RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 NRXN1Q9ULB1 1477 aa9.74□□□□□ -0.85
RFC1-213ENST00000512275 SETD1BQ9UPS6 1966 aaKnown RBP9.74□□□□□ -0.85
RFC1-213ENST00000512275 ZBTB42B2RXF5 422 aa9.74□□□□□ -0.85
RFC1-213ENST00000512275 GRIA4P48058 902 aa9.74□□□□□ -0.85
RFC1-213ENST00000512275 CCDC85BQ15834 202 aaPredicted RBP9.74□□□□□ -0.85
RFC1-213ENST00000512275 DTHD1Q6ZMT9 781 aa9.74□□□□□ -0.85
RFC1-213ENST00000512275 ARMC5Q96C12 935 aa9.74□□□□□ -0.85
RFC1-213ENST00000512275 HHIPQ96QV1 700 aa9.74□□□□□ -0.85
RFC1-213ENST00000512275 ADGRF5Q8IZF2 1346 aa9.74□□□□□ -0.85
RFC1-213ENST00000512275 RIMS2Q9UQ26 1411 aa9.73□□□□□ -0.85
RFC1-213ENST00000512275 TRPA1O75762 1119 aa9.73□□□□□ -0.85
RFC1-213ENST00000512275 CTBSQ01459 385 aa9.73□□□□□ -0.85
RFC1-213ENST00000512275 ARID5AQ03989 594 aa9.73□□□□□ -0.85
RFC1-213ENST00000512275 PAK2Q13177 524 aa9.73□□□□□ -0.85
RFC1-213ENST00000512275 SV2BQ7L1I2 683 aa9.73□□□□□ -0.85
RFC1-213ENST00000512275 NXPE3Q969Y0 559 aa9.73□□□□□ -0.85
RFC1-213ENST00000512275 TRIM56Q9BRZ2 755 aaKnown RBP9.73□□□□□ -0.85
RFC1-213ENST00000512275 ROCK2O75116 1388 aaKnown RBP9.73□□□□□ -0.85
RFC1-213ENST00000512275 SETD1AO15047 1707 aaKnown RBP9.73□□□□□ -0.85
RFC1-213ENST00000512275 NRXN3Q9Y4C0 1643 aa9.72□□□□□ -0.85
RFC1-213ENST00000512275 ZNF468Q5VIY5 522 aaPredicted RBP9.72□□□□□ -0.85
RFC1-213ENST00000512275 SCARF2Q96GP6 870 aaPredicted RBP9.72□□□□□ -0.85
RFC1-213ENST00000512275 TRERF1Q96PN7 1200 aa9.72□□□□□ -0.85
RFC1-213ENST00000512275 ZFYVE1Q9HBF4 777 aa9.72□□□□□ -0.85
RFC1-213ENST00000512275 AKAP2Q9Y2D5 859 aa9.72□□□□□ -0.85
RFC1-213ENST00000512275 POLR1AO95602 1720 aaPredicted RBP9.72□□□□□ -0.85
RFC1-213ENST00000512275 RPGRIP1LQ68CZ1 1315 aa9.72□□□□□ -0.85
RFC1-213ENST00000512275 PIK3C2GO75747 1445 aa9.72□□□□□ -0.85
RFC1-213ENST00000512275 ZFYVE9O95405 1425 aa9.72□□□□□ -0.85
RFC1-213ENST00000512275 LOC102724428A0A0B4J2F2 783 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 FBXO24O75426 580 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 FGRP09769 529 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 DNAJA1P31689 397 aaKnown RBP9.71□□□□□ -0.86
RFC1-213ENST00000512275 SIK1P57059 783 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 PWP1Q13610 501 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 SPRED3Q2MJR0 410 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 RASGRP4Q8TDF6 673 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 GPRASP2Q96D09 838 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 TMEM74Q96NL1 305 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 HIRIP3Q9BW71 556 aaPredicted RBP9.71□□□□□ -0.86
RFC1-213ENST00000512275 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 KCNQ5Q9NR82 932 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 ADAMTS1Q9UHI8 967 aa9.71□□□□□ -0.86
RFC1-213ENST00000512275 C2CD2LO14523 706 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 RLBP1P12271 317 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 ATP11AP98196 1134 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 RPS26P11Q5JNZ5 115 aaPredicted RBP9.7□□□□□ -0.86
RFC1-213ENST00000512275 KANK3Q6NY19 840 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 MCF2L2Q86YR7 1114 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 RHOVQ96L33 236 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 RASSF4Q9H2L5 321 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 ZNF576Q9H609 170 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 ENAMQ9NRM1 1142 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 USP47Q96K76 1375 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 TMEM2Q9UHN6 1383 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 SLIT1O75093 1534 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 ASXL1Q8IXJ9 1541 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 SETBP1Q9Y6X0 1596 aa9.7□□□□□ -0.86
RFC1-213ENST00000512275 A0A096LPE4 126 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 A0A1W2PPZ6 126 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 J3QW42 95 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 PDE2AO00408 941 aaPredicted RBP9.69□□□□□ -0.86
RFC1-213ENST00000512275 SIN3BO75182 1162 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 CELA3AP09093 270 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 ATF4P18848 351 aaPredicted RBP9.69□□□□□ -0.86
RFC1-213ENST00000512275 MLLT1Q03111 559 aaPredicted RBP9.69□□□□□ -0.86
RFC1-213ENST00000512275 GPRASP1Q5JY77 1395 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 TPTE2Q6XPS3 522 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 SYT9Q86SS6 491 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 ARHGEF28Q8N1W1 1705 aaKnown RBP9.69□□□□□ -0.86
RFC1-213ENST00000512275 PHC3Q8NDX5 983 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 DHX38Q92620 1227 aaKnown RBP9.69□□□□□ -0.86
RFC1-213ENST00000512275 ACDQ96AP0 544 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 SPACA7Q96KW9 195 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 SPON2Q9BUD6 331 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 CARD11Q9BXL7 1154 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 CEP44Q9C0F1 390 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 DNAJB12Q9NXW2 375 aaKnown RBP9.69□□□□□ -0.86
RFC1-213ENST00000512275 ALKQ9UM73 1620 aa9.69□□□□□ -0.86
RFC1-213ENST00000512275 ADGRB1O14514 1584 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 ARHGAP23Q9P227 1491 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 ENC1O14682 589 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 HSPA5P11021 654 aaKnown RBP9.68□□□□□ -0.86
RFC1-213ENST00000512275 BCRP11274 1271 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 MX2P20592 715 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 PCSK7Q16549 785 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 RELL1Q8IUW5 271 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 KIAA0825Q8IV33 1275 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 NECAB3Q96P71 396 aaPredicted RBP9.68□□□□□ -0.86
RFC1-213ENST00000512275 AVENQ9NQS1 362 aaPredicted RBP9.68□□□□□ -0.86
RFC1-213ENST00000512275 PRR12Q9ULL5 1215 aa9.68□□□□□ -0.86
RFC1-213ENST00000512275 QRICH2Q9H0J4 1663 aa9.67□□□□□ -0.86
RFC1-213ENST00000512275 F6X3S4 739 aa9.67□□□□□ -0.86
RFC1-213ENST00000512275 GARTP22102 1010 aa9.67□□□□□ -0.86
RFC1-213ENST00000512275 LIG3P49916 1009 aa9.67□□□□□ -0.86
RFC1-213ENST00000512275 FAAP100Q0VG06 881 aa9.67□□□□□ -0.86
RFC1-213ENST00000512275 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
RFC1-213ENST00000512275 TNFRSF25Q93038 417 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms