RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 TNFRSF25Q93038 417 aa8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 SPG7Q9UQ90 795 aa8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 MEGF6O75095 1541 aa8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 COL8A1P27658 744 aa8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 PLA2G4EQ3MJ16 856 aa8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 PLEKHO1Q53GL0 409 aaPredicted RBP8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 SULT6B1Q6IMI4 303 aa8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 DMGDHQ9UI17 866 aaKnown RBP8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 ZMIZ1Q9ULJ6 1067 aa8.86□□□□□ -0.99
CTNNB1-213ENST00000482042 PCDH11XQ9BZA7 1347 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 PCDH11YQ9BZA8 1340 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 TOGARAM1Q9Y4F4 1720 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 CCER2I3L3R5 266 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 ITGB2P05107 769 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 U2AF1L5P0DN76 240 aaPredicted RBP8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 U2AF1Q01081 240 aaKnown RBP eCLIP8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 GPAT2Q6NUI2 795 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 KRT27Q7Z3Y8 459 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 ZCRB1Q8TBF4 217 aaKnown RBP8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 MYO19Q96H55 970 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 BCS1LQ9Y276 419 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 GTF3C3Q9Y5Q9 886 aa8.85□□□□□ -0.99
CTNNB1-213ENST00000482042 BCL9O00512 1426 aa8.84□□□□□ -0.99
CTNNB1-213ENST00000482042 LY75O60449 1722 aa8.84□□□□□ -0.99
CTNNB1-213ENST00000482042 HSP90AB1P08238 724 aaKnown RBP8.84□□□□□ -0.99
CTNNB1-213ENST00000482042 USHBP1Q8N6Y0 703 aa8.84□□□□□ -0.99
CTNNB1-213ENST00000482042 SUV39H2Q9H5I1 410 aa8.84□□□□□ -0.99
CTNNB1-213ENST00000482042 MRS2Q9HD23 443 aa8.84□□□□□ -0.99
CTNNB1-213ENST00000482042 MAPK8IP3Q9UPT6 1336 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 ZNF831Q5JPB2 1677 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.83□□□□□ -1
CTNNB1-213ENST00000482042 ATG7O95352 703 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 HMOX1P09601 288 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 ALAS2P22557 587 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 C1orf141Q5JVX7 400 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 FAM196AQ6ZSG2 479 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 IFNL2Q8IZJ0 200 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 EFCC1Q9HA90 598 aa8.83□□□□□ -1
CTNNB1-213ENST00000482042 NOP53Q9NZM5 478 aaKnown RBP8.83□□□□□ -1
CTNNB1-213ENST00000482042 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
CTNNB1-213ENST00000482042 RAB44Q7Z6P3 723 aaPredicted RBP8.82□□□□□ -1
CTNNB1-213ENST00000482042 VTI1AQ96AJ9 217 aa8.82□□□□□ -1
CTNNB1-213ENST00000482042 CACNA1FO60840 1977 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 PAPPAQ13219 1627 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 KRBA1A5PL33 1030 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 HMGB2P26583 209 aaKnown RBP8.81□□□□□ -1
CTNNB1-213ENST00000482042 PRKAR2BP31323 418 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 STK32AQ8WU08 396 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 KLK14Q9P0G3 267 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 RREB1Q92766 1687 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 KDM3BQ7LBC6 1761 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 UBR2Q8IWV8 1755 aa8.81□□□□□ -1
CTNNB1-213ENST00000482042 ADH7P40394 386 aa8.8□□□□□ -1
CTNNB1-213ENST00000482042 FKBP5Q13451 457 aaPredicted RBP8.8□□□□□ -1
CTNNB1-213ENST00000482042 DGKZQ13574 1117 aa8.8□□□□□ -1
CTNNB1-213ENST00000482042 OCLNQ16625 522 aa8.8□□□□□ -1
CTNNB1-213ENST00000482042 RUNDC1Q96C34 613 aa8.8□□□□□ -1
CTNNB1-213ENST00000482042 CCDC97Q96F63 343 aaPredicted RBP8.8□□□□□ -1
CTNNB1-213ENST00000482042 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.8□□□□□ -1
CTNNB1-213ENST00000482042 SERPINA10Q9UK55 444 aa8.8□□□□□ -1
CTNNB1-213ENST00000482042 CICQ96RK0 1608 aaPredicted RBP8.8□□□□□ -1
CTNNB1-213ENST00000482042 QSER1Q2KHR3 1735 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 HTATSF1O43719 755 aaKnown RBP8.79□□□□□ -1
CTNNB1-213ENST00000482042 PHKG2P15735 406 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 EPB42P16452 691 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 GRNP28799 593 aaKnown RBP8.79□□□□□ -1
CTNNB1-213ENST00000482042 INPP5BP32019 993 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 IDH3AP50213 366 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 LMOD3Q0VAK6 560 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 SF3B2Q13435 895 aaKnown RBP8.79□□□□□ -1
CTNNB1-213ENST00000482042 SUZ12Q15022 739 aaKnown RBP8.79□□□□□ -1
CTNNB1-213ENST00000482042 C11orf91Q3C1V1 193 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 ZNF530Q6P9A1 599 aaPredicted RBP8.79□□□□□ -1
CTNNB1-213ENST00000482042 AEBP1Q8IUX7 1158 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 DDX54Q8TDD1 881 aaKnown RBP8.79□□□□□ -1
CTNNB1-213ENST00000482042 BHMTQ93088 406 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 TRIM11Q96F44 468 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 GSX2Q9BZM3 304 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 PRDM6Q9NQX0 595 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 C5P01031 1676 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 MAP3K5Q99683 1374 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 LAMB4A4D0S4 1761 aa8.79□□□□□ -1
CTNNB1-213ENST00000482042 GNAT3A8MTJ3 354 aa8.78□□□□□ -1
CTNNB1-213ENST00000482042 PROCP04070 461 aa8.78□□□□□ -1
CTNNB1-213ENST00000482042 NGEFQ8N5V2 710 aa8.78□□□□□ -1
CTNNB1-213ENST00000482042 MARCH10Q8NA82 808 aaPredicted RBP8.78□□□□□ -1
CTNNB1-213ENST00000482042 PNISRQ8TF01 805 aaKnown RBP8.78□□□□□ -1
CTNNB1-213ENST00000482042 RTF1Q92541 710 aaKnown RBP8.78□□□□□ -1
CTNNB1-213ENST00000482042 PBXIP1Q96AQ6 731 aa8.78□□□□□ -1
CTNNB1-213ENST00000482042 SPOCK3Q9BQ16 436 aa8.78□□□□□ -1
CTNNB1-213ENST00000482042 STARD13Q9Y3M8 1113 aa8.78□□□□□ -1
CTNNB1-213ENST00000482042 MRC1P22897 1456 aa8.78□□□□□ -1
CTNNB1-213ENST00000482042 COL5A3P25940 1745 aaPredicted RBP8.77□□□□□ -1.01
CTNNB1-213ENST00000482042 NUP188Q5SRE5 1749 aa8.77□□□□□ -1.01
CTNNB1-213ENST00000482042 ERVV-2B6SEH9 535 aa8.77□□□□□ -1.01
CTNNB1-213ENST00000482042 MSTNO14793 375 aa8.77□□□□□ -1.01
CTNNB1-213ENST00000482042 PRMT3O60678 531 aa8.77□□□□□ -1.01
CTNNB1-213ENST00000482042 ARSDP51689 593 aa8.77□□□□□ -1.01
CTNNB1-213ENST00000482042 MTHFSDQ2M296 383 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms