RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 AKNAD1Q5T1N1 836 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 AOPEPQ8N6M6 819 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 NKX2-3Q8TAU0 364 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 SEC31BQ9NQW1 1179 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 EP400Q96L91 3159 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 PNPLA7Q6ZV29 1317 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 COL5A3P25940 1745 aaPredicted RBP23.26■■□□□ 1.31
CSPG5-203ENST00000456150 CCDC69A6NI79 296 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 IFIT3O14879 490 aaKnown RBP23.26■■□□□ 1.31
CSPG5-203ENST00000456150 ZNF202O95125 648 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 ARMT1Q9H993 441 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 SLC12A7Q9Y666 1083 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 BCORQ6W2J9 1755 aa23.26■■□□□ 1.31
CSPG5-203ENST00000456150 NID2Q14112 1375 aa23.25■■□□□ 1.31
CSPG5-203ENST00000456150 PPP6R2O75170 966 aa23.25■■□□□ 1.31
CSPG5-203ENST00000456150 SLC3A2P08195 630 aaKnown RBP23.25■■□□□ 1.31
CSPG5-203ENST00000456150 RXRAP19793 462 aa23.25■■□□□ 1.31
CSPG5-203ENST00000456150 NTRK3Q16288 839 aa23.25■■□□□ 1.31
CSPG5-203ENST00000456150 AIFM3Q96NN9 605 aa23.25■■□□□ 1.31
CSPG5-203ENST00000456150 SENP2Q9HC62 589 aa23.25■■□□□ 1.31
CSPG5-203ENST00000456150 GSG1L2A8MUP6 293 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 PFKFB1P16118 471 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 RBM6P78332 1123 aaKnown RBP23.24■■□□□ 1.31
CSPG5-203ENST00000456150 CTDSPL2Q05D32 466 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 ZNF772Q68DY9 489 aaPredicted RBP23.24■■□□□ 1.31
CSPG5-203ENST00000456150 MFSD6Q6ZSS7 791 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 CACTINQ8WUQ7 758 aaKnown RBP23.24■■□□□ 1.31
CSPG5-203ENST00000456150 WASF1Q92558 559 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 PHKBQ93100 1093 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 TIGD1Q96MW7 591 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 ZSWIM5Q9P217 1185 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 CCDC144BQ3MJ40 725 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 CCDC144CPQ8IYA2 1237 aa23.24■■□□□ 1.31
CSPG5-203ENST00000456150 NTSR2O95665 410 aa23.23■■□□□ 1.31
CSPG5-203ENST00000456150 U2AF2P26368 475 aaKnown RBP eCLIP23.23■■□□□ 1.31
CSPG5-203ENST00000456150 TDO2P48775 406 aa23.23■■□□□ 1.31
CSPG5-203ENST00000456150 SSRP1Q08945 709 aaKnown RBP23.23■■□□□ 1.31
CSPG5-203ENST00000456150 SART3Q15020 963 aaKnown RBP23.23■■□□□ 1.31
CSPG5-203ENST00000456150 KRT27Q7Z3Y8 459 aa23.23■■□□□ 1.31
CSPG5-203ENST00000456150 STAG1Q8WVM7 1258 aa23.23■■□□□ 1.31
CSPG5-203ENST00000456150 ERCC4Q92889 916 aaPredicted RBP23.23■■□□□ 1.31
CSPG5-203ENST00000456150 MTA3Q9BTC8 594 aa23.23■■□□□ 1.31
CSPG5-203ENST00000456150 NIP7Q9Y221 180 aaKnown RBP eCLIP23.23■■□□□ 1.31
CSPG5-203ENST00000456150 ZNF831Q5JPB2 1677 aa23.23■■□□□ 1.31
CSPG5-203ENST00000456150 NLRP12P59046 1061 aa23.23■■□□□ 1.31
CSPG5-203ENST00000456150 LRRC8AQ8IWT6 810 aa23.23■■□□□ 1.31
CSPG5-203ENST00000456150 FAM217BQ9NTX9 383 aaPredicted RBP23.23■■□□□ 1.31
CSPG5-203ENST00000456150 A0A087WWV3 80 aa23.22■■□□□ 1.31
CSPG5-203ENST00000456150 SNAP23O00161 211 aa23.22■■□□□ 1.31
CSPG5-203ENST00000456150 RANBP6O60518 1105 aaKnown RBP23.22■■□□□ 1.31
CSPG5-203ENST00000456150 BCAMP50895 628 aa23.22■■□□□ 1.31
CSPG5-203ENST00000456150 SLC4A4Q9Y6R1 1079 aa23.22■■□□□ 1.31
CSPG5-203ENST00000456150 WDHD1O75717 1129 aaPredicted RBP23.21■■□□□ 1.31
CSPG5-203ENST00000456150 FMNL1O95466 1100 aaPredicted RBP23.21■■□□□ 1.31
CSPG5-203ENST00000456150 TPM4P67936 248 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 SMIM5Q71RC9 77 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 ZNF652Q9Y2D9 606 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 IFNAR1P17181 557 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 MARCKSP29966 332 aaPredicted RBP23.21■■□□□ 1.31
CSPG5-203ENST00000456150 DPCR1Q3MIW9 517 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 LCORLQ8N3X6 602 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 CDC5LQ99459 802 aaKnown RBP23.21■■□□□ 1.31
CSPG5-203ENST00000456150 SLC26A6Q9BXS9 759 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 RNF41Q9H4P4 317 aaPredicted RBP23.21■■□□□ 1.31
CSPG5-203ENST00000456150 LRP2BPQ9P2M1 347 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 MROH7-TTC4A0A0A0MT08 1334 aa23.21■■□□□ 1.31
CSPG5-203ENST00000456150 ERICH2A1L162 156 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 SYKP43405 635 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 CHRNDQ07001 517 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 PTPAQ15257 358 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 TMTC2Q8N394 836 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 FBXW7Q969H0 707 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 MYL10Q9BUA6 226 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 INCENPQ9NQS7 918 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 UBE2Q2Q8WVN8 375 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 MAP3K14Q99558 947 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.2■■□□□ 1.3
CSPG5-203ENST00000456150 HPSEQ9Y251 543 aa23.2■■□□□ 1.3
CSPG5-203ENST00000456150 FAM237AA0A1B0GTK4 181 aa23.19■■□□□ 1.3
CSPG5-203ENST00000456150 SMTNL1A8MU46 457 aa23.19■■□□□ 1.3
CSPG5-203ENST00000456150 RCAN1P53805 252 aa23.19■■□□□ 1.3
CSPG5-203ENST00000456150 GSDMDP57764 484 aa23.19■■□□□ 1.3
CSPG5-203ENST00000456150 WTAPQ15007 396 aa23.19■■□□□ 1.3
CSPG5-203ENST00000456150 TRIM22Q8IYM9 498 aa23.19■■□□□ 1.3
CSPG5-203ENST00000456150 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.19■■□□□ 1.3
CSPG5-203ENST00000456150 CCNL1Q9UK58 526 aaPredicted RBP23.19■■□□□ 1.3
CSPG5-203ENST00000456150 PRKAB2O43741 272 aa23.18■■□□□ 1.3
CSPG5-203ENST00000456150 BCL11BQ9C0K0 894 aaPredicted RBP23.18■■□□□ 1.3
CSPG5-203ENST00000456150 TOMM22Q9NS69 142 aa23.18■■□□□ 1.3
CSPG5-203ENST00000456150 IMPACTQ9P2X3 320 aa23.18■■□□□ 1.3
CSPG5-203ENST00000456150 TACC3Q9Y6A5 838 aa23.18■■□□□ 1.3
CSPG5-203ENST00000456150 CCDC196A0A1B0GTZ2 297 aa23.18■■□□□ 1.3
CSPG5-203ENST00000456150 CUTAO60888 179 aa23.18■■□□□ 1.3
CSPG5-203ENST00000456150 SAFBQ15424 915 aaKnown RBP eCLIP23.18■■□□□ 1.3
CSPG5-203ENST00000456150 RTN1Q16799 776 aa23.18■■□□□ 1.3
CSPG5-203ENST00000456150 RRP12Q5JTH9 1297 aaKnown RBP23.18■■□□□ 1.3
CSPG5-203ENST00000456150 LY75O60449 1722 aa23.17■■□□□ 1.3
CSPG5-203ENST00000456150 RIOK3O14730 519 aaKnown RBP23.17■■□□□ 1.3
CSPG5-203ENST00000456150 RESP18Q5W5W9 173 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms