RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 PDHBP11177 359 aa21.16■□□□□ 0.98
PTPA-223ENST00000452489 CCDC8Q9H0W5 538 aaPredicted RBP21.16■□□□□ 0.98
PTPA-223ENST00000452489 TLR7Q9NYK1 1049 aaKnown RBP21.16■□□□□ 0.98
PTPA-223ENST00000452489 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.16■□□□□ 0.98
PTPA-223ENST00000452489 ATXN2Q99700 1313 aaKnown RBP21.16■□□□□ 0.98
PTPA-223ENST00000452489 SALL1Q9NSC2 1324 aa21.16■□□□□ 0.98
PTPA-223ENST00000452489 SYKP43405 635 aa21.16■□□□□ 0.98
PTPA-223ENST00000452489 AMPD2Q01433 879 aa21.16■□□□□ 0.98
PTPA-223ENST00000452489 PDCLQ13371 301 aa21.16■□□□□ 0.98
PTPA-223ENST00000452489 B4GALNT4Q76KP1 1039 aa21.16■□□□□ 0.98
PTPA-223ENST00000452489 TRMT44Q8IYL2 757 aaKnown RBP21.16■□□□□ 0.98
PTPA-223ENST00000452489 EDC3Q96F86 508 aaKnown RBP21.16■□□□□ 0.98
PTPA-223ENST00000452489 FAM208AQ9UK61 1670 aaKnown RBP21.16■□□□□ 0.98
PTPA-223ENST00000452489 CARMIL3Q8ND23 1372 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 YEATS4O95619 227 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 CYP21A2P08686 494 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 CMA1P23946 247 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 CCDC40Q4G0X9 1142 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 FOXP4Q8IVH2 680 aaPredicted RBP21.15■□□□□ 0.98
PTPA-223ENST00000452489 ZNF483Q8TF39 744 aaPredicted RBP21.15■□□□□ 0.98
PTPA-223ENST00000452489 SH3GL2Q99962 352 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 HINFPQ9BQA5 517 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 NBPF3Q9H094 633 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 POLR3EQ9NVU0 708 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 JCADQ9P266 1359 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 RASSF9O75901 435 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 CHGBP05060 677 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 GRIK3Q13003 919 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 MTHFSDQ2M296 383 aaKnown RBP21.15■□□□□ 0.98
PTPA-223ENST00000452489 USPL1Q5W0Q7 1092 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 PANX2Q96RD6 677 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 POLD4Q9HCU8 107 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 NFE2L3Q9Y4A8 694 aa21.15■□□□□ 0.98
PTPA-223ENST00000452489 TMCO5BA8MYB1 307 aa21.14■□□□□ 0.98
PTPA-223ENST00000452489 FMR1Q06787 632 aaKnown RBP eCLIP21.14■□□□□ 0.98
PTPA-223ENST00000452489 RBL2Q08999 1139 aa21.14■□□□□ 0.98
PTPA-223ENST00000452489 STOX1Q6ZVD7 989 aa21.14■□□□□ 0.98
PTPA-223ENST00000452489 RASGRP2Q7LDG7 609 aa21.14■□□□□ 0.98
PTPA-223ENST00000452489 GJB4Q9NTQ9 266 aa21.14■□□□□ 0.98
PTPA-223ENST00000452489 MYO1BO43795 1136 aa21.14■□□□□ 0.97
PTPA-223ENST00000452489 FDPSP14324 419 aaKnown RBP21.14■□□□□ 0.97
PTPA-223ENST00000452489 SMTNP53814 917 aa21.14■□□□□ 0.97
PTPA-223ENST00000452489 RNF187Q5TA31 235 aaPredicted RBP21.14■□□□□ 0.97
PTPA-223ENST00000452489 CCDC129Q6ZRS4 1044 aa21.14■□□□□ 0.97
PTPA-223ENST00000452489 PXDNLA1KZ92 1463 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 CCDC13Q8IYE1 715 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 MMS19Q96T76 1030 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 VCPKMTQ9H867 229 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 SLC40A1Q9NP59 571 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 HDAC6Q9UBN7 1215 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 TEX33O43247 280 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 ARHGAP25P42331 645 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 AMPHP49418 695 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 METTL16Q86W50 562 aaKnown RBP21.13■□□□□ 0.97
PTPA-223ENST00000452489 FAM228AQ86W67 206 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 ANKRD18AQ8IVF6 992 aa21.13■□□□□ 0.97
PTPA-223ENST00000452489 SSBP05455 408 aaKnown RBP eCLIP21.12■□□□□ 0.97
PTPA-223ENST00000452489 ZNF18P17022 549 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 E2F5Q15329 346 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 LONRF3Q496Y0 759 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 MYSM1Q5VVJ2 828 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 GGT6Q6P531 493 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 EAF2Q96CJ1 260 aaPredicted RBP21.12■□□□□ 0.97
PTPA-223ENST00000452489 PCDHA5Q9Y5H7 936 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 ITSN1Q15811 1721 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 A0A1B0GUA9 196 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 NAA25Q14CX7 972 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 POGZQ7Z3K3 1410 aa21.12■□□□□ 0.97
PTPA-223ENST00000452489 SAMSN1Q9NSI8 373 aaKnown RBP21.12■□□□□ 0.97
PTPA-223ENST00000452489 ENC1O14682 589 aa21.11■□□□□ 0.97
PTPA-223ENST00000452489 FOXN1O15353 648 aa21.11■□□□□ 0.97
PTPA-223ENST00000452489 SRGAP2O75044 1071 aa21.11■□□□□ 0.97
PTPA-223ENST00000452489 PDE6BP35913 854 aa21.11■□□□□ 0.97
PTPA-223ENST00000452489 TATDN2Q93075 761 aa21.11■□□□□ 0.97
PTPA-223ENST00000452489 EDC4Q6P2E9 1401 aaKnown RBP21.1■□□□□ 0.97
PTPA-223ENST00000452489 KIF28PB7ZC32 967 aa21.1■□□□□ 0.97
PTPA-223ENST00000452489 RPSAP08865 295 aaKnown RBP21.1■□□□□ 0.97
PTPA-223ENST00000452489 NR1I3Q14994 352 aa21.1■□□□□ 0.97
PTPA-223ENST00000452489 ANO1Q5XXA6 986 aa21.1■□□□□ 0.97
PTPA-223ENST00000452489 RRP36Q96EU6 259 aaKnown RBP21.1■□□□□ 0.97
PTPA-223ENST00000452489 ZEB2O60315 1214 aa21.1■□□□□ 0.97
PTPA-223ENST00000452489 ATP1A2P50993 1020 aa21.1■□□□□ 0.97
PTPA-223ENST00000452489 SF3B2Q13435 895 aaKnown RBP21.1■□□□□ 0.97
PTPA-223ENST00000452489 TAF7Q15545 349 aaPredicted RBP21.1■□□□□ 0.97
PTPA-223ENST00000452489 TLDC1Q6P9B6 456 aa21.1■□□□□ 0.97
PTPA-223ENST00000452489 SHC4Q6S5L8 630 aa21.1■□□□□ 0.97
PTPA-223ENST00000452489 MCM3P25205 808 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 GCKP35557 465 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 NAP1L1P55209 391 aaKnown RBP21.09■□□□□ 0.97
PTPA-223ENST00000452489 ZKSCAN8Q15776 578 aaPredicted RBP21.09■□□□□ 0.97
PTPA-223ENST00000452489 SNCBQ16143 134 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 ZNF827Q17R98 1081 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 CNKSR2Q8WXI2 1034 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 ARL8AQ96BM9 186 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 CAPZA3Q96KX2 299 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 SCLT1Q96NL6 688 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 KIF9Q9HAQ2 790 aa21.09■□□□□ 0.97
PTPA-223ENST00000452489 HOOK1Q9UJC3 728 aaKnown RBP21.09■□□□□ 0.97
PTPA-223ENST00000452489 N4BP2Q86UW6 1770 aaPredicted RBP21.09■□□□□ 0.97
PTPA-223ENST00000452489 PPP1R12BO60237 982 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms