RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 EN2P19622 333 aaPredicted RBP17.06■□□□□ 0.32
PTPRE-203ENST00000442830 RGS3P49796 1198 aa17.06■□□□□ 0.32
PTPRE-203ENST00000442830 RASGRF1Q13972 1273 aa17.06■□□□□ 0.32
PTPRE-203ENST00000442830 ERICH6Q7L0X2 663 aa17.06■□□□□ 0.32
PTPRE-203ENST00000442830 TBC1D2Q9BYX2 928 aa17.06■□□□□ 0.32
PTPRE-203ENST00000442830 ABCF2Q9UG63 623 aa17.06■□□□□ 0.32
PTPRE-203ENST00000442830 SRRDQ9UH36 339 aa17.06■□□□□ 0.32
PTPRE-203ENST00000442830 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
PTPRE-203ENST00000442830 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
PTPRE-203ENST00000442830 ATRNL1Q5VV63 1379 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 MROH7-TTC4A0A0A0MT08 1334 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 ADGRA2Q96PE1 1338 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 CTNND1O60716 968 aaKnown RBP17.05■□□□□ 0.32
PTPRE-203ENST00000442830 IGSF3O75054 1194 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 PSMC4P43686 418 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 CAP1Q01518 475 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 MAP3K10Q02779 954 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 RAET1EQ8TD07 263 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 ZSWIM8A7E2V4 1837 aa17.05■□□□□ 0.32
PTPRE-203ENST00000442830 A0A0G2JLL6 359 aaPredicted RBP17.04■□□□□ 0.32
PTPRE-203ENST00000442830 FMNL1O95466 1100 aaPredicted RBP17.04■□□□□ 0.32
PTPRE-203ENST00000442830 FCGRTP55899 365 aa17.04■□□□□ 0.32
PTPRE-203ENST00000442830 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
PTPRE-203ENST00000442830 PRRT2Q7Z6L0 340 aaPredicted RBP17.04■□□□□ 0.32
PTPRE-203ENST00000442830 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
PTPRE-203ENST00000442830 TRIM47Q96LD4 638 aa17.04■□□□□ 0.32
PTPRE-203ENST00000442830 CPA4Q9UI42 421 aa17.04■□□□□ 0.32
PTPRE-203ENST00000442830 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 PHF20L1A8MW92 1017 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 TBC1D12O60347 775 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 GNAI2P04899 355 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 PTPRAP18433 802 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 ADORA1P30542 326 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 GRK4P32298 578 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 BTDP43251 543 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 TIMM10P62072 90 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 UBXN2AP68543 259 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 ARHGAP39Q9C0H5 1083 aa17.03■□□□□ 0.32
PTPRE-203ENST00000442830 MYPNQ86TC9 1320 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 GPR75-ASB3A0A0A6YYF3 556 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 UQCRFS1P1P0C7P4 283 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 TFCP2Q12800 502 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.32
PTPRE-203ENST00000442830 MOGSQ13724 837 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 SLAIN1Q8ND83 568 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 SH3TC2Q8TF17 1288 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 PNMA3Q9UL41 463 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 AFG3L2Q9Y4W6 797 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 ZHX2Q9Y6X8 837 aa17.02■□□□□ 0.32
PTPRE-203ENST00000442830 CEP290O15078 2479 aa17.01■□□□□ 0.31
PTPRE-203ENST00000442830 BCRP11274 1271 aa17.01■□□□□ 0.31
PTPRE-203ENST00000442830 OSBPP22059 807 aa17.01■□□□□ 0.31
PTPRE-203ENST00000442830 ARID4AP29374 1257 aaPredicted RBP17.01■□□□□ 0.31
PTPRE-203ENST00000442830 HABP4Q5JVS0 413 aaKnown RBP17.01■□□□□ 0.31
PTPRE-203ENST00000442830 NEUROD6Q96NK8 337 aa17.01■□□□□ 0.31
PTPRE-203ENST00000442830 NOL10Q9BSC4 688 aaKnown RBP17.01■□□□□ 0.31
PTPRE-203ENST00000442830 OSBPL5Q9H0X9 879 aaPredicted RBP17.01■□□□□ 0.31
PTPRE-203ENST00000442830 MAST2Q6P0Q8 1798 aa17.01■□□□□ 0.31
PTPRE-203ENST00000442830 ATAD5Q96QE3 1844 aa17■□□□□ 0.31
PTPRE-203ENST00000442830 PLCG2P16885 1265 aa17■□□□□ 0.31
PTPRE-203ENST00000442830 MECOMQ03112 1051 aa17■□□□□ 0.31
PTPRE-203ENST00000442830 GPAT2Q6NUI2 795 aa17■□□□□ 0.31
PTPRE-203ENST00000442830 ZFPM1Q8IX07 1006 aa17■□□□□ 0.31
PTPRE-203ENST00000442830 SPATA5Q8NB90 893 aa17■□□□□ 0.31
PTPRE-203ENST00000442830 PABPC4Q13310 644 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPRE-203ENST00000442830 PICALMQ13492 652 aa16.99■□□□□ 0.31
PTPRE-203ENST00000442830 GADL1Q6ZQY3 521 aa16.99■□□□□ 0.31
PTPRE-203ENST00000442830 PROCA1Q8NCQ7 364 aaPredicted RBP16.99■□□□□ 0.31
PTPRE-203ENST00000442830 SMCR8Q8TEV9 937 aaPredicted RBP16.99■□□□□ 0.31
PTPRE-203ENST00000442830 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
PTPRE-203ENST00000442830 HMG20BQ9P0W2 317 aa16.99■□□□□ 0.31
PTPRE-203ENST00000442830 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
PTPRE-203ENST00000442830 LOC285556D6RIA3 1793 aa16.98■□□□□ 0.31
PTPRE-203ENST00000442830 DDTLA6NHG4 134 aaPredicted RBP16.98■□□□□ 0.31
PTPRE-203ENST00000442830 GJB1P08034 283 aa16.98■□□□□ 0.31
PTPRE-203ENST00000442830 TRIM27P14373 513 aa16.98■□□□□ 0.31
PTPRE-203ENST00000442830 RHBDL3P58872 404 aa16.98■□□□□ 0.31
PTPRE-203ENST00000442830 SH3BP5LQ7L8J4 393 aa16.98■□□□□ 0.31
PTPRE-203ENST00000442830 NSUN4Q96CB9 384 aaKnown RBP16.98■□□□□ 0.31
PTPRE-203ENST00000442830 HTATIP2Q9BUP3 242 aa16.98■□□□□ 0.31
PTPRE-203ENST00000442830 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.98■□□□□ 0.31
PTPRE-203ENST00000442830 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
PTPRE-203ENST00000442830 BIN2Q9UBW5 565 aaPredicted RBP16.98■□□□□ 0.31
PTPRE-203ENST00000442830 HERC5Q9UII4 1024 aaKnown RBP16.98■□□□□ 0.31
PTPRE-203ENST00000442830 BAG3O95817 575 aa16.97■□□□□ 0.31
PTPRE-203ENST00000442830 CYP2C8P10632 490 aa16.97■□□□□ 0.31
PTPRE-203ENST00000442830 GJA8P48165 433 aa16.97■□□□□ 0.31
PTPRE-203ENST00000442830 PXYLP1Q8TE99 480 aa16.97■□□□□ 0.31
PTPRE-203ENST00000442830 DHX36Q9H2U1 1008 aaKnown RBP16.97■□□□□ 0.31
PTPRE-203ENST00000442830 AS3MTQ9HBK9 375 aa16.97■□□□□ 0.31
PTPRE-203ENST00000442830 RAI14Q9P0K7 980 aa16.97■□□□□ 0.31
PTPRE-203ENST00000442830 LRP2BPQ9P2M1 347 aa16.97■□□□□ 0.31
PTPRE-203ENST00000442830 FOCADQ5VW36 1801 aa16.96■□□□□ 0.31
PTPRE-203ENST00000442830 CTGFP29279 349 aa16.96■□□□□ 0.31
PTPRE-203ENST00000442830 GCLCP48506 637 aaPredicted RBP16.96■□□□□ 0.31
PTPRE-203ENST00000442830 PRKCZQ05513 592 aa16.96■□□□□ 0.31
PTPRE-203ENST00000442830 IRF5Q13568 498 aa16.96■□□□□ 0.31
PTPRE-203ENST00000442830 FAM110CQ1W6H9 321 aa16.96■□□□□ 0.31
PTPRE-203ENST00000442830 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms