RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 TTC5Q8N0Z6 440 aa9.08□□□□□ -0.96
GAPVD1-207ENST00000394105 PHKBQ93100 1093 aa9.08□□□□□ -0.96
GAPVD1-207ENST00000394105 ZSCAN31Q96LW9 406 aaPredicted RBP9.08□□□□□ -0.96
GAPVD1-207ENST00000394105 ATP1A3P13637 1013 aa9.08□□□□□ -0.96
GAPVD1-207ENST00000394105 H2AFXP16104 143 aaPredicted RBP9.08□□□□□ -0.96
GAPVD1-207ENST00000394105 IL6STP40189 918 aaPredicted RBP9.08□□□□□ -0.96
GAPVD1-207ENST00000394105 COL4A5P29400 1685 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 VPS37CA5D8V6 355 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 ERVV-1B6SEH8 477 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 ZRANB2O95218 330 aaKnown RBP eCLIP9.07□□□□□ -0.967e-6■■■■■ 37.3
GAPVD1-207ENST00000394105 IFIT1P09914 478 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 SARM1Q6SZW1 724 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 SGMS1Q86VZ5 419 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 APPBP2Q92624 585 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 MYH4Q9Y623 1939 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 PLA2G4AP47712 749 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 CELF1Q92879 486 aaKnown RBP9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 RTEL1Q9NZ71 1219 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 FBXO3Q9UK99 471 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 IRS4O14654 1257 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 CTDSPL2Q05D32 466 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 FAM182BQ5T319 152 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 TICAM2Q86XR7 235 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 RNF225M0QZC1 329 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 CSB-PGBD3P0DP91 1061 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 FAM184AQ8NB25 1140 aa9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 U3KPZ7 1027 aaPredicted RBP9.07□□□□□ -0.96
GAPVD1-207ENST00000394105 GTF2E1P29083 439 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 NEXNQ0ZGT2 675 aa9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 LLPHQ9BRT6 129 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 L2HGDHQ9H9P8 463 aa9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 OS9Q13438 667 aaPredicted RBP9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 CLIC6Q96NY7 704 aa9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 ZNFX1Q9P2E3 1918 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 SLURP2P0DP57 97 aa9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 NEUROD6Q96NK8 337 aa9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 MYH10P35580 1976 aa9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 PARP14Q460N5 1801 aa9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 A0A1B0GVL5 298 aa9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 SARSP49591 514 aaKnown RBP9.06□□□□□ -0.96
GAPVD1-207ENST00000394105 WDR19Q8NEZ3 1342 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 SLX4Q8IY92 1834 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 NMT2O60551 498 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 TMOD3Q9NYL9 352 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 TUBE1Q9UJT0 475 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 TBC1D9BQ66K14 1250 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 ACSBG1Q96GR2 724 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 KIF3AQ9Y496 699 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 LOC102724428A0A0B4J2F2 783 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 B4E1Z4 1266 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 TMEM232C9JQI7 657 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 SIK1P57059 783 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 ALX1Q15699 326 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 PRR29P0C7W0 189 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 FOSBP53539 338 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 REXO1L1PQ8IX06 675 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 IL17RBQ9NRM6 502 aa9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 SPTBN5Q9NRC6 3674 aaKnown RBP9.05□□□□□ -0.96
GAPVD1-207ENST00000394105 UBE3CQ15386 1083 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 ERFEQ4G0M1 354 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 C4orf32Q8N8J7 132 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 FAM84BQ96KN1 310 aaPredicted RBP9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 PRC1O43663 620 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 FMR1Q06787 632 aaKnown RBP eCLIP9.04□□□□□ -0.963e-7■□□□□ 11.2
GAPVD1-207ENST00000394105 TROAPQ12815 778 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 CSPP1Q1MSJ5 1256 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 PROM2Q8N271 834 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 RUFY2Q8WXA3 655 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 POLR3EQ9NVU0 708 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 CEBPZQ03701 1054 aaKnown RBP9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 MCCP23508 829 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 NR5A1Q13285 461 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 MYSM1Q5VVJ2 828 aa9.04□□□□□ -0.96
GAPVD1-207ENST00000394105 HIP1O00291 1037 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 CD44P16070 742 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 SLC9C2Q5TAH2 1124 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 CCAR2Q8N163 923 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 SDR42E1Q8WUS8 393 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 PNPLA7Q6ZV29 1317 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 LONRF3Q496Y0 759 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 IFNL3Q8IZI9 196 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 DYNLL1P63167 89 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 NT5DC1Q5TFE4 455 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 DZIP3Q86Y13 1208 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 CCDC24Q8N4L8 307 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 TEX13AQ9BXU3 409 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 ARMT1Q9H993 441 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 FBXO2Q9UK22 296 aaPredicted RBP9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 PDE8AO60658 829 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 CASP1P29466 404 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 SPATA5Q8NB90 893 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 SRP68Q9UHB9 627 aaKnown RBP9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 SZT2Q5T011 3432 aa9.03□□□□□ -0.96
GAPVD1-207ENST00000394105 ZNF165P49910 485 aa9.02□□□□□ -0.96
GAPVD1-207ENST00000394105 CHRNDQ07001 517 aa9.02□□□□□ -0.96
GAPVD1-207ENST00000394105 TERF2Q15554 542 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms