RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 RNF180Q86T96 592 aa12.01□□□□□ -0.49
TTC3-218ENST00000484047 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
TTC3-218ENST00000484047 PCDHB10Q9UN67 800 aa12.01□□□□□ -0.49
TTC3-218ENST00000484047 LTBP3Q9NS15 1303 aa12.01□□□□□ -0.49
TTC3-218ENST00000484047 ALDH1L1O75891 902 aa12□□□□□ -0.49
TTC3-218ENST00000484047 SLC10A6Q3KNW5 377 aa12□□□□□ -0.49
TTC3-218ENST00000484047 FOXB2Q5VYV0 432 aa12□□□□□ -0.49
TTC3-218ENST00000484047 VN1R5Q7Z5H4 357 aa12□□□□□ -0.49
TTC3-218ENST00000484047 MARK1Q9P0L2 795 aa12□□□□□ -0.49
TTC3-218ENST00000484047 LAMC2Q13753 1193 aa11.99□□□□□ -0.49
TTC3-218ENST00000484047 DIEXFQ68CQ4 756 aaKnown RBP11.99□□□□□ -0.49
TTC3-218ENST00000484047 VHLLQ6RSH7 139 aa11.99□□□□□ -0.49
TTC3-218ENST00000484047 TMEM40Q8WWA1 233 aa11.99□□□□□ -0.49
TTC3-218ENST00000484047 CCDC136Q96JN2 1154 aa11.99□□□□□ -0.49
TTC3-218ENST00000484047 EFCC1Q9HA90 598 aa11.99□□□□□ -0.49
TTC3-218ENST00000484047 GPLD1P80108 840 aa11.99□□□□□ -0.49
TTC3-218ENST00000484047 PDZD3Q86UT5 571 aa11.99□□□□□ -0.49
TTC3-218ENST00000484047 WDR75Q8IWA0 830 aaKnown RBP11.99□□□□□ -0.49
TTC3-218ENST00000484047 GEMIN8Q9NWZ8 242 aaKnown RBP11.99□□□□□ -0.49
TTC3-218ENST00000484047 BNIP3LO60238 219 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 HTR3BO95264 441 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 LONRF2Q1L5Z9 754 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 CT47A1Q5JQC4 288 aaPredicted RBP11.98□□□□□ -0.49
TTC3-218ENST00000484047 CORINQ9Y5Q5 1042 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 L1CAMP32004 1257 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 RHBDL3P58872 404 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 LBRQ14739 615 aaKnown RBP11.98□□□□□ -0.49
TTC3-218ENST00000484047 TTF1Q15361 905 aaPredicted RBP11.98□□□□□ -0.49
TTC3-218ENST00000484047 NFE2Q16621 373 aaPredicted RBP11.98□□□□□ -0.49
TTC3-218ENST00000484047 UNC5AQ6ZN44 842 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 TRIM67Q6ZTA4 783 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 SMC5Q8IY18 1101 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 SLC26A8Q96RN1 970 aa11.98□□□□□ -0.49
TTC3-218ENST00000484047 UNC13AQ9UPW8 1703 aa11.97□□□□□ -0.49
TTC3-218ENST00000484047 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
TTC3-218ENST00000484047 WASHC2CQ9Y4E1 1318 aa11.97□□□□□ -0.49
TTC3-218ENST00000484047 SUSD5O60279 629 aa11.97□□□□□ -0.49
TTC3-218ENST00000484047 CD33P20138 364 aa11.97□□□□□ -0.49
TTC3-218ENST00000484047 LRRFIP1Q32MZ4 808 aaKnown RBP11.97□□□□□ -0.49
TTC3-218ENST00000484047 CEP135Q66GS9 1140 aa11.97□□□□□ -0.49
TTC3-218ENST00000484047 MAP1SQ66K74 1059 aaPredicted RBP11.97□□□□□ -0.49
TTC3-218ENST00000484047 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
TTC3-218ENST00000484047 RAPGEF3O95398 923 aa11.96□□□□□ -0.49
TTC3-218ENST00000484047 BMP1P13497 986 aa11.96□□□□□ -0.49
TTC3-218ENST00000484047 NDFIP2Q9NV92 336 aa11.96□□□□□ -0.49
TTC3-218ENST00000484047 SOX13Q9UN79 622 aa11.96□□□□□ -0.49
TTC3-218ENST00000484047 ALG1L2C9J202 215 aa11.96□□□□□ -0.5
TTC3-218ENST00000484047 SOX5P35711 763 aa11.96□□□□□ -0.5
TTC3-218ENST00000484047 RIPOR1Q6ZS17 1223 aa11.96□□□□□ -0.5
TTC3-218ENST00000484047 TAB3Q8N5C8 712 aaPredicted RBP11.96□□□□□ -0.5
TTC3-218ENST00000484047 EXOC2Q96KP1 924 aa11.96□□□□□ -0.5
TTC3-218ENST00000484047 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.5
TTC3-218ENST00000484047 NCOA5Q9HCD5 579 aaKnown RBP11.96□□□□□ -0.5
TTC3-218ENST00000484047 MCM8Q9UJA3 840 aa11.96□□□□□ -0.5
TTC3-218ENST00000484047 GSG1L2A8MUP6 293 aa11.95□□□□□ -0.5
TTC3-218ENST00000484047 PMLP29590 882 aa11.95□□□□□ -0.5
TTC3-218ENST00000484047 NCAPHQ15003 741 aa11.95□□□□□ -0.5
TTC3-218ENST00000484047 LRRC41Q15345 812 aa11.95□□□□□ -0.5
TTC3-218ENST00000484047 MAP9Q49MG5 647 aa11.95□□□□□ -0.5
TTC3-218ENST00000484047 OVOS1Q6IE37 1185 aa11.95□□□□□ -0.5
TTC3-218ENST00000484047 SPOCK3Q9BQ16 436 aa11.95□□□□□ -0.5
TTC3-218ENST00000484047 FAM86C2PA6NEL3 165 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 GFRA2O00451 464 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 DNAJA2O60884 412 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 RFPL3O75679 317 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 LRRC47Q8N1G4 583 aaKnown RBP11.94□□□□□ -0.5
TTC3-218ENST00000484047 KLHL6Q8WZ60 621 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
TTC3-218ENST00000484047 ABHD17AQ96GS6 310 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 CLUHP3Q96NS8 147 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 IGFLR1Q9H665 355 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 TSPAN6O43657 245 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 GHRHP01286 108 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 KIAA1211LQ6NV74 962 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 AFAP1L2Q8N4X5 818 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 KISS1RQ969F8 398 aaPredicted RBP11.94□□□□□ -0.5
TTC3-218ENST00000484047 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 SLC12A7Q9Y666 1083 aa11.94□□□□□ -0.5
TTC3-218ENST00000484047 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
TTC3-218ENST00000484047 AXDND1Q5T1B0 1012 aaPredicted RBP11.93□□□□□ -0.5
TTC3-218ENST00000484047 SMNDC1O75940 238 aaKnown RBP eCLIP11.92□□□□□ -0.51e-23■■■■■ 42.4
TTC3-218ENST00000484047 GNALP38405 381 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 EPHB1P54762 984 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 SLC9A7Q96T83 725 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 TARS2Q9BW92 718 aaKnown RBP11.92□□□□□ -0.5
TTC3-218ENST00000484047 NUCKS1Q9H1E3 243 aaKnown RBP11.92□□□□□ -0.5
TTC3-218ENST00000484047 CACNA2D2Q9NY47 1150 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 REV1Q9UBZ9 1251 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 NME1P15531 152 aaKnown RBP11.92□□□□□ -0.5
TTC3-218ENST00000484047 EIF2AK2P19525 551 aaKnown RBP11.92□□□□□ -0.5
TTC3-218ENST00000484047 RPS6KC1Q96S38 1066 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 KIF2CQ99661 725 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 PHAXQ9H814 394 aaKnown RBP11.92□□□□□ -0.5
TTC3-218ENST00000484047 PRDM16Q9HAZ2 1276 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 GMIPQ9P107 970 aa11.92□□□□□ -0.5
TTC3-218ENST00000484047 BIRC2Q13490 618 aa11.91□□□□□ -0.5
TTC3-218ENST00000484047 SCARF1Q14162 830 aa11.91□□□□□ -0.5
TTC3-218ENST00000484047 INPP5AQ14642 412 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms