RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 NEUROD6Q96NK8 337 aa19.23■□□□□ 0.67
TRA2A-203ENST00000448549 DDX4Q9NQI0 724 aaKnown RBP19.23■□□□□ 0.67
TRA2A-203ENST00000448549 PICK1Q9NRD5 415 aa19.23■□□□□ 0.67
TRA2A-203ENST00000448549 CENPFP49454 3210 aa19.23■□□□□ 0.67
TRA2A-203ENST00000448549 ADGRA2Q96PE1 1338 aa19.23■□□□□ 0.67
TRA2A-203ENST00000448549 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
TRA2A-203ENST00000448549 CYP2C8P10632 490 aa19.22■□□□□ 0.67
TRA2A-203ENST00000448549 MECOMQ03112 1051 aa19.22■□□□□ 0.67
TRA2A-203ENST00000448549 PICALMQ13492 652 aa19.22■□□□□ 0.67
TRA2A-203ENST00000448549 SRRDQ9UH36 339 aa19.22■□□□□ 0.67
TRA2A-203ENST00000448549 RFX7Q2KHR2 1363 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 TRIM27P14373 513 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 PTPRAP18433 802 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 OSBPP22059 807 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 MAP3K10Q02779 954 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 ERICH6Q7L0X2 663 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 PARK7Q99497 189 aaKnown RBP19.21■□□□□ 0.67
TRA2A-203ENST00000448549 HMG20BQ9P0W2 317 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 TNNQ9UQP3 1299 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 MROH7-TTC4A0A0A0MT08 1334 aa19.21■□□□□ 0.67
TRA2A-203ENST00000448549 MKI67P46013 3256 aaKnown RBP19.2■□□□□ 0.66
TRA2A-203ENST00000448549 IPO8O15397 1037 aaKnown RBP19.2■□□□□ 0.66
TRA2A-203ENST00000448549 HOXD10P28358 340 aa19.2■□□□□ 0.66
TRA2A-203ENST00000448549 GORABQ5T7V8 394 aa19.2■□□□□ 0.66
TRA2A-203ENST00000448549 PI16Q6UXB8 463 aa19.2■□□□□ 0.66
TRA2A-203ENST00000448549 ZNF384Q8TF68 577 aa19.2■□□□□ 0.66
TRA2A-203ENST00000448549 FRAT1Q92837 279 aaPredicted RBP19.2■□□□□ 0.66
TRA2A-203ENST00000448549 AFG3L2Q9Y4W6 797 aa19.2■□□□□ 0.66
TRA2A-203ENST00000448549 BRCA2P51587 3418 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 GPR75-ASB3A0A0A6YYF3 556 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 A0A0G2JLL6 359 aaPredicted RBP19.19■□□□□ 0.66
TRA2A-203ENST00000448549 BCAR3O75815 825 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 GNAI2P04899 355 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 BCRP11274 1271 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 RHBDL3P58872 404 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 MTFR1Q15390 333 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 HABP4Q5JVS0 413 aaKnown RBP19.19■□□□□ 0.66
TRA2A-203ENST00000448549 TBC1D9Q6ZT07 1266 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 FASTKD5Q7L8L6 764 aaKnown RBP19.19■□□□□ 0.66
TRA2A-203ENST00000448549 PRRT2Q7Z6L0 340 aaPredicted RBP19.19■□□□□ 0.66
TRA2A-203ENST00000448549 SPATA5Q8NB90 893 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 RAET1EQ8TD07 263 aa19.19■□□□□ 0.66
TRA2A-203ENST00000448549 PNMA6EA0A0J9YXQ4 647 aa19.18■□□□□ 0.66
TRA2A-203ENST00000448549 CTNND1O60716 968 aaKnown RBP19.18■□□□□ 0.66
TRA2A-203ENST00000448549 ATF7IPQ6VMQ6 1270 aa19.18■□□□□ 0.66
TRA2A-203ENST00000448549 GADL1Q6ZQY3 521 aa19.18■□□□□ 0.66
TRA2A-203ENST00000448549 CLUAP1Q96AJ1 413 aa19.18■□□□□ 0.66
TRA2A-203ENST00000448549 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.18■□□□□ 0.66
TRA2A-203ENST00000448549 MYPNQ86TC9 1320 aa19.18■□□□□ 0.66
TRA2A-203ENST00000448549 ZSWIM8A7E2V4 1837 aa19.18■□□□□ 0.66
TRA2A-203ENST00000448549 RBBP6Q7Z6E9 1792 aaKnown RBP19.17■□□□□ 0.66
TRA2A-203ENST00000448549 GRK4P32298 578 aa19.17■□□□□ 0.66
TRA2A-203ENST00000448549 G3BP1Q13283 466 aaKnown RBP eCLIP19.17■□□□□ 0.66
TRA2A-203ENST00000448549 CCDC84Q86UT8 332 aaPredicted RBP19.17■□□□□ 0.66
TRA2A-203ENST00000448549 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
TRA2A-203ENST00000448549 MYH13Q9UKX3 1938 aa19.17■□□□□ 0.66
TRA2A-203ENST00000448549 KIAA0100Q14667 2235 aaKnown RBP19.17■□□□□ 0.66
TRA2A-203ENST00000448549 TRIM75PA6NK02 468 aa19.16■□□□□ 0.66
TRA2A-203ENST00000448549 FCGRTP55899 365 aa19.16■□□□□ 0.66
TRA2A-203ENST00000448549 GSTO1P78417 241 aa19.16■□□□□ 0.66
TRA2A-203ENST00000448549 PRKCZQ05513 592 aa19.16■□□□□ 0.66
TRA2A-203ENST00000448549 RAI14Q9P0K7 980 aa19.16■□□□□ 0.66
TRA2A-203ENST00000448549 FAM196BA6NMK8 535 aa19.15■□□□□ 0.66
TRA2A-203ENST00000448549 TBC1D12O60347 775 aa19.15■□□□□ 0.66
TRA2A-203ENST00000448549 NPM3O75607 178 aaKnown RBP19.15■□□□□ 0.66
TRA2A-203ENST00000448549 LDHCP07864 332 aa19.15■□□□□ 0.66
TRA2A-203ENST00000448549 ARID4AP29374 1257 aaPredicted RBP19.15■□□□□ 0.66
TRA2A-203ENST00000448549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.15■□□□□ 0.667e-12■■■■■ 107.6
TRA2A-203ENST00000448549 BIN2Q9UBW5 565 aaPredicted RBP19.15■□□□□ 0.66
TRA2A-203ENST00000448549 SLC45A1Q9Y2W3 748 aa19.15■□□□□ 0.66
TRA2A-203ENST00000448549 MCAMP43121 646 aa19.14■□□□□ 0.65
TRA2A-203ENST00000448549 SHISA4Q96DD7 197 aa19.14■□□□□ 0.65
TRA2A-203ENST00000448549 GABRQQ9UN88 632 aa19.14■□□□□ 0.65
TRA2A-203ENST00000448549 MAP4K4O95819 1239 aaPredicted RBP19.13■□□□□ 0.65
TRA2A-203ENST00000448549 CCL5P13501 91 aa19.13■□□□□ 0.65
TRA2A-203ENST00000448549 TMEM57Q8N5G2 664 aa19.13■□□□□ 0.65
TRA2A-203ENST00000448549 SMCR8Q8TEV9 937 aaPredicted RBP19.13■□□□□ 0.65
TRA2A-203ENST00000448549 LRP2BPQ9P2M1 347 aa19.13■□□□□ 0.65
TRA2A-203ENST00000448549 UQCRFS1P1P0C7P4 283 aa19.12■□□□□ 0.65
TRA2A-203ENST00000448549 RNF208Q9H0X6 261 aa19.12■□□□□ 0.65
TRA2A-203ENST00000448549 OSBPL5Q9H0X9 879 aaPredicted RBP19.12■□□□□ 0.65
TRA2A-203ENST00000448549 SNRKQ9NRH2 765 aa19.12■□□□□ 0.65
TRA2A-203ENST00000448549 AGTPBP1Q9UPW5 1226 aa19.12■□□□□ 0.65
TRA2A-203ENST00000448549 H0YGN5 161 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 GJB1P08034 283 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 FLT3LGP49771 235 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 UBXN2AP68543 259 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 SPP2Q13103 211 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 TREML2Q5T2D2 321 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 TEX11Q8IYF3 940 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 NKX2-3Q8TAU0 364 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 SH3RF3Q8TEJ3 882 aaPredicted RBP19.11■□□□□ 0.65
TRA2A-203ENST00000448549 COLQQ9Y215 455 aaPredicted RBP19.11■□□□□ 0.65
TRA2A-203ENST00000448549 AK9Q5TCS8 1911 aa19.11■□□□□ 0.65
TRA2A-203ENST00000448549 MYH2Q9UKX2 1941 aa19.1■□□□□ 0.65
TRA2A-203ENST00000448549 TNPO2O14787 897 aaKnown RBP19.1■□□□□ 0.65
TRA2A-203ENST00000448549 ADCY3O60266 1144 aa19.1■□□□□ 0.65
TRA2A-203ENST00000448549 GJA8P48165 433 aa19.1■□□□□ 0.65
TRA2A-203ENST00000448549 RRP1BQ14684 758 aaKnown RBP19.1■□□□□ 0.65
TRA2A-203ENST00000448549 ZKSCAN2Q63HK3 967 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms