RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 MGAMO43451 1857 aa12.06□□□□□ -0.48
MCF2L-223ENST00000473345 CXCL11O14625 94 aa12.06□□□□□ -0.48
MCF2L-223ENST00000473345 PEX10O60683 326 aa12.06□□□□□ -0.48
MCF2L-223ENST00000473345 INHAP05111 366 aa12.06□□□□□ -0.48
MCF2L-223ENST00000473345 SLC5A1P13866 664 aa12.06□□□□□ -0.48
MCF2L-223ENST00000473345 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
MCF2L-223ENST00000473345 TRIM32Q13049 653 aa12.06□□□□□ -0.48
MCF2L-223ENST00000473345 TREML2Q5T2D2 321 aa12.06□□□□□ -0.48
MCF2L-223ENST00000473345 FAM9BQ8IZU0 186 aa12.06□□□□□ -0.48
MCF2L-223ENST00000473345 PTPRFP10586 1907 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 ADCY3O60266 1144 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 FARP2O94887 1054 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-223ENST00000473345 SGPL1O95470 568 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 ATP2B3Q16720 1220 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 SCYL3Q8IZE3 742 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 CDCA7LQ96GN5 454 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 PARK7Q99497 189 aaKnown RBP12.05□□□□□ -0.48
MCF2L-223ENST00000473345 IDI2Q9BXS1 227 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 MYH13Q9UKX3 1938 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 SALL1Q9NSC2 1324 aa12.05□□□□□ -0.48
MCF2L-223ENST00000473345 DOCK2Q92608 1830 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
MCF2L-223ENST00000473345 FCGRTP55899 365 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 RHBDL3P58872 404 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 JAG1P78504 1218 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-223ENST00000473345 PI16Q6UXB8 463 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 GADL1Q6ZQY3 521 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 HOOK2Q96ED9 719 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 DEFB118Q96PH6 123 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 CRISPLD2Q9H0B8 497 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 PAK6Q9NQU5 681 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-223ENST00000473345 STAP2Q9UGK3 403 aa12.04□□□□□ -0.48
MCF2L-223ENST00000473345 TRIM75PA6NK02 468 aa12.03□□□□□ -0.48
MCF2L-223ENST00000473345 TIMM10P62072 90 aa12.03□□□□□ -0.48
MCF2L-223ENST00000473345 CCDC102BQ68D86 513 aa12.03□□□□□ -0.48
MCF2L-223ENST00000473345 ANKRD13CQ8N6S4 541 aa12.03□□□□□ -0.48
MCF2L-223ENST00000473345 SLAIN1Q8ND83 568 aa12.03□□□□□ -0.48
MCF2L-223ENST00000473345 BIN2Q9UBW5 565 aaPredicted RBP12.03□□□□□ -0.48
MCF2L-223ENST00000473345 PTPRCP08575 1304 aa12.03□□□□□ -0.48
MCF2L-223ENST00000473345 DOCK1Q14185 1865 aa12.02□□□□□ -0.48
MCF2L-223ENST00000473345 LAMA3Q16787 3333 aa12.02□□□□□ -0.49
MCF2L-223ENST00000473345 ENTPD3O75355 529 aa12.02□□□□□ -0.49
MCF2L-223ENST00000473345 CIAO1O76071 339 aa12.02□□□□□ -0.49
MCF2L-223ENST00000473345 HOXD10P28358 340 aa12.02□□□□□ -0.49
MCF2L-223ENST00000473345 PICALMQ13492 652 aa12.02□□□□□ -0.49
MCF2L-223ENST00000473345 POTEEQ6S8J3 1075 aa12.02□□□□□ -0.49
MCF2L-223ENST00000473345 NKX2-3Q8TAU0 364 aa12.02□□□□□ -0.49
MCF2L-223ENST00000473345 PAWRQ96IZ0 340 aaKnown RBP12.02□□□□□ -0.49
MCF2L-223ENST00000473345 GJD2Q9UKL4 321 aa12.02□□□□□ -0.49
MCF2L-223ENST00000473345 LRRFIP2Q9Y608 721 aaKnown RBP12.02□□□□□ -0.49
MCF2L-223ENST00000473345 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-223ENST00000473345 BTDP43251 543 aa12.01□□□□□ -0.49
MCF2L-223ENST00000473345 UBXN2AP68543 259 aa12.01□□□□□ -0.49
MCF2L-223ENST00000473345 SLFN5Q08AF3 891 aa12.01□□□□□ -0.49
MCF2L-223ENST00000473345 IRF5Q13568 498 aa12.01□□□□□ -0.49
MCF2L-223ENST00000473345 MEIS3Q99687 375 aa12.01□□□□□ -0.49
MCF2L-223ENST00000473345 PLXNB2O15031 1838 aa12.01□□□□□ -0.49
MCF2L-223ENST00000473345 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
MCF2L-223ENST00000473345 COL6A3P12111 3177 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 SIPA1L1O43166 1804 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 DOCK3Q8IZD9 2030 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 TNPO2O14787 897 aaKnown RBP12□□□□□ -0.49
MCF2L-223ENST00000473345 CTNND1O60716 968 aaKnown RBP12□□□□□ -0.49
MCF2L-223ENST00000473345 MECOMQ03112 1051 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 TBC1D9Q6ZT07 1266 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 Q7L0L9 218 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 FASTKD5Q7L8L6 764 aaKnown RBP12□□□□□ -0.49
MCF2L-223ENST00000473345 PXYLP1Q8TE99 480 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
MCF2L-223ENST00000473345 GDF15Q99988 308 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 HTATIP2Q9BUP3 242 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 CEP126Q9P2H0 1117 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 AGTPBP1Q9UPW5 1226 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 TNNQ9UQP3 1299 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 SLC45A1Q9Y2W3 748 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 LOC285556D6RIA3 1793 aa12□□□□□ -0.49
MCF2L-223ENST00000473345 AK9Q5TCS8 1911 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 GPR75-ASB3A0A0A6YYF3 556 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 ZBTB22O15209 634 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 ANP32CO43423 234 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 TFRCP02786 760 aaKnown RBP11.99□□□□□ -0.49
MCF2L-223ENST00000473345 TFCP2Q12800 502 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
MCF2L-223ENST00000473345 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.99□□□□□ -0.49
MCF2L-223ENST00000473345 COPRSQ9NQ92 184 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 PICK1Q9NRD5 415 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 ZMYND8Q9ULU4 1186 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-223ENST00000473345 MROH7-TTC4A0A0A0MT08 1334 aa11.99□□□□□ -0.49
MCF2L-223ENST00000473345 DLL1O00548 723 aa11.98□□□□□ -0.49
MCF2L-223ENST00000473345 EVI5O60447 810 aa11.98□□□□□ -0.49
MCF2L-223ENST00000473345 SYN1P17600 705 aa11.98□□□□□ -0.49
MCF2L-223ENST00000473345 HMGCS2P54868 508 aa11.98□□□□□ -0.49
MCF2L-223ENST00000473345 SPP2Q13103 211 aa11.98□□□□□ -0.49
MCF2L-223ENST00000473345 ZSCAN29Q8IWY8 852 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-223ENST00000473345 TRIB2Q92519 343 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 305.6 ms