RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 DMDP11532 3685 aa9.76□□□□□ -0.85
SSXP3-201ENST00000442971 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
SSXP3-201ENST00000442971 PRR23AA6NEV1 266 aa9.76□□□□□ -0.85
SSXP3-201ENST00000442971 BTBD11A6QL63 1104 aa9.76□□□□□ -0.85
SSXP3-201ENST00000442971 MYO1BO43795 1136 aa9.76□□□□□ -0.85
SSXP3-201ENST00000442971 GABBR2O75899 941 aa9.76□□□□□ -0.85
SSXP3-201ENST00000442971 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
SSXP3-201ENST00000442971 ZNF579Q8NAF0 562 aaKnown RBP9.75□□□□□ -0.85
SSXP3-201ENST00000442971 TRIB2Q92519 343 aa9.75□□□□□ -0.85
SSXP3-201ENST00000442971 RMDN1Q96DB5 314 aa9.75□□□□□ -0.85
SSXP3-201ENST00000442971 TESK2Q96S53 571 aa9.75□□□□□ -0.85
SSXP3-201ENST00000442971 SLC28A3Q9HAS3 691 aa9.75□□□□□ -0.85
SSXP3-201ENST00000442971 SH2B1Q9NRF2 756 aaPredicted RBP9.75□□□□□ -0.85
SSXP3-201ENST00000442971 MSRAQ9UJ68 235 aa9.75□□□□□ -0.85
SSXP3-201ENST00000442971 MTCH2Q9Y6C9 303 aa9.75□□□□□ -0.85
SSXP3-201ENST00000442971 BRWD1Q9NSI6 2320 aa9.75□□□□□ -0.85
SSXP3-201ENST00000442971 AK9Q5TCS8 1911 aa9.74□□□□□ -0.85
SSXP3-201ENST00000442971 POU3F3P20264 500 aaPredicted RBP9.74□□□□□ -0.85
SSXP3-201ENST00000442971 FPGSQ05932 587 aa9.74□□□□□ -0.85
SSXP3-201ENST00000442971 MOGSQ13724 837 aa9.74□□□□□ -0.85
SSXP3-201ENST00000442971 RAB30Q15771 203 aa9.74□□□□□ -0.85
SSXP3-201ENST00000442971 NKX2-4Q9H2Z4 354 aa9.74□□□□□ -0.85
SSXP3-201ENST00000442971 PCDHAC2Q9Y5I4 1007 aa9.74□□□□□ -0.85
SSXP3-201ENST00000442971 WDR87Q6ZQQ6 2873 aa9.73□□□□□ -0.85
SSXP3-201ENST00000442971 RLFQ13129 1914 aa9.73□□□□□ -0.85
SSXP3-201ENST00000442971 GTPBP6O43824 516 aaPredicted RBP9.73□□□□□ -0.85
SSXP3-201ENST00000442971 PPATQ06203 517 aa9.73□□□□□ -0.85
SSXP3-201ENST00000442971 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
SSXP3-201ENST00000442971 GCN1Q92616 2671 aaKnown RBP9.73□□□□□ -0.85
SSXP3-201ENST00000442971 FRMPD3Q5JV73 1810 aa9.72□□□□□ -0.85
SSXP3-201ENST00000442971 RPS8P62241 208 aaKnown RBP9.72□□□□□ -0.85
SSXP3-201ENST00000442971 PKN1Q16512 942 aa9.72□□□□□ -0.85
SSXP3-201ENST00000442971 TRIM60Q495X7 471 aa9.72□□□□□ -0.85
SSXP3-201ENST00000442971 SLC39A5Q6ZMH5 540 aa9.72□□□□□ -0.85
SSXP3-201ENST00000442971 PRMT6Q96LA8 375 aaPredicted RBP9.72□□□□□ -0.85
SSXP3-201ENST00000442971 TEPSINQ96N21 525 aa9.72□□□□□ -0.85
SSXP3-201ENST00000442971 ALG13Q9NP73 1137 aaKnown RBP9.72□□□□□ -0.85
SSXP3-201ENST00000442971 RTN4Q9NQC3 1192 aaKnown RBP9.72□□□□□ -0.85
SSXP3-201ENST00000442971 FBXO3Q9UK99 471 aa9.72□□□□□ -0.85
SSXP3-201ENST00000442971 GJD2Q9UKL4 321 aa9.72□□□□□ -0.85
SSXP3-201ENST00000442971 CCND3P30281 292 aaPredicted RBP9.71□□□□□ -0.86
SSXP3-201ENST00000442971 CACNB2Q08289 660 aaPredicted RBP9.71□□□□□ -0.86
SSXP3-201ENST00000442971 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.86
SSXP3-201ENST00000442971 BMP8AQ7Z5Y6 402 aa9.71□□□□□ -0.86
SSXP3-201ENST00000442971 MIER1Q8N108 512 aa9.71□□□□□ -0.86
SSXP3-201ENST00000442971 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.71□□□□□ -0.86
SSXP3-201ENST00000442971 RPAP1Q9BWH6 1393 aaPredicted RBP9.71□□□□□ -0.86
SSXP3-201ENST00000442971 TECTAO75443 2155 aa9.71□□□□□ -0.86
SSXP3-201ENST00000442971 GAKO14976 1311 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 AOX1Q06278 1338 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 SH3TC1Q8TE82 1336 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 IL13P35225 146 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 TNFAIP1Q13829 316 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 SF3B3Q15393 1217 aaKnown RBP9.7□□□□□ -0.86
SSXP3-201ENST00000442971 TTLL5Q6EMB2 1281 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 ADSSL1Q8N142 457 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 WRNIP1Q96S55 665 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
SSXP3-201ENST00000442971 ZBTB47Q9UFB7 747 aaPredicted RBP9.7□□□□□ -0.86
SSXP3-201ENST00000442971 TRMT112Q9UI30 125 aaKnown RBP9.7□□□□□ -0.86
SSXP3-201ENST00000442971 RRP7AQ9Y3A4 280 aaKnown RBP9.7□□□□□ -0.86
SSXP3-201ENST00000442971 GBF1Q92538 1859 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 VPS13AQ96RL7 3174 aa9.7□□□□□ -0.86
SSXP3-201ENST00000442971 KMT2EQ8IZD2 1858 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 GNAT3A8MTJ3 354 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 DNM1LO00429 736 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 HMOX1P09601 288 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 RAG1P15918 1043 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 PUM1Q14671 1186 aaKnown RBP eCLIP9.69□□□□□ -0.86
SSXP3-201ENST00000442971 CFAP100Q494V2 611 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 RASIP1Q5U651 963 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 SUGP1Q8IWZ8 645 aaKnown RBP9.69□□□□□ -0.86
SSXP3-201ENST00000442971 FSD1Q9BTV5 496 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 YBX2Q9Y2T7 364 aaKnown RBP9.69□□□□□ -0.86
SSXP3-201ENST00000442971 TACC3Q9Y6A5 838 aa9.69□□□□□ -0.86
SSXP3-201ENST00000442971 SPTBN2O15020 2390 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 H0Y858 1186 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 MYL6BP14649 208 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 ATP2B4P23634 1241 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 SNX17Q15036 470 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 KRT40Q6A162 431 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 NLRP10Q86W26 655 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 ANKRD13CQ8N6S4 541 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 PBXIP1Q96AQ6 731 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 TLR9Q9NR96 1032 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 ZFYVE26Q68DK2 2539 aa9.68□□□□□ -0.86
SSXP3-201ENST00000442971 PLXNB2O15031 1838 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 SOBPA7XYQ1 873 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 RFXAPO00287 272 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 IL9P15248 144 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 CYP2B6P20813 491 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 PPP2R2DQ66LE6 453 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 LURAP1LQ8IV03 231 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 SMCR8Q8TEV9 937 aaPredicted RBP9.67□□□□□ -0.86
SSXP3-201ENST00000442971 TMEM39BQ9GZU3 492 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 COA1Q9GZY4 146 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 DAGLAQ9Y4D2 1042 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 XDHP47989 1333 aa9.67□□□□□ -0.86
SSXP3-201ENST00000442971 KIAA0355O15063 1070 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms