RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 PTPRCP08575 1304 aa9.05□□□□□ -0.96
R3HDM1-210ENST00000443537 C5P01031 1676 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 ICMTO60725 284 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 VAMP4O75379 141 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 SNRPA1P09661 255 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 MSX1P28360 303 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 RXRBP28702 533 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 RRP1P56182 461 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 PDE3AQ14432 1141 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 FAM196AQ6ZSG2 479 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 PGBD3Q8N328 593 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 MYO19Q96H55 970 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 CHMP4BQ9H444 224 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 SMC4Q9NTJ3 1288 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 KLK14Q9P0G3 267 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 LY75O60449 1722 aa9.04□□□□□ -0.96
R3HDM1-210ENST00000443537 CANXP27824 592 aaKnown RBP9.03□□□□□ -0.96
R3HDM1-210ENST00000443537 C11orf91Q3C1V1 193 aa9.03□□□□□ -0.96
R3HDM1-210ENST00000443537 RIPOR1Q6ZS17 1223 aa9.03□□□□□ -0.96
R3HDM1-210ENST00000443537 MARCH10Q8NA82 808 aaPredicted RBP9.03□□□□□ -0.96
R3HDM1-210ENST00000443537 TRIM47Q96LD4 638 aa9.03□□□□□ -0.96
R3HDM1-210ENST00000443537 STIM2Q9P246 746 aa9.03□□□□□ -0.96
R3HDM1-210ENST00000443537 LRFN2Q9ULH4 789 aa9.03□□□□□ -0.96
R3HDM1-210ENST00000443537 DYRK1BQ9Y463 629 aa9.03□□□□□ -0.96
R3HDM1-210ENST00000443537 COL5A3P25940 1745 aaPredicted RBP9.02□□□□□ -0.96
R3HDM1-210ENST00000443537 PXDNLA1KZ92 1463 aa9.02□□□□□ -0.96
R3HDM1-210ENST00000443537 FAM13AO94988 1023 aa9.02□□□□□ -0.97
R3HDM1-210ENST00000443537 BRD2P25440 801 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-210ENST00000443537 HIF1AQ16665 826 aa9.02□□□□□ -0.97
R3HDM1-210ENST00000443537 ZKSCAN2Q63HK3 967 aa9.02□□□□□ -0.97
R3HDM1-210ENST00000443537 KRT27Q7Z3Y8 459 aa9.02□□□□□ -0.97
R3HDM1-210ENST00000443537 C8orf58Q8NAV2 365 aa9.02□□□□□ -0.97
R3HDM1-210ENST00000443537 DBF4Q9UBU7 674 aaPredicted RBP9.02□□□□□ -0.97
R3HDM1-210ENST00000443537 SUPT16HQ9Y5B9 1047 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-210ENST00000443537 RREB1Q92766 1687 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 F11P03951 625 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 ATP4AP20648 1035 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 MPSTP25325 297 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 PTSQ03393 145 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 TJP1Q07157 1748 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 TSPYL6Q8N831 410 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 SSH1Q8WYL5 1049 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 IFT43Q96FT9 208 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 API5Q9BZZ5 524 aaKnown RBP9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 RUBCNLQ9H714 662 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 TAF1LQ8IZX4 1826 aa9.01□□□□□ -0.97
R3HDM1-210ENST00000443537 IBTKQ9P2D0 1353 aaPredicted RBP9□□□□□ -0.97
R3HDM1-210ENST00000443537 TNFRSF10BO14763 440 aa9□□□□□ -0.97
R3HDM1-210ENST00000443537 STARD3NLO95772 234 aa9□□□□□ -0.97
R3HDM1-210ENST00000443537 ATF7IPQ6VMQ6 1270 aa9□□□□□ -0.97
R3HDM1-210ENST00000443537 FTSJ3Q8IY81 847 aaKnown RBP9□□□□□ -0.97
R3HDM1-210ENST00000443537 PIGBQ92521 554 aa9□□□□□ -0.97
R3HDM1-210ENST00000443537 ZNF496Q96IT1 587 aaPredicted RBP9□□□□□ -0.97
R3HDM1-210ENST00000443537 HSH2DQ96JZ2 352 aa9□□□□□ -0.97
R3HDM1-210ENST00000443537 HYPKQ9NX55 129 aa9□□□□□ -0.97
R3HDM1-210ENST00000443537 MIS18AQ9NYP9 233 aa9□□□□□ -0.97
R3HDM1-210ENST00000443537 ANKIB1Q9P2G1 1089 aa9□□□□□ -0.97
R3HDM1-210ENST00000443537 GPC6Q9Y625 555 aaPredicted RBP9□□□□□ -0.97
R3HDM1-210ENST00000443537 RGS12O14924 1447 aa8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 A0A1W2PNR3 127 aa8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 DDX58O95786 925 aaKnown RBP8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 NOM1Q5C9Z4 860 aaKnown RBP8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 LRRC69Q6ZNQ3 347 aa8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 SYTL4Q96C24 671 aaPredicted RBP8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 SUSD3Q96L08 255 aa8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 ZIC5Q96T25 663 aa8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 DDX21Q9NR30 783 aaKnown RBP eCLIP8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 PALLDQ8WX93 1383 aa8.99□□□□□ -0.97
R3HDM1-210ENST00000443537 ELL2O00472 640 aaPredicted RBP8.98□□□□□ -0.97
R3HDM1-210ENST00000443537 BCAR3O75815 825 aa8.98□□□□□ -0.97
R3HDM1-210ENST00000443537 SLC39A6Q13433 755 aa8.98□□□□□ -0.97
R3HDM1-210ENST00000443537 EFHC2Q5JST6 749 aa8.98□□□□□ -0.97
R3HDM1-210ENST00000443537 ALKBH2Q6NS38 261 aa8.98□□□□□ -0.97
R3HDM1-210ENST00000443537 TNS1Q9HBL0 1735 aaKnown RBP8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 ARFGEF2Q9Y6D5 1785 aa8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 EIF1AXP47813 144 aaKnown RBP8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 MFAP1P55081 439 aaKnown RBP8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 DZIP1LQ8IYY4 767 aaKnown RBP8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 CCDC155Q8N6L0 562 aa8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 ZNF280CQ8ND82 737 aa8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 DDX19BQ9UMR2 479 aa8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 HDAC5Q9UQL6 1122 aa8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 ABCC4O15439 1325 aa8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 NUP188Q5SRE5 1749 aa8.97□□□□□ -0.97
R3HDM1-210ENST00000443537 ANKRD36CQ5JPF3 1778 aa8.96□□□□□ -0.97
R3HDM1-210ENST00000443537 LOC102724428A0A0B4J2F2 783 aa8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 SLC35F4A4IF30 521 aa8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 TGFBR3LH3BV60 316 aa8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 KCNQ3O43525 872 aa8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 TRIM27P14373 513 aa8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 CCT4P50991 539 aaKnown RBP8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 MARSP56192 900 aaKnown RBP8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 SIK1P57059 783 aa8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 KRT24Q2M2I5 525 aa8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 NPM2Q86SE8 214 aaKnown RBP8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 TREML1Q86YW5 311 aa8.96□□□□□ -0.98
R3HDM1-210ENST00000443537 ETFBKMTQ8IXQ9 262 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms