RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 GAS8-AS1O95177 125 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 ADRA1BP35368 520 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 GJA5P36382 358 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 SELENOPP49908 381 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 SIK1P57059 783 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 COL10A1Q03692 680 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 COL9A2Q14055 689 aaPredicted RBP0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 CSPP1Q1MSJ5 1256 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 PRR16Q569H4 304 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 NUTM2DQ5VT03 806 aaPredicted RBP0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 RSBN1LQ6PCB5 846 aaPredicted RBP0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 LIPIQ6XZB0 460 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 NPAS4Q8IUM7 802 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 NUTM2AQ8IVF1 878 aaPredicted RBP0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 FUBP1Q96AE4 644 aaKnown RBP0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 ZNF503Q96F45 646 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 NSUN5Q96P11 429 aaKnown RBP0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 SSBP3Q9BWW4 388 aaPredicted RBP0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 ZNF580Q9UK33 172 aa0.47□□□□□ -2.33
SNORA40.16-201ENST00000517238 OPLAHO14841 1288 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 HPXP02790 462 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 EPHA1P21709 976 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 TARSP26639 723 aaKnown RBP0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 HILS1P60008 231 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 SSBP2P81877 361 aaPredicted RBP0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 PTH1RQ03431 593 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 HYAL1Q12794 435 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 PDE3BQ13370 1112 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 R3HDM1Q15032 1099 aaKnown RBP0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 RBM26Q5T8P6 1007 aaKnown RBP0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 PRIMA1Q86XR5 153 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 MZB1Q8WU39 189 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 PPP1R13LQ8WUF5 828 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 L3MBTL2Q969R5 705 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 USP26Q9BXU7 913 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 SEMA4AQ9H3S1 761 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 RIOX1Q9H6W3 641 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 C19orf44Q9H6X5 657 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 CNTD2Q9H8S5 307 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 CWC22Q9HCG8 908 aaKnown RBP0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 CD248Q9HCU0 757 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 GPCPD1Q9NPB8 672 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 IQSEC3Q9UPP2 1182 aaPredicted RBP0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 USP3Q9Y6I4 520 aa0.46□□□□□ -2.34
SNORA40.16-201ENST00000517238 OR14I1A6ND48 311 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 CDK2AP1O14519 115 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 INHAP05111 366 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 ADH5P11766 374 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 PIP4K2BP78356 416 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 NBPF9Q3BBW0 867 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 NRN1LQ496H8 165 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 RNF207Q6ZRF8 634 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 DYMQ7RTS9 669 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 BTLAQ7Z6A9 289 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 SPACA3Q8IXA5 215 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 NLGN1Q8N2Q7 840 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 SPEM1Q8N4L4 309 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 ZNF280CQ8ND82 737 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 PIWIL2Q8TC59 973 aaKnown RBP0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 C7orf43Q8WVR3 580 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 SLC7A3Q8WY07 619 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 LARP4BQ92615 738 aaKnown RBP0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 ZMYND15Q9H091 742 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 ATP13A1Q9HD20 1204 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 FAM105AQ9NUU6 356 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 WDR70Q9NW82 654 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 TLR7Q9NYK1 1049 aaKnown RBP0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 CRCT1Q9UGL9 99 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 TMEM59LQ9UK28 342 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 ZNF232Q9UNY5 417 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 YBX2Q9Y2T7 364 aaKnown RBP0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 RTCBQ9Y3I0 505 aaKnown RBP0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 TESMINQ9Y4I5 508 aa0.45□□□□□ -2.34
SNORA40.16-201ENST00000517238 DNAJC25-GNG10A0A024R161 153 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 NPEPPSL1A6NEC2 478 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 LEFTY1O75610 366 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 CLCN1P35523 988 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 CLCN7P51798 805 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 CDR1P51861 262 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 CAP1Q01518 475 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 PLCB3Q01970 1234 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 NR6A1Q15406 480 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 RALGPS1Q5JS13 557 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 EXOSC6Q5RKV6 272 aaKnown RBP0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 CEP135Q66GS9 1140 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 FIBCD1Q8N539 461 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 ZDHHC1Q8WTX9 485 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 WNT8BQ93098 351 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 SUSD3Q96L08 255 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 TTPALQ9BTX7 342 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 DNAJC25Q9H1X3 360 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 OSGEPQ9NPF4 335 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 SLC2A4RGQ9NR83 387 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 WWOXQ9NZC7 414 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 SERTAD1Q9UHV2 236 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 LRP12Q9Y561 859 aa0.44□□□□□ -2.34
SNORA40.16-201ENST00000517238 MYADML2A6NDP7 307 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 A6NHS1 94 aa0.43□□□□□ -2.34
SNORA40.16-201ENST00000517238 A6NJY4 79 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms