665 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 CCDC26Q8TAB7 109 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 MASTLQ96GX5 879 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 RBSNQ9H1K0 784 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 COMMD8Q9NX08 183 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 RNF181Q9P0P0 153 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 TSPYL4Q9UJ04 414 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 TMCC3Q9ULS5 477 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 ATP8A1Q9Y2Q0 1164 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 RNF123Q5XPI4 1314 aa8.72□□□□□ -1.01
HDAC3-216ENST00000523088 A0A1B0GUL7 405 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 HOXA2O43364 376 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 C21orf2O43822 256 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 ZMYND10O75800 440 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 HOXB7P09629 217 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 NPR1P16066 1061 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 HSPA6P17066 643 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 MAP2K2P36507 400 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 PRPHP41219 470 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 TMPOP42166 694 aaKnown RBP8.71□□□□□ -1.02
HDAC3-216ENST00000523088 EIF4A1P60842 406 aaKnown RBP8.71□□□□□ -1.02
HDAC3-216ENST00000523088 NUCB2P80303 420 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 SFSWAPQ12872 951 aaKnown RBP8.71□□□□□ -1.02
HDAC3-216ENST00000523088 DDX10Q13206 875 aaKnown RBP8.71□□□□□ -1.02
HDAC3-216ENST00000523088 PTK7Q13308 1070 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 FAM161AQ3B820 660 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 ACBD5Q5T8D3 534 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-216ENST00000523088 STAG1Q8WVM7 1258 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 RUNDC1Q96C34 613 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 EXOC1Q9NV70 894 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 CLIP2Q9UDT6 1046 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 MAFFQ9ULX9 164 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 NIP7Q9Y221 180 aaKnown RBP eCLIP8.71□□□□□ -1.02
HDAC3-216ENST00000523088 MAP3K15Q6ZN16 1313 aa8.71□□□□□ -1.02
HDAC3-216ENST00000523088 SLX4Q8IY92 1834 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 PPFIA3O75145 1194 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 KRT38O76015 456 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 SRGNP10124 158 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 HOXA10P31260 410 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-216ENST00000523088 DEUP1Q05D60 604 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 FSTL1Q12841 308 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 TRIM29Q14134 588 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 NOM1Q5C9Z4 860 aaKnown RBP8.7□□□□□ -1.02
HDAC3-216ENST00000523088 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 LRRC49Q8IUZ0 686 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 CHCHD4Q8N4Q1 142 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 ANKRD20A12PQ8NF67 263 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 TAF4BQ92750 862 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 ZBTB10Q96DT7 871 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 TAOK3Q9H2K8 898 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 DHX36Q9H2U1 1008 aaKnown RBP8.7□□□□□ -1.02
HDAC3-216ENST00000523088 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 WDR90Q96KV7 1748 aa8.7□□□□□ -1.02
HDAC3-216ENST00000523088 SCN4AP35499 1836 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 KLRG2A4D1S0 409 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-216ENST00000523088 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 ATG7O95352 703 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 MSNP26038 577 aaKnown RBP8.69□□□□□ -1.02
HDAC3-216ENST00000523088 ABL2P42684 1182 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 TBX4P57082 545 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 PRPF4BQ13523 1007 aaKnown RBP8.69□□□□□ -1.02
HDAC3-216ENST00000523088 RBBP5Q15291 538 aaKnown RBP8.69□□□□□ -1.02
HDAC3-216ENST00000523088 SEPT7Q16181 437 aaKnown RBP8.69□□□□□ -1.02
HDAC3-216ENST00000523088 CCDC93Q567U6 631 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 EGFLAMQ63HQ2 1017 aa8.69□□□□□ -1.02
HDAC3-216ENST00000523088 PRPF40BQ6NWY9 871 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms