RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, human

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGSM3-209	ENST00000478085	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	MYO5B	Q9ULV0	1848 aa		13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	DEXI	O95424	95 aa		13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	GRAP	Q13588	217 aa		13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	ZNF654	Q8IZM8	581 aa		13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	LCORL	Q8N3X6	602 aa		13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	GRAPL	Q8TC17	118 aa	Predicted RBP	13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	GTF3C6	Q969F1	213 aa		13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	DHX58	Q96C10	678 aa		13.58	□□□□□ -0.24
SGSM3-209	ENST00000478085	MEGF6	O75095	1541 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	ECM2	O94769	699 aa	Predicted RBP	13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	CYP2E1	P05181	493 aa	Predicted RBP	13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	BRAP	Q7Z569	592 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	SUPT20H	Q8NEM7	779 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	PLIN2	Q99541	437 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	CLIP2	Q9UDT6	1046 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	SIGLEC1	Q9BZZ2	1709 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	CYP2D7	A0A087X1C5	515 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	CBFA2T2	O43439	604 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	KRT40	Q6A162	431 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	NCOA3	Q9Y6Q9	1424 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	TNKS	O95271	1327 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	POLR1A	O95602	1720 aa	Predicted RBP	13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	SCARF1	Q14162	830 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	RABL6	Q3YEC7	729 aa	Predicted RBP	13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	PPP4R3B	Q5MIZ7	849 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	LINC00116	Q8NCU8	138 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	SMARCC2	Q8TAQ2	1214 aa		13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	RBM28	Q9NW13	759 aa	Known RBP	13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.57	□□□□□ -0.24
SGSM3-209	ENST00000478085	CPLX3	Q8WVH0	158 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	DNAJC25	Q9H1X3	360 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	GNA11	P29992	359 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	EN1	Q05925	392 aa	Predicted RBP	13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	STX1A	Q16623	288 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	ANO6	Q4KMQ2	910 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	ATG9A	Q7Z3C6	839 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	DCC	P43146	1447 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	CHGB	P05060	677 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	NECTIN1	Q15223	517 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	LETM2	Q2VYF4	491 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	BARGIN	Q6ZT62	677 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	VPS54	Q9P1Q0	977 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	GADD45B	O75293	160 aa	Predicted RBP	13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	ADCY5	O95622	1261 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	BRD1	O95696	1058 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	PLS1	Q14651	629 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	SPECC1	Q5M775	1068 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	CDHR2	Q9BYE9	1310 aa		13.56	□□□□□ -0.24
SGSM3-209	ENST00000478085	PRDX5	P30044	214 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	SLC1A4	P43007	532 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	PIK3AP1	Q6ZUJ8	805 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	ZNF274	Q96GC6	653 aa	Predicted RBP	13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	COL3A1	P02461	1466 aa	Predicted RBP	13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	USP32	Q8NFA0	1604 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	VWA3A	A6NCI4	1184 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	BMP15	O95972	392 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	PDIA3	P30101	505 aa	Known RBP	13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	GPHN	Q9NQX3	736 aa	Predicted RBP	13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	CAMTA2	O94983	1202 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	FANCB	Q8NB91	859 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	MNS1	Q8NEH6	495 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	UIMC1	Q96RL1	719 aa		13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.55	□□□□□ -0.24
SGSM3-209	ENST00000478085	SPDYE3	A6NKU9	549 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	GRM1	Q13255	1194 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	FCHSD1	Q86WN1	690 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	CERS3	Q8IU89	383 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	DEF6	Q9H4E7	631 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	RIPOR2	Q9Y4F9	1068 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	TCP10L2	B9ZVM9	353 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	RAD17	O75943	681 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	STAT6	P42226	847 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	ZNF34	Q8IZ26	560 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	GOLGA8H	P0CJ92	632 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	MECOM	Q03112	1051 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	JAKMIP3	Q5VZ66	844 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	ANO1	Q5XXA6	986 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	KANK3	Q6NY19	840 aa		13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.54	□□□□□ -0.24
SGSM3-209	ENST00000478085	SCRN1	Q12765	414 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	NOM1	Q5C9Z4	860 aa	Known RBP	13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	ATP8A2	Q9NTI2	1148 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	SEMA3E	O15041	775 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	C21orf2	O43822	256 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	SFPQ	P23246	707 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	PNMA1	Q8ND90	353 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	EHMT1	Q9H9B1	1298 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	INCENP	Q9NQS7	918 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	ITSN1	Q15811	1721 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085		A0A0U1RQG5	324 aa	Predicted RBP	13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	PFKFB2	O60825	505 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	USP17L8	P0C7I0	530 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	LMOD1	P29536	600 aa	Predicted RBP	13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	AMPD3	Q01432	767 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	RILPL1	Q5EBL4	403 aa		13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	LEO1	Q8WVC0	666 aa	Predicted RBP	13.53	□□□□□ -0.24
SGSM3-209	ENST00000478085	CLRN2	A0PK11	232 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms