RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 AATKQ6ZMQ8 1374 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 PRMT3O60678 531 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 GCP02774 474 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 NRG1Q02297 640 aaPredicted RBP5.45□□□□□ -1.54
RBM39-220ENST00000455343 DDB1Q16531 1140 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 OCLNQ16625 522 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 COX20Q5RI15 118 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 NUTM2GQ5VZR2 741 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 ELMSAN1Q6PJG2 1045 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 DTWD1Q8N5C7 304 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 MARCH10Q8NA82 808 aaPredicted RBP5.45□□□□□ -1.54
RBM39-220ENST00000455343 STK32AQ8WU08 396 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 NRKQ7Z2Y5 1582 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 CRYBG1Q9Y4K1 1723 aa5.45□□□□□ -1.54
RBM39-220ENST00000455343 COL5A2P05997 1499 aaPredicted RBP5.45□□□□□ -1.54
RBM39-220ENST00000455343 XYLBO75191 536 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 ARID4AP29374 1257 aaPredicted RBP5.44□□□□□ -1.54
RBM39-220ENST00000455343 CRB1P82279 1406 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 FOXD4L6Q3SYB3 417 aaPredicted RBP5.44□□□□□ -1.54
RBM39-220ENST00000455343 FOXD4L3Q6VB84 417 aaPredicted RBP5.44□□□□□ -1.54
RBM39-220ENST00000455343 WFDC8Q8IUA0 241 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 RGL4Q8IZJ4 473 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 ABTB2Q8N961 1025 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 SMG9Q9H0W8 520 aaKnown RBP5.44□□□□□ -1.54
RBM39-220ENST00000455343 STK32BQ9NY57 414 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 TLR7Q9NYK1 1049 aaKnown RBP5.44□□□□□ -1.54
RBM39-220ENST00000455343 KCNMB2Q9Y691 235 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 RGPD8O14715 1765 aaPredicted RBP5.44□□□□□ -1.54
RBM39-220ENST00000455343 CASZ1Q86V15 1759 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 ACEP12821 1306 aa5.44□□□□□ -1.54
RBM39-220ENST00000455343 IFT172Q9UG01 1749 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 H2AFB1P0C5Y9 115 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 H2AFB2P0C5Z0 115 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 HOXD8P13378 290 aaPredicted RBP5.43□□□□□ -1.54
RBM39-220ENST00000455343 EIF2AK2P19525 551 aaKnown RBP5.43□□□□□ -1.54
RBM39-220ENST00000455343 SRPK2P78362 688 aaKnown RBP5.43□□□□□ -1.54
RBM39-220ENST00000455343 C16orf46Q6P387 395 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 HFE2Q6ZVN8 426 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 NLRP13Q86W25 1043 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 FBXO11Q86XK2 927 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 ETFBKMTQ8IXQ9 262 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 CMTR1Q8N1G2 835 aaKnown RBP5.43□□□□□ -1.54
RBM39-220ENST00000455343 COL26A1Q96A83 441 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 SSBP4Q9BWG4 385 aaPredicted RBP5.43□□□□□ -1.54
RBM39-220ENST00000455343 CDK19Q9BWU1 502 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 SAP130Q9H0E3 1048 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 LMO7Q8WWI1 1683 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 PEAK1Q9H792 1746 aa5.43□□□□□ -1.54
RBM39-220ENST00000455343 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.42□□□□□ -1.54
RBM39-220ENST00000455343 TNFRSF10BO14763 440 aa5.42□□□□□ -1.54
RBM39-220ENST00000455343 SOX18P35713 384 aa5.42□□□□□ -1.54
RBM39-220ENST00000455343 TRIP4Q15650 581 aaPredicted RBP5.42□□□□□ -1.54
RBM39-220ENST00000455343 PRSS36Q5K4E3 855 aa5.42□□□□□ -1.54
RBM39-220ENST00000455343 CXXC1Q9P0U4 656 aaPredicted RBP5.42□□□□□ -1.54
RBM39-220ENST00000455343 WDR17Q8IZU2 1322 aa5.42□□□□□ -1.54
RBM39-220ENST00000455343 BRD4O60885 1362 aaPredicted RBP5.42□□□□□ -1.54
RBM39-220ENST00000455343 MMP20O60882 483 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 DEAF1O75398 565 aaPredicted RBP5.41□□□□□ -1.54
RBM39-220ENST00000455343 ATG7O95352 703 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 PSAPP07602 524 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 BRD2P25440 801 aaKnown RBP5.41□□□□□ -1.54
RBM39-220ENST00000455343 GPR162Q16538 588 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 FAM26DQ5JW98 314 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 TMEM164Q5U3C3 297 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 TOM1L2Q6ZVM7 507 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 TP53INP1Q96A56 240 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 PLD4Q96BZ4 506 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 NSUN5Q96P11 429 aaKnown RBP5.41□□□□□ -1.54
RBM39-220ENST00000455343 MKNK1Q9BUB5 465 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 RGPD3A6NKT7 1758 aaPredicted RBP5.41□□□□□ -1.54
RBM39-220ENST00000455343 RGPD4Q7Z3J3 1758 aa5.41□□□□□ -1.54
RBM39-220ENST00000455343 MYOM1P52179 1685 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 PARP4Q9UKK3 1724 aaKnown RBP5.4□□□□□ -1.54
RBM39-220ENST00000455343 LOC102724428A0A0B4J2F2 783 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 SCO2A0A1W2PP80 73 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 J3QW42 95 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 EXOC5O00471 708 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 SIK1P57059 783 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 ZNF827Q17R98 1081 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 CAPN12Q6ZSI9 719 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 ARHGEF25Q86VW2 580 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 WFDC12Q8WWY7 111 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 CLP1Q92989 425 aaKnown RBP5.4□□□□□ -1.54
RBM39-220ENST00000455343 CARD10Q9BWT7 1032 aa5.4□□□□□ -1.54
RBM39-220ENST00000455343 PHRF1Q9P1Y6 1649 aaKnown RBP5.4□□□□□ -1.55
RBM39-220ENST00000455343 DLL1O00548 723 aa5.39□□□□□ -1.55
RBM39-220ENST00000455343 PTCD1O75127 700 aaKnown RBP5.39□□□□□ -1.55
RBM39-220ENST00000455343 GHRHP01286 108 aa5.39□□□□□ -1.55
RBM39-220ENST00000455343 NOS3P29474 1203 aa5.39□□□□□ -1.55
RBM39-220ENST00000455343 IGF2-ASQ6U949 168 aa5.39□□□□□ -1.55
RBM39-220ENST00000455343 DCAF11Q8TEB1 546 aa5.39□□□□□ -1.55
RBM39-220ENST00000455343 SLIT3O75094 1523 aa5.38□□□□□ -1.55
RBM39-220ENST00000455343 LRRC37A3O60309 1634 aa5.38□□□□□ -1.55
RBM39-220ENST00000455343 GRIN3BO60391 1043 aa5.38□□□□□ -1.55
RBM39-220ENST00000455343 YBX3P16989 372 aaKnown RBP eCLIP5.38□□□□□ -1.55
RBM39-220ENST00000455343 HSPA6P17066 643 aa5.38□□□□□ -1.55
RBM39-220ENST00000455343 IREB2P48200 963 aaKnown RBP5.38□□□□□ -1.55
RBM39-220ENST00000455343 NLGN2Q8NFZ4 835 aa5.38□□□□□ -1.55
RBM39-220ENST00000455343 PIK3R5Q8WYR1 880 aa5.38□□□□□ -1.55
RBM39-220ENST00000455343 MEGF10Q96KG7 1140 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms