RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 HRASLS5Q96KN8 279 aa6.94□□□□□ -1.3
HDAC2-208ENST00000520746 NDUFB5O43674 189 aa6.93□□□□□ -1.3
HDAC2-208ENST00000520746 GADD45BO75293 160 aaPredicted RBP6.93□□□□□ -1.3
HDAC2-208ENST00000520746 NEFMP07197 916 aa6.93□□□□□ -1.3
HDAC2-208ENST00000520746 SERPINB4P48594 390 aa6.93□□□□□ -1.3
HDAC2-208ENST00000520746 PDE3BQ13370 1112 aa6.93□□□□□ -1.3
HDAC2-208ENST00000520746 PKN1Q16512 942 aa6.93□□□□□ -1.3
HDAC2-208ENST00000520746 PDZD3Q86UT5 571 aa6.93□□□□□ -1.3
HDAC2-208ENST00000520746 KSR1Q8IVT5 923 aa6.93□□□□□ -1.3
HDAC2-208ENST00000520746 PCOLCE2Q9UKZ9 415 aa6.93□□□□□ -1.3
HDAC2-208ENST00000520746 TMEM265A0A087WTH1 108 aa6.92□□□□□ -1.3
HDAC2-208ENST00000520746 EIF1AYO14602 144 aaKnown RBP6.92□□□□□ -1.3
HDAC2-208ENST00000520746 GPR182O15218 404 aa6.92□□□□□ -1.3
HDAC2-208ENST00000520746 IGHA2P01877 340 aa6.92□□□□□ -1.3
HDAC2-208ENST00000520746 GRM2Q14416 872 aa6.92□□□□□ -1.3
HDAC2-208ENST00000520746 ANGEL2Q5VTE6 544 aaKnown RBP6.92□□□□□ -1.3
HDAC2-208ENST00000520746 ARHGAP27Q6ZUM4 889 aa6.92□□□□□ -1.3
HDAC2-208ENST00000520746 ITIH2P19823 946 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 MESP2Q0VG99 397 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 TOP6BLQ8N6T0 577 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 FLAD1Q8NFF5 587 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 ISL2Q96A47 359 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 KRTAP4-2Q9BYR5 136 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 TNKS2Q9H2K2 1166 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 TRAK1Q9UPV9 953 aa6.91□□□□□ -1.3
HDAC2-208ENST00000520746 HNRNPUQ00839 825 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDAC2-208ENST00000520746 SLC23A3Q6PIS1 610 aa6.9□□□□□ -1.3
HDAC2-208ENST00000520746 KCNB2Q92953 911 aa6.9□□□□□ -1.3
HDAC2-208ENST00000520746 PRDM7Q9NQW5 492 aa6.9□□□□□ -1.3
HDAC2-208ENST00000520746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.9□□□□□ -1.3
HDAC2-208ENST00000520746 GPN3Q9UHW5 284 aaPredicted RBP6.9□□□□□ -1.3
HDAC2-208ENST00000520746 STK35Q8TDR2 534 aa6.89□□□□□ -1.31
HDAC2-208ENST00000520746 EPS8L3Q8TE67 593 aaKnown RBP6.89□□□□□ -1.31
HDAC2-208ENST00000520746 HEXIM2Q96MH2 286 aaKnown RBP6.89□□□□□ -1.31
HDAC2-208ENST00000520746 CITED4Q96RK1 184 aa6.89□□□□□ -1.31
HDAC2-208ENST00000520746 SLC38A3Q99624 504 aa6.89□□□□□ -1.31
HDAC2-208ENST00000520746 NIF3L1Q9GZT8 377 aa6.89□□□□□ -1.31
HDAC2-208ENST00000520746 FCGRTP55899 365 aa6.88□□□□□ -1.31
HDAC2-208ENST00000520746 PPP2R3AQ06190 1150 aa6.88□□□□□ -1.31
HDAC2-208ENST00000520746 ZC3H12AQ5D1E8 599 aaKnown RBP6.88□□□□□ -1.31
HDAC2-208ENST00000520746 DTHD1Q6ZMT9 781 aa6.88□□□□□ -1.31
HDAC2-208ENST00000520746 FAM214BQ7L5A3 538 aa6.88□□□□□ -1.31
HDAC2-208ENST00000520746 ZSWIM9Q86XI8 627 aa6.88□□□□□ -1.31
HDAC2-208ENST00000520746 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC2-208ENST00000520746 FAM84AQ96KN4 292 aa6.88□□□□□ -1.31
HDAC2-208ENST00000520746 TMEM39AQ9NV64 488 aa6.88□□□□□ -1.31
HDAC2-208ENST00000520746 SNX11Q9Y5W9 270 aa6.88□□□□□ -1.31
HDAC2-208ENST00000520746 ZNF503-AS2A6NEH8 195 aa6.87□□□□□ -1.31
HDAC2-208ENST00000520746 LRRC10BA6NIK2 292 aa6.87□□□□□ -1.31
HDAC2-208ENST00000520746 ERVK-24P63145 666 aa6.87□□□□□ -1.31
HDAC2-208ENST00000520746 CILP2Q8IUL8 1156 aa6.87□□□□□ -1.31
HDAC2-208ENST00000520746 SULF2Q8IWU5 870 aa6.87□□□□□ -1.31
HDAC2-208ENST00000520746 RNF214Q8ND24 703 aa6.87□□□□□ -1.31
HDAC2-208ENST00000520746 CSRNP1Q96S65 589 aa6.87□□□□□ -1.31
HDAC2-208ENST00000520746 SSU72Q9NP77 194 aaKnown RBP6.87□□□□□ -1.31
HDAC2-208ENST00000520746 B4GALNT3Q6L9W6 998 aa6.86□□□□□ -1.31
HDAC2-208ENST00000520746 SPACA3Q8IXA5 215 aa6.86□□□□□ -1.31
HDAC2-208ENST00000520746 RETREG2Q8NC44 543 aa6.86□□□□□ -1.31
HDAC2-208ENST00000520746 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.85□□□□□ -1.31
HDAC2-208ENST00000520746 ARNTP27540 789 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 IKZF1Q13422 519 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 KCNMB1Q16558 191 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 MLANAQ16655 118 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 MAP1SQ66K74 1059 aaPredicted RBP6.85□□□□□ -1.31
HDAC2-208ENST00000520746 PI16Q6UXB8 463 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 HOMEZQ8IX15 550 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 BHLHE22Q8NFJ8 381 aaPredicted RBP6.85□□□□□ -1.31
HDAC2-208ENST00000520746 TMC1Q8TDI8 760 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 GPBAR1Q8TDU6 330 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 ASB11Q8WXH4 323 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 USTQ9Y2C2 406 aa6.85□□□□□ -1.31
HDAC2-208ENST00000520746 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
HDAC2-208ENST00000520746 NTF4P34130 210 aa6.84□□□□□ -1.31
HDAC2-208ENST00000520746 ZP2Q05996 745 aa6.84□□□□□ -1.31
HDAC2-208ENST00000520746 ZNF252P-AS1Q0IIN9 211 aa6.84□□□□□ -1.31
HDAC2-208ENST00000520746 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
HDAC2-208ENST00000520746 UBE3DQ7Z6J8 389 aa6.84□□□□□ -1.31
HDAC2-208ENST00000520746 ALKBH8Q96BT7 664 aaKnown RBP6.84□□□□□ -1.31
HDAC2-208ENST00000520746 FAM53CQ9NYF3 392 aa6.84□□□□□ -1.31
HDAC2-208ENST00000520746 GTF2IRD1Q9UHL9 959 aa6.84□□□□□ -1.31
HDAC2-208ENST00000520746 CTNND2Q9UQB3 1225 aa6.84□□□□□ -1.31
HDAC2-208ENST00000520746 NME2P22392 152 aa6.83□□□□□ -1.32
HDAC2-208ENST00000520746 NKPD1Q17RQ9 610 aa6.83□□□□□ -1.32
HDAC2-208ENST00000520746 PPM1JQ5JR12 505 aa6.83□□□□□ -1.32
HDAC2-208ENST00000520746 LIN37Q96GY3 246 aaPredicted RBP6.83□□□□□ -1.32
HDAC2-208ENST00000520746 PRDM10Q9NQV6 1147 aa6.83□□□□□ -1.32
HDAC2-208ENST00000520746 CACNA2D2Q9NY47 1150 aa6.83□□□□□ -1.32
HDAC2-208ENST00000520746 PITPNM2Q9BZ72 1349 aa6.82□□□□□ -1.32
HDAC2-208ENST00000520746 XRCC5P13010 732 aaKnown RBP6.82□□□□□ -1.32
HDAC2-208ENST00000520746 FYB2Q5VWT5 728 aa6.82□□□□□ -1.32
HDAC2-208ENST00000520746 MPRIPQ6WCQ1 1025 aa6.82□□□□□ -1.32
HDAC2-208ENST00000520746 DMRTB1Q96MA1 342 aa6.82□□□□□ -1.32
HDAC2-208ENST00000520746 BCO2Q9BYV7 579 aa6.82□□□□□ -1.32
HDAC2-208ENST00000520746 RAP1GAPP47736 663 aa6.81□□□□□ -1.32
HDAC2-208ENST00000520746 PDE4CQ08493 712 aa6.81□□□□□ -1.32
HDAC2-208ENST00000520746 ACSBG1Q96GR2 724 aa6.81□□□□□ -1.32
HDAC2-208ENST00000520746 EMILIN2Q9BXX0 1053 aa6.81□□□□□ -1.32
HDAC2-208ENST00000520746 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms