RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CA8P35219 290 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 PAFAH1B1P43034 410 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 TAF11Q15544 211 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 TSNAXIP1Q2TAA8 658 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 TOM1L2Q6ZVM7 507 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 KRT28Q7Z3Y7 464 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 CLASRPQ8N2M8 674 aaKnown RBP8.57□□□□□ -1.04
VTI1A-201ENST00000393077 KCNH5Q8NCM2 988 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 FAXDC2Q96IV6 333 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 ZMAT2Q96NC0 199 aaKnown RBP8.57□□□□□ -1.04
VTI1A-201ENST00000393077 GBP5Q96PP8 586 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 SUGCTQ9HAC7 445 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 MBIPQ9NS73 344 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 PAIP2BQ9ULR5 123 aaKnown RBP8.57□□□□□ -1.04
VTI1A-201ENST00000393077 EIF4E1BA6NMX2 242 aaKnown RBP8.57□□□□□ -1.04
VTI1A-201ENST00000393077 GNAT1P11488 350 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 TBC1D8BQ0IIM8 1120 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 CTNNBL1Q8WYA6 563 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-201ENST00000393077 TEX13AQ9BXU3 409 aaPredicted RBP8.57□□□□□ -1.04
VTI1A-201ENST00000393077 TSGA10Q9BZW7 698 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 AATFQ9NY61 560 aaKnown RBP eCLIP8.57□□□□□ -1.04
VTI1A-201ENST00000393077 PALD1Q9ULE6 856 aa8.57□□□□□ -1.04
VTI1A-201ENST00000393077 LUC7L2Q9Y383 392 aaKnown RBP8.57□□□□□ -1.04
VTI1A-201ENST00000393077 RASSF10A6NK89 507 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 FERP16591 822 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 DDR1Q08345 913 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 NEXNQ0ZGT2 675 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 MTA1Q13330 715 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 MPRIPQ6WCQ1 1025 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 EZH1Q92800 747 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 CFAP74Q9C0B2 1584 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 OSBPL5Q9H0X9 879 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 ABCA9Q8IUA7 1624 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 F6X3S4 739 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 EIF3HO15372 352 aaKnown RBP eCLIP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 HIP1RO75146 1068 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 NBPF7P0C2Y1 421 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 UBTFL1P0CB47 393 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 TATP17735 454 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 ZC3H12AQ5D1E8 599 aaKnown RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 KCTD16Q68DU8 428 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 GBP7Q8N8V2 638 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 CCHCR1Q8TD31 782 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 FUCA2Q9BTY2 467 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 EFCAB6Q5THR3 1501 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 ABCC11Q96J66 1382 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 ZBTB7BO15156 539 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 MAFGO15525 162 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 GGCXP38435 758 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 VAV2P52735 878 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 MRPL12P52815 198 aaKnown RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 CHRNA2Q15822 529 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 KRT24Q2M2I5 525 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 BEND6Q5SZJ8 279 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 FKBP15Q5T1M5 1219 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 RINLQ6ZS11 566 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 SPATA21Q7Z572 469 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 MFN1Q8IWA4 741 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 HNRNPLLQ8WVV9 542 aaKnown RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 MRPS27Q92552 414 aaKnown RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 PARP3Q9Y6F1 533 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 SBNO2Q9Y2G9 1366 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 CLTCL1P53675 1640 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 BCORL1Q5H9F3 1711 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 PYGLP06737 847 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 VSNL1P62760 191 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 HLTFQ14527 1009 aaKnown RBP eCLIP8.56□□□□□ -1.042e-6■■■■□ 23.7
VTI1A-201ENST00000393077 RIC3Q7Z5B4 369 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 FAM81AQ8TBF8 368 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 ABTB1Q969K4 478 aaPredicted RBP8.56□□□□□ -1.04
VTI1A-201ENST00000393077 ALS2CR12Q96Q35 445 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 FAM184BQ9ULE4 1060 aa8.56□□□□□ -1.04
VTI1A-201ENST00000393077 UNC13BO14795 1591 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 MAP3K19Q56UN5 1328 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 CUTAO60888 179 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 MAP3K9P80192 1104 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 MTX1Q13505 466 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 IMMTQ16891 758 aaKnown RBP8.55□□□□□ -1.04
VTI1A-201ENST00000393077 CCDC96Q2M329 555 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 CYB5D1Q6P9G0 228 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 GUCA1BQ9UMX6 200 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 USH1CQ9Y6N9 552 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 GKAP1Q5VSY0 366 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-201ENST00000393077 TSPYL6Q8N831 410 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 IL17RAQ96F46 866 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 ORAI2Q96SN7 254 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 SPG7Q9UQ90 795 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 BTBD11A6QL63 1104 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 CPLX1O14810 134 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 ZNF189O75820 626 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-201ENST00000393077 DDX58O95786 925 aaKnown RBP8.55□□□□□ -1.04
VTI1A-201ENST00000393077 PDHBP11177 359 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 GBP1P32455 592 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 SESN3P58005 492 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 C11orf91Q3C1V1 193 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 CABLES1Q8TDN4 633 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 RIN2Q8WYP3 895 aaPredicted RBP8.55□□□□□ -1.04
VTI1A-201ENST00000393077 IFT74Q96LB3 600 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 HAUS2Q9NVX0 235 aa8.55□□□□□ -1.04
VTI1A-201ENST00000393077 L1RE1Q9UN81 338 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms