RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.5■■□□□ 1.35
CLN5-201ENST00000377453 OGFRQ9NZT2 677 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 IMPACTQ9P2X3 320 aa23.5■■□□□ 1.35
CLN5-201ENST00000377453 DDX41Q9UJV9 622 aaKnown RBP23.5■■□□□ 1.35
CLN5-201ENST00000377453 STRCQ7RTU9 1775 aa23.49■■□□□ 1.35
CLN5-201ENST00000377453 TCRBV5S4A2TA0A5A2 114 aa23.49■■□□□ 1.35
CLN5-201ENST00000377453 FANCGO15287 622 aa23.49■■□□□ 1.35
CLN5-201ENST00000377453 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
CLN5-201ENST00000377453 PCDHA5Q9Y5H7 936 aa23.49■■□□□ 1.35
CLN5-201ENST00000377453 IFIT3O14879 490 aaKnown RBP23.49■■□□□ 1.35
CLN5-201ENST00000377453 PDE8BO95263 885 aa23.49■■□□□ 1.35
CLN5-201ENST00000377453 AKAP11Q9UKA4 1901 aa23.48■■□□□ 1.35
CLN5-201ENST00000377453 SLU7O95391 586 aaKnown RBP23.48■■□□□ 1.35
CLN5-201ENST00000377453 HOMER1Q86YM7 354 aa23.48■■□□□ 1.35
CLN5-201ENST00000377453 CCDC150Q8NCX0 1101 aa23.48■■□□□ 1.35
CLN5-201ENST00000377453 PRR29P0C7W0 189 aa23.48■■□□□ 1.35
CLN5-201ENST00000377453 TICAM2Q86XR7 235 aa23.48■■□□□ 1.35
CLN5-201ENST00000377453 TRMT44Q8IYL2 757 aaKnown RBP23.48■■□□□ 1.35
CLN5-201ENST00000377453 TUBE1Q9UJT0 475 aa23.48■■□□□ 1.35
CLN5-201ENST00000377453 IQSEC3Q9UPP2 1182 aaPredicted RBP23.48■■□□□ 1.35
CLN5-201ENST00000377453 A0A0G2JS52 829 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 PDILTQ8N807 584 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 CNNM3Q8NE01 707 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 TPM4P67936 248 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 RESP18Q5W5W9 173 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 MIGA1Q8NAN2 632 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 FEZ1Q99689 392 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 INTS13Q9NVM9 706 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 DNAI1Q9UI46 699 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 FBXO3Q9UK99 471 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 KCNH3Q9ULD8 1083 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 DCCP43146 1447 aa23.47■■□□□ 1.35
CLN5-201ENST00000377453 NR5A1Q13285 461 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 IFNL3Q8IZI9 196 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 ERO1AQ96HE7 468 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 UTP14AQ9BVJ6 771 aaKnown RBP23.46■■□□□ 1.35
CLN5-201ENST00000377453 NAPBQ9H115 298 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 TOGARAM1Q9Y4F4 1720 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 STARD3NLO95772 234 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 MYL5Q02045 173 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 RASGRF1Q13972 1273 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 UBE3CQ15386 1083 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 UTP14CQ5TAP6 766 aaKnown RBP23.46■■□□□ 1.35
CLN5-201ENST00000377453 ZNF397Q8NF99 534 aaPredicted RBP23.46■■□□□ 1.35
CLN5-201ENST00000377453 SEC31BQ9NQW1 1179 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 SLC12A7Q9Y666 1083 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 TOB1P50616 345 aaPredicted RBP23.46■■□□□ 1.35
CLN5-201ENST00000377453 TRIM29Q14134 588 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 ZNF446Q9NWS9 450 aa23.46■■□□□ 1.35
CLN5-201ENST00000377453 hCG_1642624A0A1W2PR95 340 aa23.45■■□□□ 1.34
CLN5-201ENST00000377453 USP49Q70CQ1 688 aa23.45■■□□□ 1.34
CLN5-201ENST00000377453 CDKL5O76039 1030 aa23.45■■□□□ 1.34
CLN5-201ENST00000377453 KRBA2Q6ZNG9 492 aa23.45■■□□□ 1.34
CLN5-201ENST00000377453 LCORLQ8N3X6 602 aa23.45■■□□□ 1.34
CLN5-201ENST00000377453 OXER1Q8TDS5 423 aa23.45■■□□□ 1.34
CLN5-201ENST00000377453 PAPPAQ13219 1627 aa23.45■■□□□ 1.34
CLN5-201ENST00000377453 PPP6R2O75170 966 aa23.44■■□□□ 1.34
CLN5-201ENST00000377453 FMR1Q06787 632 aaKnown RBP eCLIP23.44■■□□□ 1.34
CLN5-201ENST00000377453 CPLX2Q6PUV4 134 aaKnown RBP23.44■■□□□ 1.34
CLN5-201ENST00000377453 WDR19Q8NEZ3 1342 aa23.44■■□□□ 1.34
CLN5-201ENST00000377453 FAM205CA6NFA0 338 aa23.44■■□□□ 1.34
CLN5-201ENST00000377453 IKBKBO14920 756 aa23.44■■□□□ 1.34
CLN5-201ENST00000377453 SSRP1Q08945 709 aaKnown RBP23.44■■□□□ 1.34
CLN5-201ENST00000377453 SPATA5Q8NB90 893 aa23.44■■□□□ 1.34
CLN5-201ENST00000377453 NUP133Q8WUM0 1156 aa23.44■■□□□ 1.34
CLN5-201ENST00000377453 TTF1Q15361 905 aaPredicted RBP23.43■■□□□ 1.34
CLN5-201ENST00000377453 DIS3L2Q8IYB7 885 aaKnown RBP23.43■■□□□ 1.34
CLN5-201ENST00000377453 EPC1Q9H2F5 836 aa23.43■■□□□ 1.34
CLN5-201ENST00000377453 PCDHB6Q9Y5E3 794 aa23.43■■□□□ 1.34
CLN5-201ENST00000377453 MYH7P12883 1935 aa23.43■■□□□ 1.34
CLN5-201ENST00000377453 DDX60Q8IY21 1712 aaKnown RBP23.43■■□□□ 1.34
CLN5-201ENST00000377453 SHANK3Q9BYB0 1731 aa23.43■■□□□ 1.34
CLN5-201ENST00000377453 WTIPA6NIX2 430 aaPredicted RBP23.42■■□□□ 1.34
CLN5-201ENST00000377453 GSG1L2A8MUP6 293 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 BCAMP50895 628 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 GTPBP4Q9BZE4 634 aaKnown RBP23.42■■□□□ 1.34
CLN5-201ENST00000377453 SERTAD1Q9UHV2 236 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 CDHR2Q9BYE9 1310 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 POLR2DO15514 142 aaKnown RBP23.42■■□□□ 1.34
CLN5-201ENST00000377453 CYP19A1P11511 503 aaPredicted RBP23.42■■□□□ 1.34
CLN5-201ENST00000377453 ARID4AP29374 1257 aaPredicted RBP23.42■■□□□ 1.34
CLN5-201ENST00000377453 CASP1P29466 404 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 JMYQ8N9B5 988 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 TMEM87BQ96K49 555 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 TIGD1Q96MW7 591 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 KCND1Q9NSA2 647 aa23.42■■□□□ 1.34
CLN5-201ENST00000377453 NOSTRINQ8IVI9 506 aa23.41■■□□□ 1.34
CLN5-201ENST00000377453 MAN1B1Q9UKM7 699 aa23.41■■□□□ 1.34
CLN5-201ENST00000377453 ABCC12Q96J65 1359 aa23.41■■□□□ 1.34
CLN5-201ENST00000377453 PSDA5PKW4 1024 aaPredicted RBP23.41■■□□□ 1.34
CLN5-201ENST00000377453 TOP1P11387 765 aaKnown RBP23.41■■□□□ 1.34
CLN5-201ENST00000377453 ADKP55263 362 aaKnown RBP23.41■■□□□ 1.34
CLN5-201ENST00000377453 OLFM4Q6UX06 510 aa23.41■■□□□ 1.34
CLN5-201ENST00000377453 MORC2Q9Y6X9 1032 aaPredicted RBP23.41■■□□□ 1.34
CLN5-201ENST00000377453 PATL2C9JE40 543 aaKnown RBP23.4■■□□□ 1.34
CLN5-201ENST00000377453 CUTAO60888 179 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 TDO2P48775 406 aa23.4■■□□□ 1.34
CLN5-201ENST00000377453 PUM3Q15397 648 aaKnown RBP23.4■■□□□ 1.34
CLN5-201ENST00000377453 DZIP3Q86Y13 1208 aaKnown RBP23.4■■□□□ 1.34
CLN5-201ENST00000377453 VSTM4Q8IW00 320 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms