RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 OXCT1P55809 520 aa6.97□□□□□ -1.29
CMSS1-204ENST00000479555 RPS26P11Q5JNZ5 115 aaPredicted RBP6.97□□□□□ -1.29
CMSS1-204ENST00000479555 MPRIPQ6WCQ1 1025 aa6.97□□□□□ -1.29
CMSS1-204ENST00000479555 DTHD1Q6ZMT9 781 aa6.97□□□□□ -1.29
CMSS1-204ENST00000479555 CSRNP1Q96S65 589 aa6.97□□□□□ -1.29
CMSS1-204ENST00000479555 SYNGAP1Q96PV0 1343 aa6.97□□□□□ -1.29
CMSS1-204ENST00000479555 AOC3Q16853 763 aa6.96□□□□□ -1.3
CMSS1-204ENST00000479555 LCE4AQ5TA78 99 aa6.96□□□□□ -1.3
CMSS1-204ENST00000479555 UBE3DQ7Z6J8 389 aa6.96□□□□□ -1.3
CMSS1-204ENST00000479555 FAM168AQ92567 244 aa6.96□□□□□ -1.3
CMSS1-204ENST00000479555 CSADQ9Y600 493 aa6.96□□□□□ -1.3
CMSS1-204ENST00000479555 RBAK-RBAKDNI3L0D1 243 aa6.95□□□□□ -1.3
CMSS1-204ENST00000479555 CEACAM5P06731 702 aa6.95□□□□□ -1.3
CMSS1-204ENST00000479555 MAP1SQ66K74 1059 aaPredicted RBP6.95□□□□□ -1.3
CMSS1-204ENST00000479555 ARHGAP27Q6ZUM4 889 aa6.95□□□□□ -1.3
CMSS1-204ENST00000479555 SULF2Q8IWU5 870 aa6.95□□□□□ -1.3
CMSS1-204ENST00000479555 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
CMSS1-204ENST00000479555 DNAJC25Q9H1X3 360 aa6.95□□□□□ -1.3
CMSS1-204ENST00000479555 TRAK1Q9UPV9 953 aa6.95□□□□□ -1.3
CMSS1-204ENST00000479555 USTQ9Y2C2 406 aa6.95□□□□□ -1.3
CMSS1-204ENST00000479555 PRKCQQ04759 706 aa6.94□□□□□ -1.3
CMSS1-204ENST00000479555 IFI16Q16666 785 aaKnown RBP6.94□□□□□ -1.3
CMSS1-204ENST00000479555 PI4K2BQ8TCG2 481 aa6.94□□□□□ -1.3
CMSS1-204ENST00000479555 HEXIM2Q96MH2 286 aaKnown RBP6.94□□□□□ -1.3
CMSS1-204ENST00000479555 SSU72Q9NP77 194 aaKnown RBP6.94□□□□□ -1.3
CMSS1-204ENST00000479555 KRT82Q9NSB4 513 aa6.94□□□□□ -1.3
CMSS1-204ENST00000479555 TMEM39AQ9NV64 488 aa6.94□□□□□ -1.3
CMSS1-204ENST00000479555 BIN1O00499 593 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 B4GALNT3Q6L9W6 998 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 ATG4DQ86TL0 474 aaPredicted RBP6.93□□□□□ -1.3
CMSS1-204ENST00000479555 TXNDC2Q86VQ3 553 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.93□□□□□ -1.3
CMSS1-204ENST00000479555 GPBAR1Q8TDU6 330 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 HRASLS5Q96KN8 279 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 KRTAP17-1Q9BYP8 105 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 BCO2Q9BYV7 579 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 VAV3Q9UKW4 847 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 PCOLCE2Q9UKZ9 415 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 AKAP2Q9Y2D5 859 aa6.93□□□□□ -1.3
CMSS1-204ENST00000479555 ZC3H12AQ5D1E8 599 aaKnown RBP6.92□□□□□ -1.3
CMSS1-204ENST00000479555 PPM1JQ5JR12 505 aa6.92□□□□□ -1.3
CMSS1-204ENST00000479555 PPP2R3AQ06190 1150 aa6.91□□□□□ -1.3
CMSS1-204ENST00000479555 NXPE4Q6UWF7 544 aa6.91□□□□□ -1.3
CMSS1-204ENST00000479555 GRIN3AQ8TCU5 1115 aa6.91□□□□□ -1.3
CMSS1-204ENST00000479555 CITED4Q96RK1 184 aa6.91□□□□□ -1.3
CMSS1-204ENST00000479555 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
CMSS1-204ENST00000479555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.91□□□□□ -1.3
CMSS1-204ENST00000479555 DCDC2CA8MYV0 355 aa6.9□□□□□ -1.3
CMSS1-204ENST00000479555 SUPT5HO00267 1087 aaKnown RBP6.9□□□□□ -1.3
CMSS1-204ENST00000479555 FBXO24O75426 580 aa6.9□□□□□ -1.3
CMSS1-204ENST00000479555 ARNTP27540 789 aa6.9□□□□□ -1.3
CMSS1-204ENST00000479555 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.9□□□□□ -1.3
CMSS1-204ENST00000479555 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
CMSS1-204ENST00000479555 TMC7Q7Z402 723 aa6.9□□□□□ -1.3
CMSS1-204ENST00000479555 RNF214Q8ND24 703 aa6.9□□□□□ -1.3
CMSS1-204ENST00000479555 ACSBG1Q96GR2 724 aa6.9□□□□□ -1.3
CMSS1-204ENST00000479555 NLRP2Q9NX02 1062 aa6.9□□□□□ -1.3
CMSS1-204ENST00000479555 TMEM265A0A087WTH1 108 aa6.89□□□□□ -1.31
CMSS1-204ENST00000479555 PAGE1O75459 146 aa6.89□□□□□ -1.31
CMSS1-204ENST00000479555 FARP2O94887 1054 aaPredicted RBP6.89□□□□□ -1.31
CMSS1-204ENST00000479555 NTF4P34130 210 aa6.89□□□□□ -1.31
CMSS1-204ENST00000479555 RASIP1Q5U651 963 aa6.89□□□□□ -1.31
CMSS1-204ENST00000479555 ANGEL2Q5VTE6 544 aaKnown RBP6.89□□□□□ -1.31
CMSS1-204ENST00000479555 ALKBH8Q96BT7 664 aaKnown RBP6.89□□□□□ -1.31
CMSS1-204ENST00000479555 ARID3AQ99856 593 aa6.89□□□□□ -1.31
CMSS1-204ENST00000479555 RBCK1Q9BYM8 510 aa6.89□□□□□ -1.31
CMSS1-204ENST00000479555 ERVK-24P63145 666 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 ZNF252P-AS1Q0IIN9 211 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 IKZF1Q13422 519 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 TPTE2Q6XPS3 522 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 C12orf40Q86WS4 652 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 RETREG2Q8NC44 543 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 DMRTB1Q96MA1 342 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 SETDB2Q96T68 719 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 TNKS2Q9H2K2 1166 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
CMSS1-204ENST00000479555 PNMA6FA0A0J9YX94 578 aa6.87□□□□□ -1.31
CMSS1-204ENST00000479555 DBX1A6NMT0 343 aa6.87□□□□□ -1.31
CMSS1-204ENST00000479555 NME2P22392 152 aa6.87□□□□□ -1.31
CMSS1-204ENST00000479555 NKPD1Q17RQ9 610 aa6.87□□□□□ -1.31
CMSS1-204ENST00000479555 FYB2Q5VWT5 728 aa6.87□□□□□ -1.31
CMSS1-204ENST00000479555 SPOCD1Q6ZMY3 1216 aa6.87□□□□□ -1.31
CMSS1-204ENST00000479555 C3orf58Q8NDZ4 430 aa6.87□□□□□ -1.31
CMSS1-204ENST00000479555 ZP2Q05996 745 aa6.86□□□□□ -1.31
CMSS1-204ENST00000479555 MESP2Q0VG99 397 aa6.86□□□□□ -1.31
CMSS1-204ENST00000479555 SLC23A3Q6PIS1 610 aa6.86□□□□□ -1.31
CMSS1-204ENST00000479555 KSR1Q8IVT5 923 aa6.86□□□□□ -1.31
CMSS1-204ENST00000479555 TMEM40Q8WWA1 233 aa6.86□□□□□ -1.31
CMSS1-204ENST00000479555 KRTAP4-11Q9BYQ6 195 aa6.86□□□□□ -1.31
CMSS1-204ENST00000479555 PRDM10Q9NQV6 1147 aa6.86□□□□□ -1.31
CMSS1-204ENST00000479555 ZNF503-AS2A6NEH8 195 aa6.85□□□□□ -1.31
CMSS1-204ENST00000479555 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
CMSS1-204ENST00000479555 SOWAHDA6NJG2 315 aa6.85□□□□□ -1.31
CMSS1-204ENST00000479555 ENC1O14682 589 aa6.85□□□□□ -1.31
CMSS1-204ENST00000479555 BMP6P22004 513 aa6.85□□□□□ -1.31
CMSS1-204ENST00000479555 MLANAQ16655 118 aa6.85□□□□□ -1.31
CMSS1-204ENST00000479555 LIN37Q96GY3 246 aaPredicted RBP6.85□□□□□ -1.31
CMSS1-204ENST00000479555 NECAB3Q96P71 396 aaPredicted RBP6.85□□□□□ -1.31
CMSS1-204ENST00000479555 PICK1Q9NRD5 415 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms