RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ZMYM6O95789 1325 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 SCN11AQ9UI33 1791 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 SOWAHDA6NJG2 315 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 PRR29P0C7W0 189 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 BRD3Q15059 726 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 ANKZF1Q9H8Y5 726 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 PDE11AQ9HCR9 933 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 UBE2Q2LH0YL09 131 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 ADORA1P30542 326 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 METAP2P50579 478 aaKnown RBP eCLIP18.9■□□□□ 0.62
TRIM39-201ENST00000376656 MCM6Q14566 821 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 TTC5Q8N0Z6 440 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 MED15Q96RN5 788 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 RASSF4Q9H2L5 321 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 SENP2Q9HC62 589 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 SLIT3O75094 1523 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.62
TRIM39-201ENST00000376656 SCARF1Q14162 830 aa18.89■□□□□ 0.62
TRIM39-201ENST00000376656 SRGAP1Q7Z6B7 1085 aa18.89■□□□□ 0.62
TRIM39-201ENST00000376656 ZFP91Q96JP5 570 aaPredicted RBP18.89■□□□□ 0.62
TRIM39-201ENST00000376656 SAMSN1Q9NSI8 373 aaKnown RBP18.89■□□□□ 0.62
TRIM39-201ENST00000376656 PHKG2P15735 406 aa18.89■□□□□ 0.61
TRIM39-201ENST00000376656 TEX13AQ9BXU3 409 aaPredicted RBP18.89■□□□□ 0.61
TRIM39-201ENST00000376656 NBPF3Q9H094 633 aa18.89■□□□□ 0.61
TRIM39-201ENST00000376656 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.89■□□□□ 0.61
TRIM39-201ENST00000376656 RAI14Q9P0K7 980 aa18.89■□□□□ 0.61
TRIM39-201ENST00000376656 VPS18Q9P253 973 aa18.89■□□□□ 0.61
TRIM39-201ENST00000376656 SPEF2Q9C093 1822 aa18.89■□□□□ 0.61
TRIM39-201ENST00000376656 TTC39AQ5SRH9 613 aa18.89■□□□□ 0.61
TRIM39-201ENST00000376656 BEND6Q5SZJ8 279 aaPredicted RBP18.89■□□□□ 0.61
TRIM39-201ENST00000376656 CYB5R4Q7L1T6 521 aa18.89■□□□□ 0.61
TRIM39-201ENST00000376656 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
TRIM39-201ENST00000376656 GRIN1Q05586 938 aa18.88■□□□□ 0.61
TRIM39-201ENST00000376656 GRAMD1CQ8IYS0 662 aa18.88■□□□□ 0.61
TRIM39-201ENST00000376656 PNKPQ96T60 521 aa18.88■□□□□ 0.61
TRIM39-201ENST00000376656 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRIM39-201ENST00000376656 CCDC175P0C221 793 aa18.88■□□□□ 0.61
TRIM39-201ENST00000376656 POSTNQ15063 836 aa18.88■□□□□ 0.61
TRIM39-201ENST00000376656 RAPGEF4Q8WZA2 1011 aa18.88■□□□□ 0.61
TRIM39-201ENST00000376656 ANGEL1Q9UNK9 670 aaKnown RBP18.88■□□□□ 0.61
TRIM39-201ENST00000376656 ACTN2P35609 894 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 RAD9BQ6WBX8 426 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 MICU3Q86XE3 530 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 ENOX1Q8TC92 643 aaKnown RBP18.87■□□□□ 0.61
TRIM39-201ENST00000376656 SUGCTQ9HAC7 445 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 RSPH14Q9UHP6 348 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 LMTK3Q96Q04 1460 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 RGPD5Q99666 1765 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 GPAA1O43292 621 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 N4BP1O75113 896 aaKnown RBP18.87■□□□□ 0.61
TRIM39-201ENST00000376656 PI16Q6UXB8 463 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRIM39-201ENST00000376656 APPBP2Q92624 585 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 ATG3Q9NT62 314 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 TFRCP02786 760 aaKnown RBP18.87■□□□□ 0.61
TRIM39-201ENST00000376656 ZAP70P43403 619 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 NR1I3Q14994 352 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 SRLQ86TD4 932 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 STK11IPQ8N1F8 1099 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 KRI1Q8N9T8 703 aaKnown RBP18.87■□□□□ 0.61
TRIM39-201ENST00000376656 SERTAD1Q9UHV2 236 aa18.87■□□□□ 0.61
TRIM39-201ENST00000376656 WDR19Q8NEZ3 1342 aa18.86■□□□□ 0.61
TRIM39-201ENST00000376656 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
TRIM39-201ENST00000376656 TEX33O43247 280 aa18.86■□□□□ 0.61
TRIM39-201ENST00000376656 RANBP6O60518 1105 aaKnown RBP18.86■□□□□ 0.61
TRIM39-201ENST00000376656 TBC1D10CQ8IV04 446 aa18.86■□□□□ 0.61
TRIM39-201ENST00000376656 CWC25Q9NXE8 425 aaPredicted RBP18.86■□□□□ 0.61
TRIM39-201ENST00000376656 ADGRG1Q9Y653 693 aa18.86■□□□□ 0.61
TRIM39-201ENST00000376656 AKR1B15C9JRZ8 316 aaPredicted RBP18.86■□□□□ 0.61
TRIM39-201ENST00000376656 ZFYP08048 801 aaPredicted RBP18.86■□□□□ 0.61
TRIM39-201ENST00000376656 WWC2Q6AWC2 1192 aa18.86■□□□□ 0.61
TRIM39-201ENST00000376656 APOA5Q6Q788 366 aa18.86■□□□□ 0.61
TRIM39-201ENST00000376656 RRP15Q9Y3B9 282 aaKnown RBP18.86■□□□□ 0.61
TRIM39-201ENST00000376656 SH2B2O14492 632 aaPredicted RBP18.85■□□□□ 0.61
TRIM39-201ENST00000376656 CDKL5O76039 1030 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 MORC3Q14149 939 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 TTLL7Q6ZT98 887 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 MLKLQ8NB16 471 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 HNRNPLLQ8WVV9 542 aaKnown RBP18.85■□□□□ 0.61
TRIM39-201ENST00000376656 XAGE2Q96GT9 111 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 MYL10Q9BUA6 226 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 CEP126Q9P2H0 1117 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 CDC23Q9UJX2 597 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 POLR2DO15514 142 aaKnown RBP18.85■□□□□ 0.61
TRIM39-201ENST00000376656 TRDNQ13061 729 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 NUTM2AQ8IVF1 878 aaPredicted RBP18.85■□□□□ 0.61
TRIM39-201ENST00000376656 RGS22Q8NE09 1264 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 CPLX3Q8WVH0 158 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 ABCB6Q9NP58 842 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 TRIM29Q14134 588 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 SLC9C2Q5TAH2 1124 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 HDXQ7Z353 690 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 IQUBQ8NA54 791 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 ORAI2Q96SN7 254 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 RAB21Q9UL25 225 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 TMEM94Q12767 1356 aa18.85■□□□□ 0.61
TRIM39-201ENST00000376656 NBPF26B4DH59 902 aa18.84■□□□□ 0.61
TRIM39-201ENST00000376656 IARSP41252 1262 aaKnown RBP18.84■□□□□ 0.61
TRIM39-201ENST00000376656 TNNT3P45378 269 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms