RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 AGBL1Q96MI9 1066 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 GDF15Q99988 308 aa2.83□□□□□ -1.96
NEDD1-204ENST00000457368 ASTN2O75129 1339 aaPredicted RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 MYO3BQ8WXR4 1341 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 SYNGAP1Q96PV0 1343 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 LAMB4A4D0S4 1761 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 GJB1P08034 283 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 NR3C2P08235 984 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 USP17L8P0C7I0 530 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 TNNT2P45379 298 aaPredicted RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 GJA8P48165 433 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 CAP1Q01518 475 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 DDX46Q7L014 1031 aaKnown RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 APOBEC3FQ8IUX4 373 aaKnown RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 PARP9Q8IXQ6 854 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 CD99L2Q8TCZ2 262 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 PANK3Q9H999 370 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 MYOZ2Q9NPC6 264 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 POLLQ9UGP5 575 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 COL2A1P02458 1487 aaPredicted RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 AVPP01185 164 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 HMOX1P09601 288 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 USP46P62068 366 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 CRHR2Q13324 411 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 SLC9C1Q4G0N8 1177 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 TTLL7Q6ZT98 887 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 MOB2Q70IA6 237 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 VASH1Q7L8A9 365 aaPredicted RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 PODNQ7Z5L7 613 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 MTMR14Q8NCE2 650 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 TBC1D16Q8TBP0 767 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 IRF7Q92985 503 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 ZNF395Q9H8N7 513 aaPredicted RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 PTCH2Q9Y6C5 1203 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 FAM205AQ6ZU69 1335 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 PLA2G5P39877 138 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 WNT7BP56706 349 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 SUZ12Q15022 739 aaKnown RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 TAF7Q15545 349 aaPredicted RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 NLRP10Q86W26 655 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 ZSCAN1Q8NBB4 408 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 HELBQ8NG08 1087 aaPredicted RBP2.82□□□□□ -1.96
NEDD1-204ENST00000457368 RSPH6AQ9H0K4 717 aa2.82□□□□□ -1.96
NEDD1-204ENST00000457368 ZNF804BA4D1E1 1349 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 SH3TC1Q8TE82 1336 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 PSME4Q14997 1843 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 FAM177BA6PVY3 158 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 PIP4K2AP48426 406 aaPredicted RBP2.81□□□□□ -1.96
NEDD1-204ENST00000457368 EIF4A1P60842 406 aaKnown RBP2.81□□□□□ -1.96
NEDD1-204ENST00000457368 GPSM2P81274 684 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 TRIM28Q13263 835 aaKnown RBP2.81□□□□□ -1.96
NEDD1-204ENST00000457368 SLC4A8Q2Y0W8 1093 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 SLC10A4Q96EP9 437 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 CNTNAP3BQ96NU0 1288 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 CNTNAP3Q9BZ76 1288 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 DBNDD1Q9H9R9 158 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 SLC24A3Q9HC58 644 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 BABAM1Q9NWV8 329 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 LIMD1Q9UGP4 676 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 SALL2Q9Y467 1007 aaPredicted RBP2.81□□□□□ -1.96
NEDD1-204ENST00000457368 RPTORQ8N122 1335 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 NUP98P52948 1817 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 USP17L3A6NCW0 530 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 USP17L4A6NCW7 530 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 WNT10BO00744 389 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 TIMP2P16035 220 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 GPTP24298 496 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 DACT2Q5SW24 774 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 STRIP1Q5VSL9 837 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 USP17L1Q7RTZ2 530 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 SVOPQ8N4V2 548 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 PTPN18Q99952 460 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 ZC3H12CQ9C0D7 883 aaKnown RBP2.81□□□□□ -1.96
NEDD1-204ENST00000457368 ZFYVE28Q9HCC9 887 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 KCNQ5Q9NR82 932 aa2.81□□□□□ -1.96
NEDD1-204ENST00000457368 MED23Q9ULK4 1368 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 RHOQP17081 205 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 GJA5P36382 358 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 DEFB123Q8N688 67 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 LRRN4Q8WUT4 740 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 DPF3Q92784 378 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 ISCA1Q9BUE6 129 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 ZMYND15Q9H091 742 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 SRRDQ9UH36 339 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 NSFL1CQ9UNZ2 370 aaKnown RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 KNSTRNQ9Y448 316 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 ADGRA2Q96PE1 1338 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 POLR2AP24928 1970 aaKnown RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 SCN9AQ15858 1988 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 WTIPA6NIX2 430 aaPredicted RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 TCERG1O14776 1098 aaKnown RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 PPP1R12BO60237 982 aaPredicted RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 TLR2O60603 784 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 FARP2O94887 1054 aaPredicted RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 HSP90B1P14625 803 aaKnown RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 ATP2B4P23634 1241 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 RPS8P62241 208 aaKnown RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 FKBP1AP62942 108 aaKnown RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 LACTBP83111 547 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms