RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ELP3Q9H9T3 547 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 CREBZFQ9NS37 354 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 ZNF70Q9UC06 446 aaPredicted RBP5.66□□□□□ -1.5
EDEM3-203ENST00000439962 DICER1Q9UPY3 1922 aaKnown RBP5.66□□□□□ -1.5
EDEM3-203ENST00000439962 CHMLP26374 656 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 BTDP43251 543 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 LBX1P52954 281 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 MAPKAPK5Q8IW41 473 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 MAGEB6Q8N7X4 407 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 RUFY2Q8WXA3 655 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 KCNB2Q92953 911 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 VPS33BQ9H267 617 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 TMOD2Q9NZR1 351 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 WDR33Q9C0J8 1336 aaKnown RBP5.66□□□□□ -1.5
EDEM3-203ENST00000439962 EYSQ5T1H1 3165 aa5.66□□□□□ -1.5
EDEM3-203ENST00000439962 MBD3O95983 291 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 COL1A1P02452 1464 aaPredicted RBP5.65□□□□□ -1.5
EDEM3-203ENST00000439962 NF2P35240 595 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 EVX2Q03828 476 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 HS1BP3Q53T59 392 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 ADGRA1Q86SQ6 560 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 WDR66Q8TBY9 1149 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 OTUD5Q96G74 571 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 PASKQ96RG2 1323 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 PIH1D3Q9NQM4 214 aaKnown RBP5.65□□□□□ -1.5
EDEM3-203ENST00000439962 DENND2AQ9ULE3 1009 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 DAGLAQ9Y4D2 1042 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 IRS2Q9Y4H2 1338 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 GLRX3O76003 335 aaKnown RBP5.65□□□□□ -1.5
EDEM3-203ENST00000439962 CIAO1O76071 339 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 BAG4O95429 457 aaKnown RBP5.65□□□□□ -1.5
EDEM3-203ENST00000439962 HSPA4P34932 840 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 DGKZQ13574 1117 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 SHROOM1Q2M3G4 852 aaPredicted RBP5.65□□□□□ -1.5
EDEM3-203ENST00000439962 NAA16Q6N069 864 aaPredicted RBP5.65□□□□□ -1.5
EDEM3-203ENST00000439962 APOBEC3HQ6NTF7 200 aaKnown RBP5.65□□□□□ -1.5
EDEM3-203ENST00000439962 CDC42EP5Q6NZY7 148 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 TGFBRAP1Q8WUH2 860 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 WRNIP1Q96S55 665 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 TM6SF1Q9BZW5 370 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 ALDH8A1Q9H2A2 487 aaPredicted RBP5.65□□□□□ -1.5
EDEM3-203ENST00000439962 PALD1Q9ULE6 856 aa5.65□□□□□ -1.5
EDEM3-203ENST00000439962 FOXN1O15353 648 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 PPP1R12BO60237 982 aaPredicted RBP5.65□□□□□ -1.51
EDEM3-203ENST00000439962 TBC1D8O95759 1140 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 CYP7A1P22680 504 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 INPP5BP32019 993 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 ZNF280AP59817 542 aaPredicted RBP5.65□□□□□ -1.51
EDEM3-203ENST00000439962 ZYXQ15942 572 aaKnown RBP5.65□□□□□ -1.51
EDEM3-203ENST00000439962 SLC9C2Q5TAH2 1124 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 POTEHQ6S545 545 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 SLC10A4Q96EP9 437 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 CSRNP1Q96S65 589 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 GRPEL1Q9HAV7 217 aa5.65□□□□□ -1.51
EDEM3-203ENST00000439962 MYO3BQ8WXR4 1341 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 TRIM6-TRIM34B2RNG4 842 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 SMIM22K7EJ46 135 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 PI4K2BQ8TCG2 481 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 SH3RF3Q8TEJ3 882 aaPredicted RBP5.64□□□□□ -1.51
EDEM3-203ENST00000439962 ZNF384Q8TF68 577 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 TBC1D22AQ8WUA7 517 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 SDR42E1Q8WUS8 393 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 RILPL2Q969X0 211 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 AIDAQ96BJ3 306 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 DDX4Q9NQI0 724 aaKnown RBP5.64□□□□□ -1.51
EDEM3-203ENST00000439962 MTMR7Q9Y216 660 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 CASP8AP2Q9UKL3 1982 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 ADAMTSL1Q8N6G6 1762 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 APPP05067 770 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 KIF23Q02241 960 aaPredicted RBP5.64□□□□□ -1.51
EDEM3-203ENST00000439962 CCDC173Q0VFZ6 552 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 RGMBQ6NW40 437 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 TEX11Q8IYF3 940 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 TMEM87AQ8NBN3 555 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 ZC3H15Q8WU90 426 aaKnown RBP5.64□□□□□ -1.51
EDEM3-203ENST00000439962 NOL10Q9BSC4 688 aaKnown RBP5.64□□□□□ -1.51
EDEM3-203ENST00000439962 PRUNE2Q8WUY3 3088 aa5.64□□□□□ -1.51
EDEM3-203ENST00000439962 DDTLA6NHG4 134 aaPredicted RBP5.63□□□□□ -1.51
EDEM3-203ENST00000439962 TRIM75PA6NK02 468 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 SGSM2O43147 1006 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 GDF11O95390 407 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 CD2BP2O95400 341 aaKnown RBP5.63□□□□□ -1.51
EDEM3-203ENST00000439962 XRCC6P12956 609 aaKnown RBP eCLIP5.63□□□□□ -1.51
EDEM3-203ENST00000439962 USP5P45974 858 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 SYAP1Q96A49 352 aaPredicted RBP5.63□□□□□ -1.51
EDEM3-203ENST00000439962 ZSCAN31Q96LW9 406 aaPredicted RBP5.63□□□□□ -1.51
EDEM3-203ENST00000439962 PPP1R9BQ96SB3 815 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 SERPINA10Q9UK55 444 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 TAOK2Q9UL54 1235 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 LRRC37AA6NMS7 1700 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 WDR90Q96KV7 1748 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 CYP2D7A0A087X1C5 515 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 PRKAB2O43741 272 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 PEX10O60683 326 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 BRD1O95696 1058 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 ATP2B2Q01814 1243 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 CSPP1Q1MSJ5 1256 aa5.63□□□□□ -1.51
EDEM3-203ENST00000439962 APOBEC3FQ8IUX4 373 aaKnown RBP5.63□□□□□ -1.51
EDEM3-203ENST00000439962 NSUN4Q96CB9 384 aaKnown RBP5.63□□□□□ -1.51
EDEM3-203ENST00000439962 EVI5LQ96CN4 794 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms