RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 HPSEQ9Y251 543 aa20.72■□□□□ 0.91
CCHCR1-228ENST00000509552 SLC4A4Q9Y6R1 1079 aa20.72■□□□□ 0.91
CCHCR1-228ENST00000509552 PNPLA7Q6ZV29 1317 aa20.72■□□□□ 0.91
CCHCR1-228ENST00000509552 SLIT2O94813 1529 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 ERICH2A1L162 156 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 ATP6V1AP38606 617 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 STAG1Q8WVM7 1258 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 MAP3K14Q99558 947 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 DOCK2Q92608 1830 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 IFNAR1P17181 557 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 CRKLP46109 303 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 BCAMP50895 628 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 DHX8Q14562 1220 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 SAFBQ15424 915 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 RRP12Q5JTH9 1297 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 TRIM22Q8IYM9 498 aa20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 CDCA7Q9BWT1 371 aaPredicted RBP20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 OSBPL5Q9H0X9 879 aaPredicted RBP20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-228ENST00000509552 CUTAO60888 179 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 CCZ1BP86790 482 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 CCZ1P86791 482 aaPredicted RBP20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 WTAPQ15007 396 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 CEP135Q66GS9 1140 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 SHC4Q6S5L8 630 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 LCORLQ8N3X6 602 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 CCDC94Q9BW85 323 aaPredicted RBP20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 LRP2BPQ9P2M1 347 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 FAM237AA0A1B0GTK4 181 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 IKBKBO14920 756 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 PRKAB2O43741 272 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 RESP18Q5W5W9 173 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 NBPF11Q86T75 865 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 TMTC2Q8N394 836 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 XPO4Q9C0E2 1151 aaKnown RBP20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 RNF41Q9H4P4 317 aaPredicted RBP20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 IFNKQ9P0W0 207 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 TUBE1Q9UJT0 475 aa20.7■□□□□ 0.9
CCHCR1-228ENST00000509552 TIAM2Q8IVF5 1701 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 DOT1LQ8TEK3 1739 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 NID2Q14112 1375 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 CCDC112Q8NEF3 446 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 MTA3Q9BTC8 594 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 RTL9Q8NET4 1388 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 CHD4Q14839 1912 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 CAMTA2O94983 1202 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 PTPN14Q15678 1187 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 RTN1Q16799 776 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 NOSTRINQ8IVI9 506 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 CCDC150Q8NCX0 1101 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 ARID3AQ99856 593 aa20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 NIP7Q9Y221 180 aaKnown RBP eCLIP20.69■□□□□ 0.9
CCHCR1-228ENST00000509552 CCDC196A0A1B0GTZ2 297 aa20.68■□□□□ 0.9
CCHCR1-228ENST00000509552 TACC3Q9Y6A5 838 aa20.68■□□□□ 0.9
CCHCR1-228ENST00000509552 NCAPHQ15003 741 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 DDB1Q16531 1140 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 ECM29Q5VYK3 1845 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 NRDCO43847 1150 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 MMP1P03956 469 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 CHRNDQ07001 517 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 ISM2Q6H9L7 571 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 TMC6Q7Z403 805 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 KRI1Q8N9T8 703 aaKnown RBP20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 ZNF592Q92610 1267 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 CLIC6Q96NY7 704 aa20.67■□□□□ 0.9
CCHCR1-228ENST00000509552 LOC102724428A0A0B4J2F2 783 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 NTSR2O95665 410 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 SIK1P57059 783 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 SYCP1Q15431 976 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 MIGA1Q8NAN2 632 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 ANKRD7Q92527 254 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 ZKSCAN3Q9BRR0 538 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 KCND1Q9NSA2 647 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 OLFM4Q6UX06 510 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 PDCL2Q8N4E4 241 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 CNNM3Q8NE01 707 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 HOOK1Q9UJC3 728 aaKnown RBP20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 KCNH3Q9ULD8 1083 aa20.66■□□□□ 0.9
CCHCR1-228ENST00000509552 WNK3Q9BYP7 1800 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 USP27XA6NNY8 438 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 DEXIO95424 95 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 RCAN1P53805 252 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 PNOCQ13519 176 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 NYAP1Q6ZVC0 841 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 DIS3L2Q8IYB7 885 aaKnown RBP20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 CCAR2Q8N163 923 aaKnown RBP20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 ACSBG1Q96GR2 724 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 CDC5LQ99459 802 aaKnown RBP20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 UBAC1Q9BSL1 405 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 BTBD18B2RXH4 712 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 UBE2Q2LH0YL09 131 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 CYP7A1P22680 504 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 SFPQP23246 707 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 LMOD1P29536 600 aaPredicted RBP20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 FANCCQ00597 558 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 PPARAQ07869 468 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 KRBA2Q6ZNG9 492 aa20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 FOXP1Q9H334 677 aaPredicted RBP20.65■□□□□ 0.9
CCHCR1-228ENST00000509552 MYL5Q02045 173 aa20.64■□□□□ 0.89
CCHCR1-228ENST00000509552 RILPL1Q5EBL4 403 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms