RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 GAS2L3Q86XJ1 694 aa28.93■■■□□ 2.22
DHFR-203ENST00000505337 TMEM87BQ96K49 555 aa28.93■■■□□ 2.22
DHFR-203ENST00000505337 TMEM63CQ9P1W3 806 aa28.93■■■□□ 2.22
DHFR-203ENST00000505337 NAP1L2Q9ULW6 460 aaPredicted RBP28.93■■■□□ 2.22
DHFR-203ENST00000505337 SBF1O95248 1867 aa28.93■■■□□ 2.22
DHFR-203ENST00000505337 NAV1Q8NEY1 1877 aa28.93■■■□□ 2.22
DHFR-203ENST00000505337 MECOMQ03112 1051 aa28.92■■■□□ 2.22
DHFR-203ENST00000505337 FAM184AQ8NB25 1140 aa28.92■■■□□ 2.22
DHFR-203ENST00000505337 KIF3AQ9Y496 699 aa28.92■■■□□ 2.22
DHFR-203ENST00000505337 GPSM2P81274 684 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 FERMT3Q86UX7 667 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 CRAMP1Q96RY5 1269 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 RBM27Q9P2N5 1060 aaKnown RBP28.91■■■□□ 2.22
DHFR-203ENST00000505337 FIBPO43427 364 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 IGSF3O75054 1194 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 PRDX5P30044 214 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 TDRD7Q8NHU6 1098 aaKnown RBP28.91■■■□□ 2.22
DHFR-203ENST00000505337 SDR42E1Q8WUS8 393 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 KRT23Q9C075 422 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 ANAPC4Q9UJX5 808 aa28.91■■■□□ 2.22
DHFR-203ENST00000505337 CHAF1AQ13111 956 aaPredicted RBP28.9■■■□□ 2.22
DHFR-203ENST00000505337 RESTQ13127 1097 aa28.9■■■□□ 2.22
DHFR-203ENST00000505337 CSPP1Q1MSJ5 1256 aa28.9■■■□□ 2.22
DHFR-203ENST00000505337 FER1L6Q2WGJ9 1857 aa28.9■■■□□ 2.22
DHFR-203ENST00000505337 OLFM4Q6UX06 510 aa28.9■■■□□ 2.22
DHFR-203ENST00000505337 MRE11P49959 708 aa28.89■■■□□ 2.22
DHFR-203ENST00000505337 DYNLL1P63167 89 aaKnown RBP28.89■■■□□ 2.22
DHFR-203ENST00000505337 IGDCC4Q8TDY8 1250 aa28.89■■■□□ 2.22
DHFR-203ENST00000505337 RNF181Q9P0P0 153 aa28.89■■■□□ 2.22
DHFR-203ENST00000505337 BBOX1O75936 387 aa28.89■■■□□ 2.21
DHFR-203ENST00000505337 PPARAQ07869 468 aa28.89■■■□□ 2.21
DHFR-203ENST00000505337 MFSD6Q6ZSS7 791 aa28.89■■■□□ 2.21
DHFR-203ENST00000505337 ZNF804AQ7Z570 1209 aa28.89■■■□□ 2.21
DHFR-203ENST00000505337 SGMS1Q86VZ5 419 aa28.89■■■□□ 2.21
DHFR-203ENST00000505337 INCENPQ9NQS7 918 aa28.89■■■□□ 2.21
DHFR-203ENST00000505337 DHX16O60231 1041 aaKnown RBP28.88■■■□□ 2.21
DHFR-203ENST00000505337 UBE2HP62256 183 aa28.88■■■□□ 2.21
DHFR-203ENST00000505337 KRT85P78386 507 aa28.88■■■□□ 2.21
DHFR-203ENST00000505337 GRPEL1Q9HAV7 217 aa28.88■■■□□ 2.21
DHFR-203ENST00000505337 LY9Q9HBG7 655 aa28.88■■■□□ 2.21
DHFR-203ENST00000505337 PODXL2Q9NZ53 605 aa28.88■■■□□ 2.21
DHFR-203ENST00000505337 KDM4AO75164 1064 aa28.87■■■□□ 2.21
DHFR-203ENST00000505337 XRCC6P12956 609 aaKnown RBP eCLIP28.87■■■□□ 2.211e-7■■■□□ 16.3
DHFR-203ENST00000505337 FDPSP14324 419 aaKnown RBP28.87■■■□□ 2.21
DHFR-203ENST00000505337 ATP2B4P23634 1241 aa28.87■■■□□ 2.21
DHFR-203ENST00000505337 SOGA3Q5TF21 947 aa28.87■■■□□ 2.21
DHFR-203ENST00000505337 GIMAP6Q6P9H5 292 aa28.87■■■□□ 2.21
DHFR-203ENST00000505337 APOA5Q6Q788 366 aa28.87■■■□□ 2.21
DHFR-203ENST00000505337 RNF41Q9H4P4 317 aaPredicted RBP28.87■■■□□ 2.21
DHFR-203ENST00000505337 ZSWIM5Q9P217 1185 aa28.87■■■□□ 2.21
DHFR-203ENST00000505337 NID2Q14112 1375 aa28.87■■■□□ 2.21
DHFR-203ENST00000505337 MYH6P13533 1939 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 H3BQV1 296 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 LMNB1P20700 586 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 LIFRP42702 1097 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 IFFO2Q5TF58 517 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 SPTY2D1Q68D10 685 aaPredicted RBP28.86■■■□□ 2.21
DHFR-203ENST00000505337 WDR66Q8TBY9 1149 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 MTA3Q9BTC8 594 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 ELP1O95163 1332 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 DDX60LQ5H9U9 1706 aaKnown RBP28.86■■■□□ 2.21
DHFR-203ENST00000505337 UFL1O94874 794 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 TMC4Q7Z404 712 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 FOCADQ5VW36 1801 aa28.86■■■□□ 2.21
DHFR-203ENST00000505337 FAM173BQ6P4H8 233 aa28.85■■■□□ 2.21
DHFR-203ENST00000505337 GPR101Q96P66 508 aaPredicted RBP28.85■■■□□ 2.21
DHFR-203ENST00000505337 ZSCAN16Q9H4T2 348 aaPredicted RBP28.85■■■□□ 2.21
DHFR-203ENST00000505337 SENP2Q9HC62 589 aa28.85■■■□□ 2.21
DHFR-203ENST00000505337 GGA1Q9UJY5 639 aa28.85■■■□□ 2.21
DHFR-203ENST00000505337 LTBP3Q9NS15 1303 aa28.85■■■□□ 2.21
DHFR-203ENST00000505337 CCDC93Q567U6 631 aa28.84■■■□□ 2.21
DHFR-203ENST00000505337 TMEM67Q5HYA8 995 aa28.84■■■□□ 2.21
DHFR-203ENST00000505337 TAOK3Q9H2K8 898 aa28.84■■■□□ 2.21
DHFR-203ENST00000505337 SNED1Q8TER0 1413 aa28.83■■■□□ 2.21
DHFR-203ENST00000505337 ZNF526Q8TF50 670 aaPredicted RBP28.83■■■□□ 2.21
DHFR-203ENST00000505337 JAG2Q9Y219 1238 aa28.83■■■□□ 2.21
DHFR-203ENST00000505337 TTC6Q86TZ1 520 aa28.83■■■□□ 2.21
DHFR-203ENST00000505337 RAB11FIP4Q86YS3 637 aa28.83■■■□□ 2.21
DHFR-203ENST00000505337 SYAP1Q96A49 352 aaPredicted RBP28.83■■■□□ 2.21
DHFR-203ENST00000505337 DZIP1Q86YF9 867 aaKnown RBP28.82■■■□□ 2.2
DHFR-203ENST00000505337 AATFQ9NY61 560 aaKnown RBP eCLIP28.82■■■□□ 2.2
DHFR-203ENST00000505337 IL1R1P14778 569 aa28.81■■■□□ 2.2
DHFR-203ENST00000505337 METAP2P50579 478 aaKnown RBP eCLIP28.81■■■□□ 2.2
DHFR-203ENST00000505337 CRNKL1Q9BZJ0 848 aaKnown RBP28.81■■■□□ 2.2
DHFR-203ENST00000505337 PPEF1O14829 653 aaPredicted RBP28.8■■■□□ 2.2
DHFR-203ENST00000505337 IFIT3O14879 490 aaKnown RBP28.8■■■□□ 2.2
DHFR-203ENST00000505337 SCAND2PQ9GZW5 306 aaPredicted RBP28.8■■■□□ 2.2
DHFR-203ENST00000505337 GPBP1L1Q9HC44 474 aaPredicted RBP28.8■■■□□ 2.2
DHFR-203ENST00000505337 CD209Q9NNX6 404 aa28.8■■■□□ 2.2
DHFR-203ENST00000505337 MINDY4BA8MYZ0 360 aa28.8■■■□□ 2.2
DHFR-203ENST00000505337 CPLX1O14810 134 aa28.8■■■□□ 2.2
DHFR-203ENST00000505337 LDHBP07195 334 aaKnown RBP28.8■■■□□ 2.2
DHFR-203ENST00000505337 FGRP09769 529 aa28.8■■■□□ 2.2
DHFR-203ENST00000505337 PCP11498 1178 aaKnown RBP28.8■■■□□ 2.2
DHFR-203ENST00000505337 RRP12Q5JTH9 1297 aaKnown RBP28.8■■■□□ 2.2
DHFR-203ENST00000505337 TBC1D16Q8TBP0 767 aa28.8■■■□□ 2.2
DHFR-203ENST00000505337 ZBTB43O43298 467 aa28.79■■■□□ 2.2
DHFR-203ENST00000505337 PPFIA3O75145 1194 aa28.79■■■□□ 2.2
DHFR-203ENST00000505337 CTR9Q6PD62 1173 aa28.79■■■□□ 2.2
DHFR-203ENST00000505337 RTKN2Q8IZC4 609 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms