RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-217	ENST00000522117	FANCL	Q9NW38	375 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	BIN1	O00499	593 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	NDUFAB1	O14561	156 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	RPSA	P08865	295 aa	Known RBP	13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	PDE6B	P35913	854 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	AMPH	P49418	695 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	MTF1	Q14872	753 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	E2F5	Q15329	346 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	SDF4	Q9BRK5	362 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	ANAPC4	Q9UJX5	808 aa		13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	TPX2	Q9ULW0	747 aa	Known RBP	13.65	□□□□□ -0.22
SPIDR-217	ENST00000522117	GNAI2	P04899	355 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	GBP2	P32456	591 aa	Predicted RBP	13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	NECTIN1	Q15223	517 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	CFAP100	Q494V2	611 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	ABCC6	O95255	1503 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	SPATA31D1	Q6ZQQ2	1576 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	SERPINC1	P01008	464 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	CYB5D1	Q6P9G0	228 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	USP28	Q96RU2	1077 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	SLC39A2	Q9NP94	309 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	LZTFL1	Q9NQ48	299 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	MYH15	Q9Y2K3	1946 aa		13.64	□□□□□ -0.23
SPIDR-217	ENST00000522117	NAP1L1	P55209	391 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	WHAMMP3	Q1A5X7	153 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	IL1RAPL2	Q9NP60	686 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	BATF3	Q9NR55	127 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	TPD52L2	O43399	206 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	PYGL	P06737	847 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	ADK	P55263	362 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	SKOR1	P84550	965 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	FOXD4	Q12950	439 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	TOB2	Q14106	344 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	MYSM1	Q5VVJ2	828 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	KIAA1328	Q86T90	577 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	CCDC50	Q8IVM0	306 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	MKL1	Q969V6	931 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	TCEANC2	Q96MN5	208 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	RTEL1	Q9NZ71	1219 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	CRYBG1	Q9Y4K1	1723 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	PAX3	P23760	479 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	ATP8B2	P98198	1209 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	STK3	Q13188	491 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	SF3B2	Q13435	895 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	ACCSL	Q4AC99	568 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	ZNF569	Q5MCW4	686 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	THEMIS2	Q5TEJ8	643 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	WAPL	Q7Z5K2	1190 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	FUK	Q8N0W3	1084 aa		13.63	□□□□□ -0.23
SPIDR-217	ENST00000522117	RIMS2	Q9UQ26	1411 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	CD163L1	Q9NR16	1453 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	CDR1	P51861	262 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	USP14	P54578	494 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	PIP4K2B	P78356	416 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	HSP90AB2P	Q58FF8	381 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	RPUSD2	Q8IZ73	545 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	MRPS27	Q92552	414 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	GDAP1L1	Q96MZ0	367 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	A2ML1	A8K2U0	1454 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117		A0A1B0GVL5	298 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	CTAGE9	A4FU28	777 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	KIF5C	O60282	957 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	HMOX1	P09601	288 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	CCDC175	P0C221	793 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	NDUFA8	P51970	172 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	RNF187	Q5TA31	235 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	MICALCL	Q6ZW33	695 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	SCLT1	Q96NL6	688 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	CRACR2A	Q9BSW2	395 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	LMCD1	Q9NZU5	365 aa		13.62	□□□□□ -0.23
SPIDR-217	ENST00000522117	ANKRD26	Q9UPS8	1709 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117		H3BQV1	296 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	LTK	P29376	864 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	IFFO2	Q5TF58	517 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	CREB3L3	Q68CJ9	461 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	NFXL1	Q6ZNB6	911 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	CNTROB	Q8N137	903 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	SLC35F6	Q8N357	371 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	PDILT	Q8N807	584 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	HOOK2	Q96ED9	719 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	7e-6	■■■■■ 27.7
SPIDR-217	ENST00000522117	ADGRG1	Q9Y653	693 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117		A0A1W2PP64	1363 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	TULP4	Q9NRJ4	1543 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	FAM83G	A6ND36	823 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	ME1	P48163	572 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	PDCL	Q13371	301 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	FILIP1L	Q4L180	1135 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	NAA35	Q5VZE5	725 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	MIS18BP1	Q6P0N0	1132 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	ARHGEF25	Q86VW2	580 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	RSRC1	Q96IZ7	334 aa	Known RBP	13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	CABP2	Q9NPB3	220 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	MYO6	Q9UM54	1294 aa		13.61	□□□□□ -0.23
SPIDR-217	ENST00000522117	SETD1B	Q9UPS6	1966 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-217	ENST00000522117		F6X3S4	739 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms