RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.9□□□□□ -1.3
PCGEM1-201ENST00000454040 E9PCH4 1651 aa6.9□□□□□ -1.3
PCGEM1-201ENST00000454040 EIF2AK4Q9P2K8 1649 aaKnown RBP6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 GPR182O15218 404 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 MPSTP25325 297 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 HNRNPMP52272 730 aaKnown RBP eCLIP6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 MAP9Q49MG5 647 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 WDR78Q5VTH9 848 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 USP48Q86UV5 1035 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 DTWD1Q8N5C7 304 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 SLC30A3Q99726 388 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 KANSL2Q9H9L4 492 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 GNL3LQ9NVN8 582 aaKnown RBP6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 PRKAB1Q9Y478 270 aa6.9□□□□□ -1.31
PCGEM1-201ENST00000454040 MAGI2Q86UL8 1455 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 DHX29Q7Z478 1369 aaKnown RBP6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 ARHGAP5Q13017 1502 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 TNFRSF10BO14763 440 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 NDUFB5O43674 189 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 FAM13AO94988 1023 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 WNT11O96014 354 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 TGFB1P01137 390 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 WEE1P30291 646 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 GRIK1P39086 918 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 MYBPC2Q14324 1141 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 VPS37DQ86XT2 251 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 DMRTC2Q8IXT2 367 aaPredicted RBP6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 JPH1Q9HDC5 661 aaPredicted RBP6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 CCDC87Q9NVE4 849 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 NOD1Q9Y239 953 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 ERBINQ96RT1 1412 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 TTC37Q6PGP7 1564 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 WASHC2CQ9Y4E1 1318 aa6.89□□□□□ -1.31
PCGEM1-201ENST00000454040 CLASP1Q7Z460 1538 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 PPP1R12AO14974 1030 aaPredicted RBP6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 PLCH2O75038 1416 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 LIG1P18858 919 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 GJA8P48165 433 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 CCDC102BQ68D86 513 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 CKAP2LQ8IYA6 745 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 DZIP1LQ8IYY4 767 aaKnown RBP6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 TMC1Q8TDI8 760 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 MKL1Q969V6 931 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 C8orf48Q96LL4 319 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 C12orf49Q9H741 205 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 TYW1Q9NV66 732 aaKnown RBP6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 NAP1L2Q9ULW6 460 aaPredicted RBP6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 ZCCHC11Q5TAX3 1644 aaKnown RBP6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 SYCP2Q9BX26 1530 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 GPRASP1Q5JY77 1395 aa6.88□□□□□ -1.31
PCGEM1-201ENST00000454040 CCDC144AA2RUR9 1427 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 RTEL1-TNFRSF6BF6WH68 1400 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 KRTAP9-7A8MTY7 169 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 IGLV1-40P01703 118 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 GTF2IP78347 998 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 ENOX2Q16206 610 aaKnown RBP6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 MAP7D1Q3KQU3 841 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 IGF2-ASQ6U949 168 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 BICDL1Q6ZP65 573 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 IPO4Q8TEX9 1081 aaKnown RBP6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 SLC39A13Q96H72 371 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 INSRP06213 1382 aa6.87□□□□□ -1.31
PCGEM1-201ENST00000454040 CCDC189A1A4V9 331 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 EXOC5O00471 708 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 FZD6O60353 706 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 AFF1P51825 1210 aaKnown RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 PTPN12Q05209 780 aaKnown RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 UBE4AQ14139 1066 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 EFCAB2Q5VUJ9 269 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 NBPF6Q5VWK0 638 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 RINLQ6ZS11 566 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 DTX1Q86Y01 620 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 TSR2Q969E8 191 aaKnown RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 CRELD1Q96HD1 420 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 NBPF4Q96M43 638 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 FRMD6Q96NE9 622 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 FAM129BQ96TA1 746 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 HINFPQ9BQA5 517 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 CARD11Q9BXL7 1154 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 GEMIN8Q9NWZ8 242 aaKnown RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 PPP4R2Q9NY27 417 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 EID1Q9Y6B2 187 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 ZMYM4Q5VZL5 1548 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 NEURL4Q96JN8 1562 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 BRD4O60885 1362 aaPredicted RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 SMG6Q86US8 1419 aaKnown RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 PRAG1Q86YV5 1406 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 FAM221BA6H8Z2 402 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 WDHD1O75717 1129 aaPredicted RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 CALRP27797 417 aaKnown RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 SPEM2Q0P670 501 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 PAK2Q13177 524 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 GLIPR1L2Q4G1C9 344 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 PNISRQ8TF01 805 aaKnown RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 SRPK1Q96SB4 655 aaKnown RBP6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 FANCLQ9NW38 375 aa6.86□□□□□ -1.31
PCGEM1-201ENST00000454040 KCNG1Q9UIX4 513 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms