RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SYAP1Q96A49 352 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 SRRTQ9BXP5 876 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 TMX1Q9H3N1 280 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 ENAMQ9NRM1 1142 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 POLR3EQ9NVU0 708 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 USP25Q9UHP3 1055 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 IL16Q14005 1332 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 KIF16BQ96L93 1317 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 DUOX2Q9NRD8 1548 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 RCCD1A6NED2 376 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 SKILP12757 684 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 SERPINB4P48594 390 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 DDB1Q16531 1140 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 RC3H1Q5TC82 1133 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 CTR9Q6PD62 1173 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 WAPLQ7Z5K2 1190 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 SAMD14Q8IZD0 417 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 JARID2Q92833 1246 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 TATDN2Q93075 761 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 ZNF496Q96IT1 587 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 RNPC3Q96LT9 517 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 ZNF396Q96N95 335 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 GPR101Q96P66 508 aaPredicted RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 EYA1Q99502 592 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 XPO4Q9C0E2 1151 aaKnown RBP7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 ZNF700Q9H0M5 742 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 RNF181Q9P0P0 153 aa7.16□□□□□ -1.26
SMARCE1-208ENST00000474246 FIBPO43427 364 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 PKN2Q16513 984 aaKnown RBP7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 PLEKHG4Q58EX7 1191 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 ANKRD45Q5TZF3 282 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 EP400NLQ6ZTU2 488 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 USP48Q86UV5 1035 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 PACS2Q86VP3 889 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 IFNL3Q8IZI9 196 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 TAF4BQ92750 862 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 TMEM87BQ96K49 555 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 GTPBP4Q9BZE4 634 aaKnown RBP7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 DNAJC25Q9H1X3 360 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 FAM217BQ9NTX9 383 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 THSD7BQ9C0I4 1608 aa7.15□□□□□ -1.26
SMARCE1-208ENST00000474246 PAPPAQ13219 1627 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 GTPBP10A4D1E9 387 aaKnown RBP7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 GLTPD2A6NH11 291 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 PRSS47A8MTI9 375 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 NBPF26B4DH59 902 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 SRGNP10124 158 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 GEMIN4P57678 1058 aaKnown RBP7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 Q3C1V9 767 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 GRAMD1BQ3KR37 738 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 TMEM259Q4ZIN3 620 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 ACBD5Q5T8D3 534 aaPredicted RBP7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 DMRTA1Q5VZB9 504 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 CLASRPQ8N2M8 674 aaKnown RBP7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 GIMAP1Q8WWP7 306 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 CDK5RAP3Q96JB5 506 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 LZTS2Q9BRK4 669 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 ZBED2Q9BTP6 218 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 KIAA1468Q9P260 1216 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 XPO7Q9UIA9 1087 aaKnown RBP7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 HPS5Q9UPZ3 1129 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 BCL9O00512 1426 aa7.15□□□□□ -1.27
SMARCE1-208ENST00000474246 PKD1L3Q7Z443 1732 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 KIF7Q2M1P5 1343 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 ATP7BP35670 1465 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 ARHGAP33O14559 1287 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 CCP110O43303 1012 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 HOXC13P31276 330 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 RASA3Q14644 834 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 AMOTQ4VCS5 1084 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 ALFQ53S48 1182 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 JAKMIP3Q5VZ66 844 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 TNS3Q68CZ2 1445 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 SPATA31E1Q6ZUB1 1445 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 DAAM2Q86T65 1068 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 C11orf74Q86VG3 221 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 ACBD3Q9H3P7 528 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 DCAF16Q9NXF7 216 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 TFCP2L1Q9NZI6 479 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 UNC79Q9P2D8 2635 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 MKL2Q9ULH7 1088 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 NRXN3Q9Y4C0 1643 aa7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 XRN1Q8IZH2 1706 aaKnown RBP7.14□□□□□ -1.27
SMARCE1-208ENST00000474246 TECPR2O15040 1411 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 PRRT4C9JH25 899 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 TCEA3O75764 348 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 TNNI2P48788 182 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 SLC4A8Q2Y0W8 1093 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 CT47A1Q5JQC4 288 aaPredicted RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 SPECC1Q5M775 1068 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 ALKBH2Q6NS38 261 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 CTU1Q7Z7A3 348 aaKnown RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 TCP11L2Q8N4U5 519 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 ZFPM2Q8WW38 1151 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 RPGRQ92834 1020 aaKnown RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 TBC1D31Q96DN5 1066 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 TRIM6Q9C030 488 aaPredicted RBP7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 HOXC10Q9NYD6 342 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 PARP2Q9UGN5 583 aa7.13□□□□□ -1.27
SMARCE1-208ENST00000474246 PAXBP1Q9Y5B6 917 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms