RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 SCLT1Q96NL6 688 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 RUFY1Q96T51 708 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 A1CFQ9NQ94 594 aaKnown RBP21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 KLC4Q9NSK0 619 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 GUCA1BQ9UMX6 200 aa21.53■■□□□ 1.04
SMARCD1-201ENST00000381513 CCDC102BQ68D86 513 aa21.52■■□□□ 1.04
SMARCD1-201ENST00000381513 SELENOOQ9BVL4 669 aa21.52■■□□□ 1.04
SMARCD1-201ENST00000381513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.52■■□□□ 1.04
SMARCD1-201ENST00000381513 ATP1A2P50993 1020 aa21.52■■□□□ 1.04
SMARCD1-201ENST00000381513 USP14P54578 494 aa21.52■■□□□ 1.04
SMARCD1-201ENST00000381513 FAM43BQ6ZT52 329 aaPredicted RBP21.52■■□□□ 1.04
SMARCD1-201ENST00000381513 STK11IPQ8N1F8 1099 aa21.52■■□□□ 1.04
SMARCD1-201ENST00000381513 TEX33O43247 280 aa21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 DDR1Q08345 913 aa21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 STOX1Q6ZVD7 989 aa21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 MED23Q9ULK4 1368 aa21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 MEFVO15553 781 aaPredicted RBP21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 E2F5Q15329 346 aa21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 CPLX1O14810 134 aa21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 RBM28Q9NW13 759 aaKnown RBP21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 HDAC6Q9UBN7 1215 aa21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 MAP3K19Q56UN5 1328 aa21.51■■□□□ 1.03
SMARCD1-201ENST00000381513 A0A1B0GUA9 196 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 SKAP2O75563 359 aaPredicted RBP21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 ARHGAP25P42331 645 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 PREPLQ4J6C6 727 aaPredicted RBP21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 FKBP15Q5T1M5 1219 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 KLHL10Q6JEL2 608 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 TTF2Q9UNY4 1162 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 FOXN1O15353 648 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 SRGAP2O75044 1071 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 PDIA3P30101 505 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 FMR1Q06787 632 aaKnown RBP eCLIP21.5■■□□□ 1.034e-6■■□□□ 12.4
SMARCD1-201ENST00000381513 SPECC1Q5M775 1068 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 SND1Q7KZF4 910 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 TEX13AQ9BXU3 409 aaPredicted RBP21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 MYO1BO43795 1136 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 RPSAP08865 295 aaKnown RBP21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 CCDC40Q4G0X9 1142 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 PANX2Q96RD6 677 aa21.5■■□□□ 1.03
SMARCD1-201ENST00000381513 AGPSO00116 658 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 A1BGP04217 495 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 FDPSP14324 419 aaKnown RBP21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 BEND3Q5T5X7 828 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 NUTM2AQ8IVF1 878 aaPredicted RBP21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 TBC1D22AQ8WUA7 517 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 SLF1Q9BQI6 1058 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 PTPRMP28827 1452 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 KIF20BQ96Q89 1820 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 HMGB1P09429 215 aaKnown RBP21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 FNTAP49354 379 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 MICALCLQ6ZW33 695 aa21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 FOXP4Q8IVH2 680 aaPredicted RBP21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 EDC4Q6P2E9 1401 aaKnown RBP21.49■■□□□ 1.03
SMARCD1-201ENST00000381513 CASP14P31944 242 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 METTL16Q86W50 562 aaKnown RBP21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 CALR3Q96L12 384 aaKnown RBP21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 MROH1Q8NDA8 1641 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 SASH1O94885 1247 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 MYBL2P10244 700 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 EZRP15311 586 aaKnown RBP21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 GBP2P32456 591 aaPredicted RBP21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 PDE6BP35913 854 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 AMOTL1Q8IY63 956 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 MMS19Q96T76 1030 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 PPARDQ03181 441 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 USPL1Q5W0Q7 1092 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 POGZQ7Z3K3 1410 aa21.48■■□□□ 1.03
SMARCD1-201ENST00000381513 STX17P56962 302 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 KCTD16Q68DU8 428 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 RASGRP2Q7LDG7 609 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 JMYQ8N9B5 988 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 KLHDC4Q8TBB5 520 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 CCDC114Q96M63 670 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 NAA15Q9BXJ9 866 aaKnown RBP21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 CHPF2Q9P2E5 772 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 GRIN2DO15399 1336 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 IRF6O14896 467 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 FSBPO95073 299 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 BMP6P22004 513 aa21.47■■□□□ 1.03
SMARCD1-201ENST00000381513 KIF28PB7ZC32 967 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 ERCC3P19447 782 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 GCKP35557 465 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 PEX19P40855 299 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 IFT88Q13099 833 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 SF3B2Q13435 895 aaKnown RBP21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 SHC4Q6S5L8 630 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 BRAPQ7Z569 592 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 GPHNQ9NQX3 736 aaPredicted RBP21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 SNRKQ9NRH2 765 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 KIF3CO14782 793 aa21.46■■□□□ 1.03
SMARCD1-201ENST00000381513 CRYMQ14894 314 aa21.45■■□□□ 1.02
SMARCD1-201ENST00000381513 NUDT16Q96DE0 195 aaKnown RBP21.45■■□□□ 1.02
SMARCD1-201ENST00000381513 KCNH3Q9ULD8 1083 aa21.45■■□□□ 1.02
SMARCD1-201ENST00000381513 FRMPD1Q5SYB0 1578 aa21.45■■□□□ 1.02
SMARCD1-201ENST00000381513 ZC3H4Q9UPT8 1303 aaKnown RBP21.45■■□□□ 1.02
SMARCD1-201ENST00000381513 SLC39A14Q15043 492 aa21.45■■□□□ 1.02
SMARCD1-201ENST00000381513 DDX46Q7L014 1031 aaKnown RBP21.45■■□□□ 1.02
SMARCD1-201ENST00000381513 TRIM10Q9UDY6 481 aa21.45■■□□□ 1.02
SMARCD1-201ENST00000381513 PDHBP11177 359 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms