RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 GOLGA8FQ08AF8 430 aa20.64■□□□□ 0.89
MCF2L-221ENST00000469415 GOLGA8DPQ0D2H9 430 aa20.64■□□□□ 0.89
MCF2L-221ENST00000469415 AXDND1Q5T1B0 1012 aaPredicted RBP20.64■□□□□ 0.89
MCF2L-221ENST00000469415 NACAP1Q9BZK3 213 aa20.64■□□□□ 0.89
MCF2L-221ENST00000469415 SRP68Q9UHB9 627 aaKnown RBP20.64■□□□□ 0.89
MCF2L-221ENST00000469415 UBAC1Q9BSL1 405 aa20.63■□□□□ 0.89
MCF2L-221ENST00000469415 POLR3EQ9NVU0 708 aa20.63■□□□□ 0.89
MCF2L-221ENST00000469415 TMC6Q7Z403 805 aa20.63■□□□□ 0.89
MCF2L-221ENST00000469415 BRAPQ7Z569 592 aa20.63■□□□□ 0.89
MCF2L-221ENST00000469415 GRAMD1CQ8IYS0 662 aa20.63■□□□□ 0.89
MCF2L-221ENST00000469415 OXER1Q8TDS5 423 aa20.63■□□□□ 0.89
MCF2L-221ENST00000469415 CELF1Q92879 486 aaKnown RBP20.63■□□□□ 0.89
MCF2L-221ENST00000469415 SPTLC3Q9NUV7 552 aa20.63■□□□□ 0.89
MCF2L-221ENST00000469415 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.63■□□□□ 0.89
MCF2L-221ENST00000469415 V9GYY5 206 aaPredicted RBP20.63■□□□□ 0.89
MCF2L-221ENST00000469415 ZNF827Q17R98 1081 aa20.62■□□□□ 0.89
MCF2L-221ENST00000469415 SHC4Q6S5L8 630 aa20.62■□□□□ 0.89
MCF2L-221ENST00000469415 DIS3L2Q8IYB7 885 aaKnown RBP20.62■□□□□ 0.89
MCF2L-221ENST00000469415 MYO5AQ9Y4I1 1855 aaKnown RBP20.62■□□□□ 0.89
MCF2L-221ENST00000469415 FAM205CA6NFA0 338 aa20.62■□□□□ 0.89
MCF2L-221ENST00000469415 DYNC1I1O14576 645 aa20.62■□□□□ 0.89
MCF2L-221ENST00000469415 CDKL5O76039 1030 aa20.62■□□□□ 0.89
MCF2L-221ENST00000469415 RTN1Q16799 776 aa20.62■□□□□ 0.89
MCF2L-221ENST00000469415 XPO4Q9C0E2 1151 aaKnown RBP20.62■□□□□ 0.89
MCF2L-221ENST00000469415 NTRK3Q16288 839 aa20.62■□□□□ 0.89
MCF2L-221ENST00000469415 YEATS4O95619 227 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 NTSR2O95665 410 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 SLC39A14Q15043 492 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 NAT10Q9H0A0 1025 aaKnown RBP20.61■□□□□ 0.89
MCF2L-221ENST00000469415 TPM3P06753 285 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 ANKRD18AQ8IVF6 992 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 LRRC8AQ8IWT6 810 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 TMEM87BQ96K49 555 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 PDCL3Q9H2J4 239 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 UBR2Q8IWV8 1755 aa20.61■□□□□ 0.89
MCF2L-221ENST00000469415 ABCC6O95255 1503 aa20.6■□□□□ 0.89
MCF2L-221ENST00000469415 LONRF3Q496Y0 759 aa20.6■□□□□ 0.89
MCF2L-221ENST00000469415 NWD2Q9ULI1 1742 aa20.6■□□□□ 0.89
MCF2L-221ENST00000469415 NMT2O60551 498 aa20.6■□□□□ 0.89
MCF2L-221ENST00000469415 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.6■□□□□ 0.89
MCF2L-221ENST00000469415 VPS54Q9P1Q0 977 aa20.6■□□□□ 0.89
MCF2L-221ENST00000469415 PPARAQ07869 468 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 SART3Q15020 963 aaKnown RBP20.59■□□□□ 0.89
MCF2L-221ENST00000469415 ATL3Q6DD88 541 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 C8orf37Q96NL8 207 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 BCL2L12Q9HB09 334 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 CABP5Q9NP86 173 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 MAGEB6P1A0A0J9YX57 407 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 CNNM3Q8NE01 707 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 A0A1W2PQ27 194 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 A0A1W2PQ64 194 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 A0A1W2PQD8 194 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 TERF1P54274 439 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 FAM47AQ5JRC9 791 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 USP49Q70CQ1 688 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 TRIM22Q8IYM9 498 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 PRDM10Q9NQV6 1147 aa20.59■□□□□ 0.89
MCF2L-221ENST00000469415 SAFBQ15424 915 aaKnown RBP eCLIP20.58■□□□□ 0.89
MCF2L-221ENST00000469415 AATFQ9NY61 560 aaKnown RBP eCLIP20.58■□□□□ 0.89
MCF2L-221ENST00000469415 PCDHB6Q9Y5E3 794 aa20.58■□□□□ 0.89
MCF2L-221ENST00000469415 SLIT2O94813 1529 aa20.58■□□□□ 0.89
MCF2L-221ENST00000469415 CMA1P23946 247 aa20.58■□□□□ 0.88
MCF2L-221ENST00000469415 ZNF710Q8N1W2 664 aa20.58■□□□□ 0.88
MCF2L-221ENST00000469415 SPATA31A1Q5TZJ5 1347 aa20.58■□□□□ 0.88
MCF2L-221ENST00000469415 PLEKHG2Q9H7P9 1386 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 CASP1P29466 404 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 ZNF654Q8IZM8 581 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 LINC00116Q8NCU8 138 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 ZNF512BQ96KM6 892 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-221ENST00000469415 TNKSO95271 1327 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 SHANK3Q9BYB0 1731 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 NOM1Q5C9Z4 860 aaKnown RBP20.57■□□□□ 0.88
MCF2L-221ENST00000469415 TBC1D9BQ66K14 1250 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 FBXL16Q8N461 479 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 PRIMPOLQ96LW4 560 aa20.57■□□□□ 0.88
MCF2L-221ENST00000469415 GPR101Q96P66 508 aaPredicted RBP20.57■□□□□ 0.88
MCF2L-221ENST00000469415 CDC5LQ99459 802 aaKnown RBP20.57■□□□□ 0.88
MCF2L-221ENST00000469415 TRMT44Q8IYL2 757 aaKnown RBP20.56■□□□□ 0.88
MCF2L-221ENST00000469415 STAMQ92783 540 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 KRT23Q9C075 422 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 SPDYE4A6NLX3 237 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 COBLO75128 1261 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 SERPINC1P01008 464 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 AKAP17AQ02040 695 aaKnown RBP20.56■□□□□ 0.88
MCF2L-221ENST00000469415 KCNH3Q9ULD8 1083 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 V9GY48 417 aaPredicted RBP20.56■□□□□ 0.88
MCF2L-221ENST00000469415 USP17L12C9JPN9 530 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 USP17L21D6R901 530 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 PARP10Q53GL7 1025 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 DPF2Q92785 391 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 PCDHA5Q9Y5H7 936 aa20.56■□□□□ 0.88
MCF2L-221ENST00000469415 POLR2DO15514 142 aaKnown RBP20.55■□□□□ 0.88
MCF2L-221ENST00000469415 PLEKHA8P1O95397 391 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 CYP2D6P10635 497 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 PTPAQ15257 358 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 CAVIN4Q5BKX8 364 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 FOXP4Q8IVH2 680 aaPredicted RBP20.55■□□□□ 0.88
MCF2L-221ENST00000469415 NOSTRINQ8IVI9 506 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 FANCBQ8NB91 859 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 ABCC12Q96J65 1359 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms