RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ZNF396Q96N95 335 aaPredicted RBP30.03■■■□□ 2.4
CPNE1-216ENST00000437340 MAST2Q6P0Q8 1798 aa30.02■■■□□ 2.4
CPNE1-216ENST00000437340 KLRG2A4D1S0 409 aaPredicted RBP30.02■■■□□ 2.4
CPNE1-216ENST00000437340 GOLGA6L4A6NEF3 574 aa30.02■■■□□ 2.4
CPNE1-216ENST00000437340 ADD1P35611 737 aaKnown RBP30.02■■■□□ 2.4
CPNE1-216ENST00000437340 WDR66Q8TBY9 1149 aa30.02■■■□□ 2.4
CPNE1-216ENST00000437340 UPF1Q92900 1129 aaKnown RBP eCLIP30.02■■■□□ 2.4
CPNE1-216ENST00000437340 HOXA10P31260 410 aaPredicted RBP30.01■■■□□ 2.39
CPNE1-216ENST00000437340 DYNLL1P63167 89 aaKnown RBP30.01■■■□□ 2.39
CPNE1-216ENST00000437340 CHAF1AQ13111 956 aaPredicted RBP30.01■■■□□ 2.39
CPNE1-216ENST00000437340 FBXO18Q8NFZ0 1043 aa30.01■■■□□ 2.39
CPNE1-216ENST00000437340 CCDC69A6NI79 296 aa30■■■□□ 2.39
CPNE1-216ENST00000437340 BBOX1O75936 387 aa30■■■□□ 2.39
CPNE1-216ENST00000437340 RCAN1P53805 252 aa30■■■□□ 2.39
CPNE1-216ENST00000437340 CCDC173Q0VFZ6 552 aa30■■■□□ 2.39
CPNE1-216ENST00000437340 ZNF804AQ7Z570 1209 aa30■■■□□ 2.39
CPNE1-216ENST00000437340 TDRD7Q8NHU6 1098 aaKnown RBP30■■■□□ 2.39
CPNE1-216ENST00000437340 SLC12A7Q9Y666 1083 aa30■■■□□ 2.39
CPNE1-216ENST00000437340 SYNE3Q6ZMZ3 975 aa30■■■□□ 2.39
CPNE1-216ENST00000437340 SENP2Q9HC62 589 aa30■■■□□ 2.39
CPNE1-216ENST00000437340 ERICH2A1L162 156 aa29.99■■■□□ 2.39
CPNE1-216ENST00000437340 RAB11FIP4Q86YS3 637 aa29.99■■■□□ 2.39
CPNE1-216ENST00000437340 ESR2Q92731 530 aa29.99■■■□□ 2.39
CPNE1-216ENST00000437340 CRNKL1Q9BZJ0 848 aaKnown RBP29.99■■■□□ 2.39
CPNE1-216ENST00000437340 TOMM22Q9NS69 142 aa29.99■■■□□ 2.39
CPNE1-216ENST00000437340 RCOR1Q9UKL0 485 aa29.99■■■□□ 2.39
CPNE1-216ENST00000437340 GOLGA8AA7E2F4 631 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 MINDY4BA8MYZ0 360 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 ATP2B4P23634 1241 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 PRDX5P30044 214 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 FOSBP53539 338 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 RRP12Q5JTH9 1297 aaKnown RBP29.98■■■□□ 2.39
CPNE1-216ENST00000437340 MICU3Q86XE3 530 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 CRAMP1Q96RY5 1269 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 PPP1R9BQ96SB3 815 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 PPFIA3O75145 1194 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 FGRP09769 529 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 WTAPQ15007 396 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 SLC51AQ86UW1 340 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 ATP8A2Q9NTI2 1148 aa29.98■■■□□ 2.39
CPNE1-216ENST00000437340 MYH15Q9Y2K3 1946 aa29.97■■■□□ 2.39
CPNE1-216ENST00000437340 CDC27P30260 824 aa29.97■■■□□ 2.39
CPNE1-216ENST00000437340 GPSM2P81274 684 aa29.96■■■□□ 2.39
CPNE1-216ENST00000437340 GUCY1B3Q02153 619 aa29.96■■■□□ 2.39
CPNE1-216ENST00000437340 NTRK3Q16288 839 aa29.96■■■□□ 2.39
CPNE1-216ENST00000437340 TMC4Q7Z404 712 aa29.96■■■□□ 2.39
CPNE1-216ENST00000437340 BRAPQ7Z569 592 aa29.96■■■□□ 2.39
CPNE1-216ENST00000437340 PODXL2Q9NZ53 605 aa29.96■■■□□ 2.39
CPNE1-216ENST00000437340 STK36Q9NRP7 1315 aa29.96■■■□□ 2.39
CPNE1-216ENST00000437340 TPRNQ4KMQ1 711 aa29.95■■■□□ 2.39
CPNE1-216ENST00000437340 FAM217BQ9NTX9 383 aaPredicted RBP29.95■■■□□ 2.39
CPNE1-216ENST00000437340 CCDC88AQ3V6T2 1871 aa29.95■■■□□ 2.39
CPNE1-216ENST00000437340 KIAA1551Q9HCM1 1747 aa29.95■■■□□ 2.38
CPNE1-216ENST00000437340 CTR9Q6PD62 1173 aa29.95■■■□□ 2.38
CPNE1-216ENST00000437340 DZIP1Q86YF9 867 aaKnown RBP29.95■■■□□ 2.38
CPNE1-216ENST00000437340 PGBD1Q96JS3 809 aa29.95■■■□□ 2.38
CPNE1-216ENST00000437340 UBAC1Q9BSL1 405 aa29.95■■■□□ 2.38
CPNE1-216ENST00000437340 DDX19AQ9NUU7 478 aaKnown RBP29.95■■■□□ 2.38
CPNE1-216ENST00000437340 AATFQ9NY61 560 aaKnown RBP eCLIP29.95■■■□□ 2.38
CPNE1-216ENST00000437340 LRRC37AA6NMS7 1700 aa29.94■■■□□ 2.38
CPNE1-216ENST00000437340 LDHBP07195 334 aaKnown RBP29.93■■■□□ 2.38
CPNE1-216ENST00000437340 IARSP41252 1262 aaKnown RBP29.93■■■□□ 2.38
CPNE1-216ENST00000437340 DCP1AQ9NPI6 582 aaPredicted RBP29.93■■■□□ 2.38
CPNE1-216ENST00000437340 GGA1Q9UJY5 639 aa29.93■■■□□ 2.38
CPNE1-216ENST00000437340 LIG1P18858 919 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 RXRAP19793 462 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 PDE6BP35913 854 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 GSTO1P78417 241 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 SLC16A10Q8TF71 515 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 USP28Q96RU2 1077 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 ALG1Q9BT22 464 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 DUOX1Q9NRD9 1551 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 CCDC196A0A1B0GTZ2 297 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 SRGNP10124 158 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 IFNAR1P17181 557 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 PPP2R5BQ15173 497 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 SBK1Q52WX2 424 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 NUP62CLQ9H1M0 184 aa29.92■■■□□ 2.38
CPNE1-216ENST00000437340 ARPP21Q9UBL0 812 aaPredicted RBP29.92■■■□□ 2.38
CPNE1-216ENST00000437340 UFL1O94874 794 aa29.91■■■□□ 2.38
CPNE1-216ENST00000437340 OTUD7BQ6GQQ9 843 aa29.91■■■□□ 2.38
CPNE1-216ENST00000437340 FUCA2Q9BTY2 467 aa29.91■■■□□ 2.38
CPNE1-216ENST00000437340 RTEL1Q9NZ71 1219 aa29.91■■■□□ 2.38
CPNE1-216ENST00000437340 USP17L12C9JPN9 530 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 USP17L21D6R901 530 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 SEC23AQ15436 765 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 BICD2Q8TD16 824 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 ORC4O43929 436 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 IL1R1P14778 569 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 NT5C2P49902 561 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 KIF23Q02241 960 aaPredicted RBP29.9■■■□□ 2.38
CPNE1-216ENST00000437340 RTN1Q16799 776 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 UVSSAQ2YD98 709 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 WASF1Q92558 559 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 ZKSCAN3Q9BRR0 538 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 MYL10Q9BUA6 226 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 DACT1Q9NYF0 836 aa29.9■■■□□ 2.38
CPNE1-216ENST00000437340 FMNL1O95466 1100 aaPredicted RBP29.89■■■□□ 2.38
CPNE1-216ENST00000437340 SLC3A2P08195 630 aaKnown RBP29.89■■■□□ 2.38
CPNE1-216ENST00000437340 NPR1P16066 1061 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms