RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 CBFA2T2O43439 604 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 IGKV5-2P06315 115 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 OAS2P29728 719 aaKnown RBP6.28□□□□□ -1.4
LMO3-209ENST00000447609 ACTN2P35609 894 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 TGFB2P61812 414 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 DDR1Q08345 913 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 GRAPQ13588 217 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 CAMK4Q16566 473 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 PRPF40BQ6NWY9 871 aaKnown RBP6.28□□□□□ -1.4
LMO3-209ENST00000447609 CKAP2LQ8IYA6 745 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 GRAPLQ8TC17 118 aaPredicted RBP6.28□□□□□ -1.4
LMO3-209ENST00000447609 SYT17Q9BSW7 474 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 PALD1Q9ULE6 856 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 FHOD1Q9Y613 1164 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 TTC41PQ6P2S7 1318 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 POLRMTO00411 1230 aaKnown RBP6.28□□□□□ -1.4
LMO3-209ENST00000447609 AP5Z1O43299 807 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 SMC1AQ14683 1233 aaKnown RBP6.28□□□□□ -1.4
LMO3-209ENST00000447609 ERCC6LQ2NKX8 1250 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 ATL3Q6DD88 541 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 SRLQ86TD4 932 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 CCDC83Q8IWF9 413 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 RTKN2Q8IZC4 609 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 USP44Q9H0E7 712 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 ZSCAN16Q9H4T2 348 aaPredicted RBP6.28□□□□□ -1.4
LMO3-209ENST00000447609 TRMT1Q9NXH9 659 aaKnown RBP6.28□□□□□ -1.4
LMO3-209ENST00000447609 HDAC9Q9UKV0 1011 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 JAG2Q9Y219 1238 aa6.28□□□□□ -1.4
LMO3-209ENST00000447609 EYA2O00167 538 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 LMAN1P49257 510 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 ETF1P62495 437 aaKnown RBP6.27□□□□□ -1.4
LMO3-209ENST00000447609 TRIM28Q13263 835 aaKnown RBP6.27□□□□□ -1.4
LMO3-209ENST00000447609 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.4
LMO3-209ENST00000447609 NAA30Q147X3 362 aaPredicted RBP6.27□□□□□ -1.4
LMO3-209ENST00000447609 DOK7Q18PE1 504 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 RPAINQ86UA6 219 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 FCHSD1Q86WN1 690 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 NEK11Q8NG66 645 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 OSBPL5Q9H0X9 879 aaPredicted RBP6.27□□□□□ -1.4
LMO3-209ENST00000447609 TOMM22Q9NS69 142 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 ORC3Q9UBD5 711 aaPredicted RBP6.27□□□□□ -1.4
LMO3-209ENST00000447609 NRBP1Q9UHY1 535 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 JRKLQ9Y4A0 524 aa6.27□□□□□ -1.4
LMO3-209ENST00000447609 H3BQV1 296 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 IDH1O75874 414 aaKnown RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 ATP2B4P23634 1241 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 MMP14P50281 582 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 ATP8B2P98198 1209 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 TUBB2AQ13885 445 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 BRD3Q15059 726 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 IFFO2Q5TF58 517 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 DZIP1Q86YF9 867 aaKnown RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 ZSCAN29Q8IWY8 852 aaPredicted RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 TTC14Q96N46 770 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 TUBB2BQ9BVA1 445 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 SNX14Q9Y5W7 946 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 H7C1W4 665 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 KIF1CO43896 1103 aaKnown RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 NTSR2O95665 410 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 NOP2P46087 812 aaKnown RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 PLA2G4AP47712 749 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 TTLL12Q14166 644 aaPredicted RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 EAPPQ56P03 285 aaPredicted RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 TTLL11Q8NHH1 800 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 ZNF396Q96N95 335 aaPredicted RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 TACO1Q9BSH4 297 aaKnown RBP6.27□□□□□ -1.41
LMO3-209ENST00000447609 SNRKQ9NRH2 765 aa6.27□□□□□ -1.41
LMO3-209ENST00000447609 SGSM2O43147 1006 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 URI1O94763 535 aaPredicted RBP6.26□□□□□ -1.41
LMO3-209ENST00000447609 ZRANB2O95218 330 aaKnown RBP eCLIP6.26□□□□□ -1.41
LMO3-209ENST00000447609 TTC6Q86TZ1 520 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 GOLGA1Q92805 767 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 CELF1Q92879 486 aaKnown RBP6.26□□□□□ -1.41
LMO3-209ENST00000447609 JAKMIP1Q96N16 626 aaKnown RBP6.26□□□□□ -1.41
LMO3-209ENST00000447609 LRRC37A3O60309 1634 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 NRAPQ86VF7 1730 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 DOT1LQ8TEK3 1739 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 UBN2Q6ZU65 1347 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 MYO1BO43795 1136 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 LIG1P18858 919 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 HIBADHP31937 336 aaKnown RBP6.26□□□□□ -1.41
LMO3-209ENST00000447609 RABGGTAQ92696 567 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 FSD1Q9BTV5 496 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 ZNF277Q9NRM2 450 aaPredicted RBP6.26□□□□□ -1.41
LMO3-209ENST00000447609 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.26□□□□□ -1.41
LMO3-209ENST00000447609 ADCY9O60503 1353 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 XDHP47989 1333 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 H7C1D1 291 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 EVCP57679 992 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 CCZ1BP86790 482 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 CCZ1P86791 482 aaPredicted RBP6.26□□□□□ -1.41
LMO3-209ENST00000447609 CHRNDQ07001 517 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 STYK1Q6J9G0 422 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 RUFY3Q7L099 469 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 EFCAB13Q8IY85 973 aa6.26□□□□□ -1.41
LMO3-209ENST00000447609 MSL3Q8N5Y2 521 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms