RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 ANKRD13CQ8N6S4 541 aa17.49■□□□□ 0.39
ATG4B-222ENST00000491867 C11orf49Q9H6J7 331 aa17.49■□□□□ 0.39
ATG4B-222ENST00000491867 PICK1Q9NRD5 415 aa17.49■□□□□ 0.39
ATG4B-222ENST00000491867 SLC45A1Q9Y2W3 748 aa17.49■□□□□ 0.39
ATG4B-222ENST00000491867 HMGCRP04035 888 aa17.48■□□□□ 0.39
ATG4B-222ENST00000491867 PTPRAP18433 802 aa17.48■□□□□ 0.39
ATG4B-222ENST00000491867 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 POTEB2H3BUK9 544 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 TRIM32Q13049 653 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 SCYL3Q8IZE3 742 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 FAM161BQ96MY7 647 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-222ENST00000491867 PRDM6Q9NQX0 595 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 FAM198AQ9UFP1 575 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 AFG3L2Q9Y4W6 797 aa17.47■□□□□ 0.39
ATG4B-222ENST00000491867 NCOR1O75376 2440 aa17.46■□□□□ 0.39
ATG4B-222ENST00000491867 METTL24Q5JXM2 366 aa17.46■□□□□ 0.39
ATG4B-222ENST00000491867 FAM109BQ6ICB4 259 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-222ENST00000491867 ZFPM1Q8IX07 1006 aa17.46■□□□□ 0.39
ATG4B-222ENST00000491867 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-222ENST00000491867 MDM2Q00987 491 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-222ENST00000491867 DIXDC1Q155Q3 683 aa17.45■□□□□ 0.38
ATG4B-222ENST00000491867 LRRC24Q50LG9 513 aa17.45■□□□□ 0.38
ATG4B-222ENST00000491867 OGDHLQ9ULD0 1010 aa17.45■□□□□ 0.38
ATG4B-222ENST00000491867 PFASO15067 1338 aa17.45■□□□□ 0.38
ATG4B-222ENST00000491867 DDX60LQ5H9U9 1706 aaKnown RBP17.44■□□□□ 0.38
ATG4B-222ENST00000491867 TRIM75PA6NK02 468 aa17.44■□□□□ 0.38
ATG4B-222ENST00000491867 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
ATG4B-222ENST00000491867 USP40Q9NVE5 1235 aa17.44■□□□□ 0.38
ATG4B-222ENST00000491867 AGTPBP1Q9UPW5 1226 aa17.44■□□□□ 0.38
ATG4B-222ENST00000491867 MUC3AQ02505 3323 aa17.44■□□□□ 0.38
ATG4B-222ENST00000491867 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
ATG4B-222ENST00000491867 ATRNL1Q5VV63 1379 aa17.43■□□□□ 0.38
ATG4B-222ENST00000491867 PDE8BO95263 885 aa17.43■□□□□ 0.38
ATG4B-222ENST00000491867 VGLL2Q8N8G2 317 aa17.43■□□□□ 0.38
ATG4B-222ENST00000491867 KAZALD1Q96I82 304 aa17.43■□□□□ 0.38
ATG4B-222ENST00000491867 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
ATG4B-222ENST00000491867 GJD2Q9UKL4 321 aa17.43■□□□□ 0.38
ATG4B-222ENST00000491867 TREML2Q5T2D2 321 aa17.42■□□□□ 0.38
ATG4B-222ENST00000491867 WDR66Q8TBY9 1149 aa17.42■□□□□ 0.38
ATG4B-222ENST00000491867 LRRFIP2Q9Y608 721 aaKnown RBP17.42■□□□□ 0.38
ATG4B-222ENST00000491867 PTPRFP10586 1907 aa17.42■□□□□ 0.38
ATG4B-222ENST00000491867 VAMP4O75379 141 aa17.41■□□□□ 0.38
ATG4B-222ENST00000491867 CCDC84Q86UT8 332 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-222ENST00000491867 WWC1Q8IX03 1113 aa17.41■□□□□ 0.38
ATG4B-222ENST00000491867 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-222ENST00000491867 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-222ENST00000491867 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
ATG4B-222ENST00000491867 CDH23Q9H251 3354 aa17.41■□□□□ 0.38
ATG4B-222ENST00000491867 ALDH1L1O75891 902 aa17.4■□□□□ 0.38
ATG4B-222ENST00000491867 IFIT1P09914 478 aaKnown RBP17.4■□□□□ 0.38
ATG4B-222ENST00000491867 SLURP2P0DP57 97 aa17.4■□□□□ 0.38
ATG4B-222ENST00000491867 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-222ENST00000491867 RGS3P49796 1198 aa17.4■□□□□ 0.38
ATG4B-222ENST00000491867 LRRC26Q2I0M4 334 aa17.4■□□□□ 0.38
ATG4B-222ENST00000491867 ZSCAN29Q8IWY8 852 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-222ENST00000491867 TRIB2Q92519 343 aa17.4■□□□□ 0.38
ATG4B-222ENST00000491867 BDP1A6H8Y1 2624 aa17.39■□□□□ 0.37
ATG4B-222ENST00000491867 CTNND1O60716 968 aaKnown RBP17.39■□□□□ 0.37
ATG4B-222ENST00000491867 COL6A1P12109 1028 aa17.39■□□□□ 0.37
ATG4B-222ENST00000491867 PRKAR2AP13861 404 aaKnown RBP17.39■□□□□ 0.37
ATG4B-222ENST00000491867 PRDX5P30044 214 aa17.39■□□□□ 0.37
ATG4B-222ENST00000491867 GCLCP48506 637 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-222ENST00000491867 PUM3Q15397 648 aaKnown RBP17.39■□□□□ 0.37
ATG4B-222ENST00000491867 MAP3K21Q5TCX8 1036 aa17.39■□□□□ 0.37
ATG4B-222ENST00000491867 ZNF697Q5TEC3 545 aa17.39■□□□□ 0.37
ATG4B-222ENST00000491867 SLC4A10Q6U841 1118 aa17.39■□□□□ 0.37
ATG4B-222ENST00000491867 SH3BP5LQ7L8J4 393 aa17.39■□□□□ 0.37
ATG4B-222ENST00000491867 MAFAQ8NHW3 353 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-222ENST00000491867 BICC1Q9H694 974 aaKnown RBP17.39■□□□□ 0.37
ATG4B-222ENST00000491867 KIF16BQ96L93 1317 aa17.39■□□□□ 0.37
ATG4B-222ENST00000491867 COL2A1P02458 1487 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-222ENST00000491867 NBPF7P0C2Y1 421 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-222ENST00000491867 FGFR2P21802 821 aa17.38■□□□□ 0.37
ATG4B-222ENST00000491867 MAP3K10Q02779 954 aa17.38■□□□□ 0.37
ATG4B-222ENST00000491867 CCDC27Q2M243 656 aa17.38■□□□□ 0.37
ATG4B-222ENST00000491867 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
ATG4B-222ENST00000491867 CDX2Q99626 313 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-222ENST00000491867 SRCIN1Q9C0H9 1055 aa17.38■□□□□ 0.37
ATG4B-222ENST00000491867 IL16Q14005 1332 aa17.38■□□□□ 0.37
ATG4B-222ENST00000491867 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
ATG4B-222ENST00000491867 ENTPD3O75355 529 aa17.37■□□□□ 0.37
ATG4B-222ENST00000491867 LDHBP07195 334 aaKnown RBP17.37■□□□□ 0.37
ATG4B-222ENST00000491867 CYP2B6P20813 491 aa17.37■□□□□ 0.37
ATG4B-222ENST00000491867 LBHD1Q9BQE6 289 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-222ENST00000491867 PHIPQ8WWQ0 1821 aa17.36■□□□□ 0.37
ATG4B-222ENST00000491867 DDTLA6NHG4 134 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-222ENST00000491867 RABL6Q3YEC7 729 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-222ENST00000491867 ANKRD44Q8N8A2 993 aa17.36■□□□□ 0.37
ATG4B-222ENST00000491867 PROCA1Q8NCQ7 364 aaPredicted RBP17.36■□□□□ 0.37
ATG4B-222ENST00000491867 IDI2Q9BXS1 227 aa17.36■□□□□ 0.37
ATG4B-222ENST00000491867 DOCK2Q92608 1830 aa17.35■□□□□ 0.37
ATG4B-222ENST00000491867 SLC5A1P13866 664 aa17.35■□□□□ 0.37
ATG4B-222ENST00000491867 EXOSC9Q06265 439 aaKnown RBP17.35■□□□□ 0.37
ATG4B-222ENST00000491867 SPP2Q13103 211 aa17.35■□□□□ 0.37
ATG4B-222ENST00000491867 ASCC2Q9H1I8 757 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-222ENST00000491867 DOCK1Q14185 1865 aa17.35■□□□□ 0.37
ATG4B-222ENST00000491867 COL9A1P20849 921 aa17.34■□□□□ 0.37
ATG4B-222ENST00000491867 HMGCS2P54868 508 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms