RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 PSMD2Q13200 908 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 WHAMMP3Q1A5X7 153 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 DHX32Q7L7V1 743 aaKnown RBP12.01□□□□□ -0.49
ABCF1-205ENST00000475993 CTAGE6Q86UF2 777 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 POTEDQ86YR6 584 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 CTAGE4Q8IX94 777 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 IGSF22Q8N9C0 903 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 STAG1Q8WVM7 1258 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 TLR7Q9NYK1 1049 aaKnown RBP12.01□□□□□ -0.49
ABCF1-205ENST00000475993 MROH7-TTC4A0A0A0MT08 1334 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 EBAG9O00559 213 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 FDPSP14324 419 aaKnown RBP12.01□□□□□ -0.49
ABCF1-205ENST00000475993 CCT5P48643 541 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 STOX1Q6ZVD7 989 aa12.01□□□□□ -0.49
ABCF1-205ENST00000475993 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
ABCF1-205ENST00000475993 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
ABCF1-205ENST00000475993 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 LAMA4Q16363 1823 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 CTAGE9A4FU28 777 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 PI4KAP2A4QPH2 592 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 AP1G2O75843 785 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 PI4KAP1Q8N8J0 262 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 PANX2Q96RD6 677 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 HPCAL4Q9UM19 191 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 SOWAHDA6NJG2 315 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 TFRCP02786 760 aaKnown RBP12□□□□□ -0.49
ABCF1-205ENST00000475993 MYBL2P10244 700 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 NF2P35240 595 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 DDR1Q08345 913 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 MYSM1Q5VVJ2 828 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 OLFM4Q6UX06 510 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 HPSEQ9Y251 543 aa12□□□□□ -0.49
ABCF1-205ENST00000475993 A0A0U1RQJ8 604 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 EME2A4GXA9 379 aaPredicted RBP11.99□□□□□ -0.49
ABCF1-205ENST00000475993 GNAT3A8MTJ3 354 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 GCFC2P16383 781 aaKnown RBP11.99□□□□□ -0.49
ABCF1-205ENST00000475993 ZNF18P17022 549 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 EXOSC10Q01780 885 aaKnown RBP11.99□□□□□ -0.49
ABCF1-205ENST00000475993 ZNF569Q5MCW4 686 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 NOA1Q8NC60 698 aaKnown RBP11.99□□□□□ -0.49
ABCF1-205ENST00000475993 ATRIPQ8WXE1 791 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 SMARCC1Q92922 1105 aaPredicted RBP11.99□□□□□ -0.49
ABCF1-205ENST00000475993 SYKP43405 635 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 IRAK1P51617 712 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 RAD9BQ6WBX8 426 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 USP31Q70CQ4 1352 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 ZNF483Q8TF39 744 aaPredicted RBP11.99□□□□□ -0.49
ABCF1-205ENST00000475993 KAT14Q9H8E8 782 aa11.99□□□□□ -0.49
ABCF1-205ENST00000475993 PPFIA3O75145 1194 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 POLR3DP05423 398 aaPredicted RBP11.98□□□□□ -0.49
ABCF1-205ENST00000475993 PDIA3P30101 505 aaKnown RBP11.98□□□□□ -0.49
ABCF1-205ENST00000475993 INPP5BP32019 993 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 PNOCQ13519 176 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 RASGRP2Q7LDG7 609 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 BRAPQ7Z569 592 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 IL17REQ8NFR9 667 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 ZNF274Q96GC6 653 aaPredicted RBP11.98□□□□□ -0.49
ABCF1-205ENST00000475993 NAA15Q9BXJ9 866 aaKnown RBP11.98□□□□□ -0.49
ABCF1-205ENST00000475993 MED1Q15648 1581 aaPredicted RBP11.98□□□□□ -0.49
ABCF1-205ENST00000475993 IGSF1Q8N6C5 1336 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 ATXN2Q99700 1313 aaKnown RBP11.98□□□□□ -0.49
ABCF1-205ENST00000475993 FRMD3A2A2Y4 597 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 GPTP24298 496 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 RDXP35241 583 aaKnown RBP11.98□□□□□ -0.49
ABCF1-205ENST00000475993 PDE4BQ07343 736 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 ANO1Q5XXA6 986 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 CCDC26Q8TAB7 109 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 FMN2Q9NZ56 1722 aa11.98□□□□□ -0.49
ABCF1-205ENST00000475993 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 FAM237AA0A1B0GTK4 181 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 AKR1B15C9JRZ8 316 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-205ENST00000475993 ATP2B2Q01814 1243 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 C1QTNF12Q5T7M4 302 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 SLC35F6Q8N357 371 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 XAGE2Q96GT9 111 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 CABS1Q96KC9 395 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 NAPGQ99747 312 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-205ENST00000475993 ZNF609O15014 1411 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 RICTORQ6R327 1708 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 RFX7Q2KHR2 1363 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.492e-7■■■■□ 21.1
ABCF1-205ENST00000475993 BMP6P22004 513 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 CDC27P30260 824 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 PDE6BP35913 854 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 OTUD7BQ6GQQ9 843 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 FOXP4Q8IVH2 680 aaPredicted RBP11.97□□□□□ -0.49
ABCF1-205ENST00000475993 FAM76AQ8TAV0 307 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 COG1Q8WTW3 980 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
ABCF1-205ENST00000475993 SH3GL3Q99963 347 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 MCM8Q9UJA3 840 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 DIP2CQ9Y2E4 1556 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 COQ9O75208 318 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 FNTAP49354 379 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 AMPD2Q01433 879 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 MTA1Q13330 715 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 NR1I3Q14994 352 aa11.97□□□□□ -0.49
ABCF1-205ENST00000475993 SLC39A14Q15043 492 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms