RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 WNT10BO00744 389 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 RABEP1Q15276 862 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 C12orf60Q5U649 245 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 CTR9Q6PD62 1173 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 TEX11Q8IYF3 940 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 RASEFQ8IZ41 740 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 SDR42E1Q8WUS8 393 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 MTA3Q9BTC8 594 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 NBPF3Q9H094 633 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 NAPBQ9H115 298 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 DHX36Q9H2U1 1008 aaKnown RBP11□□□□□ -0.65
ABCA1-204ENST00000494467 USP40Q9NVE5 1235 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 CNOT7Q9UIV1 285 aaKnown RBP11□□□□□ -0.65
ABCA1-204ENST00000494467 PALD1Q9ULE6 856 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 FLT1P17948 1338 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 PITPNM2Q9BZ72 1349 aa11□□□□□ -0.65
ABCA1-204ENST00000494467 F8W031 263 aaPredicted RBP10.99□□□□□ -0.65
ABCA1-204ENST00000494467 H7C1D1 291 aa10.99□□□□□ -0.65
ABCA1-204ENST00000494467 ZNF213O14771 459 aa10.99□□□□□ -0.65
ABCA1-204ENST00000494467 HMGB1P09429 215 aaKnown RBP10.99□□□□□ -0.65
ABCA1-204ENST00000494467 MICALL2Q8IY33 904 aa10.99□□□□□ -0.65
ABCA1-204ENST00000494467 STAG1Q8WVM7 1258 aa10.99□□□□□ -0.65
ABCA1-204ENST00000494467 OSBPL5Q9H0X9 879 aaPredicted RBP10.99□□□□□ -0.65
ABCA1-204ENST00000494467 EHD4Q9H223 541 aa10.99□□□□□ -0.65
ABCA1-204ENST00000494467 ZSWIM6Q9HCJ5 1215 aa10.99□□□□□ -0.65
ABCA1-204ENST00000494467 ZNF70Q9UC06 446 aaPredicted RBP10.99□□□□□ -0.65
ABCA1-204ENST00000494467 FAM198AQ9UFP1 575 aa10.99□□□□□ -0.65
ABCA1-204ENST00000494467 PGAP2Q9UHJ9 254 aa10.99□□□□□ -0.65
ABCA1-204ENST00000494467 USP17L12C9JPN9 530 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 USP17L21D6R901 530 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 MYO1BO43795 1136 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 ORC4O43929 436 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 APPP05067 770 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 PSMA5P28066 241 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 USP5P45974 858 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 MAP3K10Q02779 954 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 GABPAQ06546 454 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 PPARAQ07869 468 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 ZC3H15Q8WU90 426 aaKnown RBP10.98□□□□□ -0.65
ABCA1-204ENST00000494467 TGFBRAP1Q8WUH2 860 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 FAM151AQ8WW52 585 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 SNX21Q969T3 373 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 AGXT2Q9BYV1 514 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 RNF41Q9H4P4 317 aaPredicted RBP10.98□□□□□ -0.65
ABCA1-204ENST00000494467 CNNM2Q9H8M5 875 aa10.98□□□□□ -0.65
ABCA1-204ENST00000494467 DDX4Q9NQI0 724 aaKnown RBP10.98□□□□□ -0.65
ABCA1-204ENST00000494467 ADARB2Q9NS39 739 aaKnown RBP10.98□□□□□ -0.65
ABCA1-204ENST00000494467 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
ABCA1-204ENST00000494467 E7EWF7 191 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 DDNO94850 711 aaPredicted RBP10.97□□□□□ -0.65
ABCA1-204ENST00000494467 TDO2P48775 406 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 EXOSC10Q01780 885 aaKnown RBP10.97□□□□□ -0.65
ABCA1-204ENST00000494467 AKNAD1Q5T1N1 836 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 STOX1Q6ZVD7 989 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 USP50Q70EL3 339 aaPredicted RBP10.97□□□□□ -0.65
ABCA1-204ENST00000494467 TTC6Q86TZ1 520 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 TTC14Q96N46 770 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 TDRD3Q9H7E2 651 aaKnown RBP10.97□□□□□ -0.65
ABCA1-204ENST00000494467 RBM19Q9Y4C8 960 aaKnown RBP10.97□□□□□ -0.65
ABCA1-204ENST00000494467 PCDHAC2Q9Y5I4 1007 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 PPP2R3BQ9Y5P8 575 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 GJA3Q9Y6H8 435 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 TAF6LQ9Y6J9 622 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 CNTNAP1P78357 1384 aa10.97□□□□□ -0.65
ABCA1-204ENST00000494467 IQCA1LA6NCM1 817 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 DCAF8L1A6NGE4 600 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 TBC1D12O60347 775 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 SLC3A2P08195 630 aaKnown RBP10.96□□□□□ -0.65
ABCA1-204ENST00000494467 EVCP57679 992 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 NFIAQ12857 509 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 TNFAIP1Q13829 316 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 KIF4BQ2VIQ3 1234 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 ADCK5Q3MIX3 580 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 IFFO2Q5TF58 517 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 C16orf86Q6ZW13 317 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 RUFY3Q7L099 469 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 TBC1D10CQ8IV04 446 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 FOXP4Q8IVH2 680 aaPredicted RBP10.96□□□□□ -0.65
ABCA1-204ENST00000494467 AMOTL1Q8IY63 956 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 MB21D2Q8IYB1 491 aaPredicted RBP10.96□□□□□ -0.65
ABCA1-204ENST00000494467 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 KRT23Q9C075 422 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 ZNF287Q9HBT7 754 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 MCM9Q9NXL9 1143 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 TMOD2Q9NZR1 351 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 PI4KBQ9UBF8 816 aa10.96□□□□□ -0.65
ABCA1-204ENST00000494467 PAPPA2Q9BXP8 1791 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 PLIN4Q96Q06 1357 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 SHTN1A0MZ66 631 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 POTECB2RU33 542 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 EGFRP00533 1210 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 LMOD1P29536 600 aaPredicted RBP10.95□□□□□ -0.66
ABCA1-204ENST00000494467 EPS15P42566 896 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 NOVP48745 357 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 TNNI2P48788 182 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 MCM2P49736 904 aa10.95□□□□□ -0.66
ABCA1-204ENST00000494467 RBM5P52756 815 aaKnown RBP eCLIP10.95□□□□□ -0.66
ABCA1-204ENST00000494467 HIRAP54198 1017 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms