RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 KRT23Q9C075 422 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
CLIP4-204ENST00000404424 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
CLIP4-204ENST00000404424 WWC3Q9ULE0 1092 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 SLC12A7Q9Y666 1083 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 MYH3P11055 1940 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
CLIP4-204ENST00000404424 ERVV-1B6SEH8 477 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
CLIP4-204ENST00000404424 IFNAR1P17181 557 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 FGFR2P21802 821 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 IFNL3Q8IZI9 196 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 CNNM3Q8NE01 707 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 NOL10Q9BSC4 688 aaKnown RBP12.36□□□□□ -0.43
CLIP4-204ENST00000404424 NAPBQ9H115 298 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 KCNH3Q9ULD8 1083 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
CLIP4-204ENST00000404424 RANBP6O60518 1105 aaKnown RBP12.36□□□□□ -0.43
CLIP4-204ENST00000404424 KIF20AO95235 890 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 SERPINC1P01008 464 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 RXRAP19793 462 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 MAP3K12Q12852 859 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 PNOCQ13519 176 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 SAFBQ15424 915 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLIP4-204ENST00000404424 FCHSD1Q86WN1 690 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
CLIP4-204ENST00000404424 NKX2-3Q8TAU0 364 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 TMX1Q9H3N1 280 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 LRP6O75581 1613 aa12.36□□□□□ -0.43
CLIP4-204ENST00000404424 ATP1A3P13637 1013 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 GNAT2P19087 354 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 CCDC93Q567U6 631 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 NOSTRINQ8IVI9 506 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 VSTM4Q8IW00 320 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 ZSWIM5Q9P217 1185 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 ANKRD36CQ5JPF3 1778 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 CYP19A1P11511 503 aaPredicted RBP12.35□□□□□ -0.43
CLIP4-204ENST00000404424 SLC5A1P13866 664 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 RCAN1P53805 252 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 GABPB1Q06547 395 aaPredicted RBP12.35□□□□□ -0.43
CLIP4-204ENST00000404424 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 LONRF3Q496Y0 759 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 KMT5BQ4FZB7 885 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 AKNAD1Q5T1N1 836 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 ISM2Q6H9L7 571 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
CLIP4-204ENST00000404424 TMTC2Q8N394 836 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 SPATA5Q8NB90 893 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 CLIC6Q96NY7 704 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
CLIP4-204ENST00000404424 PHLPP2Q6ZVD8 1323 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 MMP1P03956 469 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
CLIP4-204ENST00000404424 RILPL1Q5EBL4 403 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 SYT10Q6XYQ8 523 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 TRIM22Q8IYM9 498 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 FOXP1Q9H334 677 aaPredicted RBP12.34□□□□□ -0.43
CLIP4-204ENST00000404424 EPB41L4AQ9HCS5 686 aaPredicted RBP12.34□□□□□ -0.43
CLIP4-204ENST00000404424 DACH1Q9UI36 760 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 PCDHA5Q9Y5H7 936 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 LRP5O75197 1615 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
CLIP4-204ENST00000404424 ETF1P62495 437 aaKnown RBP12.34□□□□□ -0.43
CLIP4-204ENST00000404424 ELF2Q15723 593 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 MFSD6Q6ZSS7 791 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 STAG1Q8WVM7 1258 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 NACAP1Q9BZK3 213 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 TIAM2Q8IVF5 1701 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
CLIP4-204ENST00000404424 ABCA3Q99758 1704 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 PTPREP23469 700 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-204ENST00000404424 NT5DC1Q5TFE4 455 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 HOMER1Q86YM7 354 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 FOXP4Q8IVH2 680 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-204ENST00000404424 KRT222Q8N1A0 295 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 MAGEB6Q8N7X4 407 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
CLIP4-204ENST00000404424 SRRTQ9BXP5 876 aaKnown RBP12.33□□□□□ -0.44
CLIP4-204ENST00000404424 MYO5AQ9Y4I1 1855 aaKnown RBP12.33□□□□□ -0.44
CLIP4-204ENST00000404424 ECM29Q5VYK3 1845 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 PNPLA7Q6ZV29 1317 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 ZSCAN12O43309 604 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 MBD4O95243 580 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
CLIP4-204ENST00000404424 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 KANK3Q6NY19 840 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 ZNF34Q8IZ26 560 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 TRIML1Q8N9V2 468 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 DPF2Q92785 391 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 FAM53CQ9NYF3 392 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
CLIP4-204ENST00000404424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.33□□□□□ -0.44
CLIP4-204ENST00000404424 XIRP1Q702N8 1843 aaKnown RBP12.33□□□□□ -0.44
CLIP4-204ENST00000404424 ERICH2A1L162 156 aa12.32□□□□□ -0.44
CLIP4-204ENST00000404424 GSG1L2A8MUP6 293 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms