RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 LIN37Q96GY3 246 aaPredicted RBP6.38□□□□□ -1.39
PHC3-216ENST00000497171 LMCD1Q9NZU5 365 aa6.38□□□□□ -1.39
PHC3-216ENST00000497171 LEFTY1O75610 366 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 GLI1P08151 1106 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 HCLS1P14317 486 aaPredicted RBP6.37□□□□□ -1.39
PHC3-216ENST00000497171 NPR3P17342 541 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 ITPKAP23677 461 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 TTLL4Q14679 1199 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 KIAA0319Q5VV43 1072 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 LCNL1Q6ZST4 164 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 CILP2Q8IUL8 1156 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 TOP6BLQ8N6T0 577 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 CCDC86Q9H6F5 360 aaKnown RBP6.37□□□□□ -1.39
PHC3-216ENST00000497171 PRDM7Q9NQW5 492 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 KRT82Q9NSB4 513 aa6.37□□□□□ -1.39
PHC3-216ENST00000497171 FZD6O60353 706 aa6.36□□□□□ -1.39
PHC3-216ENST00000497171 TMEM67Q5HYA8 995 aa6.36□□□□□ -1.39
PHC3-216ENST00000497171 RPS26P11Q5JNZ5 115 aaPredicted RBP6.36□□□□□ -1.39
PHC3-216ENST00000497171 C1QL4Q86Z23 238 aa6.36□□□□□ -1.39
PHC3-216ENST00000497171 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.36□□□□□ -1.39
PHC3-216ENST00000497171 FBXO15Q8NCQ5 510 aaPredicted RBP6.36□□□□□ -1.39
PHC3-216ENST00000497171 KIRREL1Q96J84 757 aa6.36□□□□□ -1.39
PHC3-216ENST00000497171 ZC3H12CQ9C0D7 883 aaKnown RBP6.36□□□□□ -1.39
PHC3-216ENST00000497171 TNKS2Q9H2K2 1166 aa6.36□□□□□ -1.39
PHC3-216ENST00000497171 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
PHC3-216ENST00000497171 CTNND2Q9UQB3 1225 aa6.36□□□□□ -1.39
PHC3-216ENST00000497171 GNAT3A8MTJ3 354 aa6.35□□□□□ -1.39
PHC3-216ENST00000497171 KIF4BQ2VIQ3 1234 aa6.35□□□□□ -1.39
PHC3-216ENST00000497171 CYFIP1Q7L576 1253 aa6.35□□□□□ -1.39
PHC3-216ENST00000497171 DISC1Q9NRI5 854 aa6.35□□□□□ -1.39
PHC3-216ENST00000497171 U3KQE9 123 aa6.35□□□□□ -1.39
PHC3-216ENST00000497171 TMEM253P0C7T8 217 aa6.34□□□□□ -1.39
PHC3-216ENST00000497171 PPP2R3AQ06190 1150 aa6.34□□□□□ -1.39
PHC3-216ENST00000497171 TTLL10Q6ZVT0 673 aa6.34□□□□□ -1.39
PHC3-216ENST00000497171 CCDC97Q96F63 343 aaPredicted RBP6.34□□□□□ -1.39
PHC3-216ENST00000497171 GSTP1P09211 210 aaKnown RBP6.33□□□□□ -1.4
PHC3-216ENST00000497171 CLCN7P51798 805 aa6.33□□□□□ -1.4
PHC3-216ENST00000497171 FKBP4Q02790 459 aaKnown RBP eCLIP6.33□□□□□ -1.4
PHC3-216ENST00000497171 ECM1Q16610 540 aa6.33□□□□□ -1.4
PHC3-216ENST00000497171 CIAPIN1Q6FI81 312 aa6.33□□□□□ -1.4
PHC3-216ENST00000497171 PRR23BQ6ZRT6 265 aa6.33□□□□□ -1.4
PHC3-216ENST00000497171 WDR89Q96FK6 387 aaPredicted RBP6.33□□□□□ -1.4
PHC3-216ENST00000497171 CCDC120Q96HB5 630 aa6.33□□□□□ -1.4
PHC3-216ENST00000497171 CCDC87Q9NVE4 849 aa6.33□□□□□ -1.4
PHC3-216ENST00000497171 TRAK1Q9UPV9 953 aa6.33□□□□□ -1.4
PHC3-216ENST00000497171 IGF2BP3O00425 579 aaKnown RBP eCLIP6.32□□□□□ -1.4
PHC3-216ENST00000497171 ABL1P00519 1130 aa6.32□□□□□ -1.4
PHC3-216ENST00000497171 C1QTNF9P0C862 333 aa6.32□□□□□ -1.4
PHC3-216ENST00000497171 KCNB2Q92953 911 aa6.32□□□□□ -1.4
PHC3-216ENST00000497171 ISL2Q96A47 359 aa6.32□□□□□ -1.4
PHC3-216ENST00000497171 ARID3CA6NKF2 412 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.31□□□□□ -1.4
PHC3-216ENST00000497171 NPIPB6E9PJ23 425 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 ZNF862O60290 1169 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 CPNE3O75131 537 aaKnown RBP6.31□□□□□ -1.4
PHC3-216ENST00000497171 BUD31P41223 144 aaPredicted RBP6.31□□□□□ -1.4
PHC3-216ENST00000497171 CTSWP56202 376 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 SPACA3Q8IXA5 215 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 RNF214Q8ND24 703 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 DIRC2Q96SL1 478 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 ARID3AQ99856 593 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 NSUN3Q9H649 340 aaKnown RBP6.31□□□□□ -1.4
PHC3-216ENST00000497171 PICK1Q9NRD5 415 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 BRPF3Q9ULD4 1205 aa6.31□□□□□ -1.4
PHC3-216ENST00000497171 TCAF2A6NFQ2 919 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 GADD45BO75293 160 aaPredicted RBP6.3□□□□□ -1.4
PHC3-216ENST00000497171 INHBBP09529 407 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 SSFA2P28290 1259 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 ZNF157P51786 506 aaPredicted RBP6.3□□□□□ -1.4
PHC3-216ENST00000497171 PDE3BQ13370 1112 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 FYB2Q5VWT5 728 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 PRPF40BQ6NWY9 871 aaKnown RBP6.3□□□□□ -1.4
PHC3-216ENST00000497171 AMIGO3Q86WK7 504 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 NPHS2Q9NP85 383 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 PRDM10Q9NQV6 1147 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 GPN3Q9UHW5 284 aaPredicted RBP6.3□□□□□ -1.4
PHC3-216ENST00000497171 PCDHGC5Q9Y5F6 944 aa6.3□□□□□ -1.4
PHC3-216ENST00000497171 PITPNM2Q9BZ72 1349 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 TMEM238LA0A1B0GVL6 79 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 ERVK-24P63145 666 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 KCNA10Q16322 511 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 USPL1Q5W0Q7 1092 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 ACSBG1Q96GR2 724 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 HEXIM2Q96MH2 286 aaKnown RBP6.29□□□□□ -1.4
PHC3-216ENST00000497171 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 EPB41L4BQ9H329 900 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 ABCB6Q9NP58 842 aa6.29□□□□□ -1.4
PHC3-216ENST00000497171 DCP1AQ9NPI6 582 aaPredicted RBP6.29□□□□□ -1.4
PHC3-216ENST00000497171 NEFMP07197 916 aa6.28□□□□□ -1.4
PHC3-216ENST00000497171 RAC2P15153 192 aa6.28□□□□□ -1.4
PHC3-216ENST00000497171 GDNFP39905 211 aa6.28□□□□□ -1.4
PHC3-216ENST00000497171 DTHD1Q6ZMT9 781 aa6.28□□□□□ -1.4
PHC3-216ENST00000497171 CARS2Q9HA77 564 aaKnown RBP6.28□□□□□ -1.4
PHC3-216ENST00000497171 PRDM5Q9NQX1 630 aaPredicted RBP6.28□□□□□ -1.4
PHC3-216ENST00000497171 TMEM39AQ9NV64 488 aa6.28□□□□□ -1.4
PHC3-216ENST00000497171 PPP4R2Q9NY27 417 aa6.28□□□□□ -1.4
PHC3-216ENST00000497171 SERPINA10Q9UK55 444 aa6.28□□□□□ -1.4
PHC3-216ENST00000497171 FAM155AB1AL88 458 aaPredicted RBP6.27□□□□□ -1.41
PHC3-216ENST00000497171 NDUFB5O43674 189 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms