RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CNTNAP3Q9BZ76 1288 aa8.82□□□□□ -1
CHD6-209ENST00000482596 PCDHAC2Q9Y5I4 1007 aa8.82□□□□□ -1
CHD6-209ENST00000482596 FASNP49327 2511 aaKnown RBP8.82□□□□□ -1
CHD6-209ENST00000482596 DNAH14Q0VDD8 3507 aa8.81□□□□□ -1
CHD6-209ENST00000482596 TRANK1O15050 2925 aa8.81□□□□□ -1
CHD6-209ENST00000482596 DMDP11532 3685 aa8.81□□□□□ -1
CHD6-209ENST00000482596 TRIOO75962 3097 aa8.81□□□□□ -1
CHD6-209ENST00000482596 MED19A0JLT2 244 aaPredicted RBP8.81□□□□□ -1
CHD6-209ENST00000482596 BCRP11274 1271 aa8.81□□□□□ -1
CHD6-209ENST00000482596 CETPP11597 493 aa8.81□□□□□ -1
CHD6-209ENST00000482596 LSM11P83369 360 aaKnown RBP eCLIP8.81□□□□□ -1
CHD6-209ENST00000482596 IRF5Q13568 498 aa8.81□□□□□ -1
CHD6-209ENST00000482596 SUPT20HL1Q3ZLR7 823 aa8.81□□□□□ -1
CHD6-209ENST00000482596 DACT2Q5SW24 774 aa8.81□□□□□ -1
CHD6-209ENST00000482596 BADQ92934 168 aa8.81□□□□□ -1
CHD6-209ENST00000482596 TIFAQ96CG3 184 aa8.81□□□□□ -1
CHD6-209ENST00000482596 AK9Q5TCS8 1911 aa8.81□□□□□ -1
CHD6-209ENST00000482596 CEMIPQ8WUJ3 1361 aa8.81□□□□□ -1
CHD6-209ENST00000482596 AOX1Q06278 1338 aa8.8□□□□□ -1
CHD6-209ENST00000482596 CLRN2A0PK11 232 aa8.8□□□□□ -1
CHD6-209ENST00000482596 UFL1O94874 794 aa8.8□□□□□ -1
CHD6-209ENST00000482596 HMOX1P09601 288 aa8.8□□□□□ -1
CHD6-209ENST00000482596 FOSBP53539 338 aa8.8□□□□□ -1
CHD6-209ENST00000482596 AAK1Q2M2I8 961 aa8.8□□□□□ -1
CHD6-209ENST00000482596 MICALL1Q8N3F8 863 aa8.8□□□□□ -1
CHD6-209ENST00000482596 PRSS33Q8NF86 280 aa8.8□□□□□ -1
CHD6-209ENST00000482596 RNPC3Q96LT9 517 aaKnown RBP8.8□□□□□ -1
CHD6-209ENST00000482596 UTP14AQ9BVJ6 771 aaKnown RBP8.8□□□□□ -1
CHD6-209ENST00000482596 ZNF804BA4D1E1 1349 aa8.8□□□□□ -1
CHD6-209ENST00000482596 ACACBO00763 2458 aa8.79□□□□□ -1
CHD6-209ENST00000482596 BTBD11A6QL63 1104 aa8.79□□□□□ -1
CHD6-209ENST00000482596 PDHXO00330 501 aa8.79□□□□□ -1
CHD6-209ENST00000482596 IRF6O14896 467 aa8.79□□□□□ -1
CHD6-209ENST00000482596 SNRPA1P09661 255 aaKnown RBP8.79□□□□□ -1
CHD6-209ENST00000482596 EPHB4P54760 987 aa8.79□□□□□ -1
CHD6-209ENST00000482596 CSPP1Q1MSJ5 1256 aa8.79□□□□□ -1
CHD6-209ENST00000482596 KIAA0825Q8IV33 1275 aa8.79□□□□□ -1
CHD6-209ENST00000482596 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
CHD6-209ENST00000482596 FBXW7Q969H0 707 aa8.79□□□□□ -1
CHD6-209ENST00000482596 ZNF428Q96B54 188 aa8.79□□□□□ -1
CHD6-209ENST00000482596 HMX1Q9NP08 348 aaPredicted RBP8.79□□□□□ -1
CHD6-209ENST00000482596 PPP2R3BQ9Y5P8 575 aa8.79□□□□□ -1
CHD6-209ENST00000482596 FRMPD3Q5JV73 1810 aa8.78□□□□□ -1
CHD6-209ENST00000482596 SPDYE5A6NIY4 337 aa8.78□□□□□ -1
CHD6-209ENST00000482596 ERC2O15083 957 aa8.78□□□□□ -1
CHD6-209ENST00000482596 IL13P35225 146 aa8.78□□□□□ -1
CHD6-209ENST00000482596 RIC3Q7Z5B4 369 aa8.78□□□□□ -1
CHD6-209ENST00000482596 FAM86C1Q9NVL1 165 aa8.78□□□□□ -1
CHD6-209ENST00000482596 PRKAG2Q9UGJ0 569 aa8.78□□□□□ -1
CHD6-209ENST00000482596 MAP1BP46821 2468 aaKnown RBP8.77□□□□□ -1.01
CHD6-209ENST00000482596 RIF1Q5UIP0 2472 aaKnown RBP8.77□□□□□ -1.01
CHD6-209ENST00000482596 ZNF292O60281 2723 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 TNPO2O14787 897 aaKnown RBP8.77□□□□□ -1.01
CHD6-209ENST00000482596 CYP2C8P10632 490 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 ID4P47928 161 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 PSEN2P49810 448 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 SNAPC2Q13487 334 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 SKIV2LQ15477 1246 aaKnown RBP8.77□□□□□ -1.01
CHD6-209ENST00000482596 PARP10Q53GL7 1025 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 GIGYF2Q6Y7W6 1299 aaKnown RBP8.77□□□□□ -1.01
CHD6-209ENST00000482596 KIF6Q6ZMV9 814 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.77□□□□□ -1.01
CHD6-209ENST00000482596 ZDHHC16Q969W1 377 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 PODXL2Q9NZ53 605 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 SNCAIPQ9Y6H5 919 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 WDR87Q6ZQQ6 2873 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 GPR179Q6PRD1 2367 aa8.77□□□□□ -1.01
CHD6-209ENST00000482596 PRRC2BQ5JSZ5 2229 aaKnown RBP8.76□□□□□ -1.01
CHD6-209ENST00000482596 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.76□□□□□ -1.01
CHD6-209ENST00000482596 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.76□□□□□ -1.01
CHD6-209ENST00000482596 GRXCR1A8MXD5 290 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 HMGCRP04035 888 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 RASA3Q14644 834 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 ANKRD23Q86SG2 305 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 KCNK17Q96T54 332 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 SENP6Q9GZR1 1112 aaPredicted RBP8.76□□□□□ -1.01
CHD6-209ENST00000482596 VEZTQ9HBM0 779 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 PRDM5Q9NQX1 630 aaPredicted RBP8.76□□□□□ -1.01
CHD6-209ENST00000482596 GGA1Q9UJY5 639 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 RRP7AQ9Y3A4 280 aaKnown RBP8.76□□□□□ -1.01
CHD6-209ENST00000482596 A0A0G2JMZ2 1700 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 DMXL1Q9Y485 3027 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 PLXNA3P51805 1871 aa8.76□□□□□ -1.01
CHD6-209ENST00000482596 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 GBF1Q92538 1859 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 FAM186AA6NE01 2351 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 MYL6BP14649 208 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 RTP1P59025 263 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 ACAP1Q15027 740 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 HFE2Q6ZVN8 426 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 SH3RF1Q7Z6J0 888 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.75□□□□□ -1.01
CHD6-209ENST00000482596 PBX4Q9BYU1 374 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 ANKIB1Q9P2G1 1089 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 PCDHGA10Q9Y5H3 936 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 CSADQ9Y600 493 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 COL4A6Q14031 1691 aa8.75□□□□□ -1.01
CHD6-209ENST00000482596 RLFQ13129 1914 aa8.74□□□□□ -1.01
CHD6-209ENST00000482596 MOGSQ13724 837 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms