RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 ATG3Q9NT62 314 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 MAN1B1Q9UKM7 699 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 ZMYM6O95789 1325 aa15.67■□□□□ 0.1
PTPRE-204ENST00000455661 RPS6KA5O75582 802 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 BMP6P22004 513 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 AFDNP55196 1824 aaKnown RBP15.66■□□□□ 0.1
PTPRE-204ENST00000455661 TRDNQ13061 729 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 PPFIBP1Q86W92 1011 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 KRI1Q8N9T8 703 aaKnown RBP15.66■□□□□ 0.1
PTPRE-204ENST00000455661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPRE-204ENST00000455661 TUBBP07437 444 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPRE-204ENST00000455661 ANTXR2P58335 489 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 FKBP4Q02790 459 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPRE-204ENST00000455661 POSTNQ15063 836 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 KIF4BQ2VIQ3 1234 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 ARHGEF25Q86VW2 580 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 MKRN1Q9UHC7 482 aaKnown RBP15.66■□□□□ 0.1
PTPRE-204ENST00000455661 L1RE1Q9UN81 338 aa15.66■□□□□ 0.1
PTPRE-204ENST00000455661 CTAGE9A4FU28 777 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 SOWAHDA6NJG2 315 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 KCNA6P17658 529 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 CASP7P55210 303 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 MDM2Q00987 491 aaPredicted RBP15.65■□□□□ 0.1
PTPRE-204ENST00000455661 NR1I3Q14994 352 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 CYB5RLQ6IPT4 315 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 AIFM3Q96NN9 605 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 IRX2Q9BZI1 471 aaPredicted RBP15.65■□□□□ 0.1
PTPRE-204ENST00000455661 TAOK2Q9UL54 1235 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 ADGRG1Q9Y653 693 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 SPEF2Q9C093 1822 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 A0A1B0GUL7 405 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 SNRPA1P09661 255 aaKnown RBP15.65■□□□□ 0.1
PTPRE-204ENST00000455661 NOP2P46087 812 aaKnown RBP15.65■□□□□ 0.1
PTPRE-204ENST00000455661 MTF1Q14872 753 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 ZNF569Q5MCW4 686 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 TRIML1Q8N9V2 468 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 ABCB6Q9NP58 842 aa15.65■□□□□ 0.1
PTPRE-204ENST00000455661 CPDO75976 1380 aa15.64■□□□□ 0.09
PTPRE-204ENST00000455661 PLEKHG2Q9H7P9 1386 aa15.64■□□□□ 0.09
PTPRE-204ENST00000455661 PHRF1Q9P1Y6 1649 aaKnown RBP15.64■□□□□ 0.09
PTPRE-204ENST00000455661 FOXO4P98177 505 aa15.64■□□□□ 0.09
PTPRE-204ENST00000455661 FMR1Q06787 632 aaKnown RBP eCLIP15.64■□□□□ 0.09
PTPRE-204ENST00000455661 FAM71BQ8TC56 605 aa15.64■□□□□ 0.09
PTPRE-204ENST00000455661 CCDC102AQ96A19 550 aa15.64■□□□□ 0.09
PTPRE-204ENST00000455661 ANGEL1Q9UNK9 670 aaKnown RBP15.64■□□□□ 0.09
PTPRE-204ENST00000455661 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
PTPRE-204ENST00000455661 C5P01031 1676 aa15.64■□□□□ 0.09
PTPRE-204ENST00000455661 MAP3K15Q6ZN16 1313 aa15.64■□□□□ 0.09
PTPRE-204ENST00000455661 FOXN1O15353 648 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 PIP4K2BP78356 416 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 NT5DC1Q5TFE4 455 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 TTC5Q8N0Z6 440 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 PLBD2Q8NHP8 589 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 PNKPQ96T60 521 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.63■□□□□ 0.09
PTPRE-204ENST00000455661 SLIT3O75094 1523 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 A0A1B0GTH6 734 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 EYA2O00167 538 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 MAGEA9P43362 315 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 MORC3Q14149 939 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 KANK3Q6NY19 840 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 LRP10Q7Z4F1 713 aa15.63■□□□□ 0.09
PTPRE-204ENST00000455661 TRMT44Q8IYL2 757 aaKnown RBP15.63■□□□□ 0.09
PTPRE-204ENST00000455661 ZNF496Q96IT1 587 aaPredicted RBP15.63■□□□□ 0.09
PTPRE-204ENST00000455661 LMTK3Q96Q04 1460 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 CTAGE15A4D2H0 777 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 CTAGE8P0CG41 777 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 ERCC5P28715 1186 aaPredicted RBP15.62■□□□□ 0.09
PTPRE-204ENST00000455661 IARSP41252 1262 aaKnown RBP15.62■□□□□ 0.09
PTPRE-204ENST00000455661 PIP4K2AP48426 406 aaPredicted RBP15.62■□□□□ 0.09
PTPRE-204ENST00000455661 IRX3P78415 501 aaPredicted RBP15.62■□□□□ 0.09
PTPRE-204ENST00000455661 CTAGE6Q86UF2 777 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 CTAGE4Q8IX94 777 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 APPBP2Q92624 585 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 SAMSN1Q9NSI8 373 aaKnown RBP15.62■□□□□ 0.09
PTPRE-204ENST00000455661 C4AP0C0L4 1744 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 C4BP0C0L5 1744 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 ARHGAP23Q9P227 1491 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 H7C1W4 665 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 FOXP2O15409 715 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 GCP02774 474 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 RHOXF2BP0C7M4 288 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 SARSP49591 514 aaKnown RBP15.62■□□□□ 0.09
PTPRE-204ENST00000455661 PLCD1P51178 756 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 CASP8Q14790 479 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 WHAMMP3Q1A5X7 153 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 RAD9BQ6WBX8 426 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 IGSF22Q8N9C0 903 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 ZFP91Q96JP5 570 aaPredicted RBP15.62■□□□□ 0.09
PTPRE-204ENST00000455661 RHOXF2Q9BQY4 288 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 MED4Q9NPJ6 270 aa15.62■□□□□ 0.09
PTPRE-204ENST00000455661 TTF2Q9UNY4 1162 aaKnown RBP15.62■□□□□ 0.09
PTPRE-204ENST00000455661 NWD2Q9ULI1 1742 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 POLR2DO15514 142 aaKnown RBP15.61■□□□□ 0.09
PTPRE-204ENST00000455661 N4BP1O75113 896 aaKnown RBP15.61■□□□□ 0.09
PTPRE-204ENST00000455661 RBL2Q08999 1139 aa15.61■□□□□ 0.09
PTPRE-204ENST00000455661 TTC31Q49AM3 519 aaPredicted RBP15.61■□□□□ 0.09
PTPRE-204ENST00000455661 SPECC1Q5M775 1068 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms