RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 SIPA1L1O43166 1804 aa25.88■■□□□ 1.73
TMEM54-202ENST00000373463 NPM3O75607 178 aaKnown RBP25.88■■□□□ 1.73
TMEM54-202ENST00000373463 DYNLL1P63167 89 aaKnown RBP25.88■■□□□ 1.73
TMEM54-202ENST00000373463 MAP3K9P80192 1104 aa25.88■■□□□ 1.73
TMEM54-202ENST00000373463 CNKSR2Q8WXI2 1034 aa25.88■■□□□ 1.73
TMEM54-202ENST00000373463 HAUS7Q99871 368 aa25.88■■□□□ 1.73
TMEM54-202ENST00000373463 MAP4K4O95819 1239 aaPredicted RBP25.87■■□□□ 1.73
TMEM54-202ENST00000373463 CTCFP49711 727 aaPredicted RBP25.87■■□□□ 1.73
TMEM54-202ENST00000373463 COL13A1Q5TAT6 717 aaPredicted RBP25.87■■□□□ 1.73
TMEM54-202ENST00000373463 OTUD7AQ8TE49 926 aaPredicted RBP25.87■■□□□ 1.73
TMEM54-202ENST00000373463 ELP3Q9H9T3 547 aa25.87■■□□□ 1.73
TMEM54-202ENST00000373463 ZNF112Q9UJU3 913 aa25.87■■□□□ 1.73
TMEM54-202ENST00000373463 SNCAIPQ9Y6H5 919 aa25.87■■□□□ 1.73
TMEM54-202ENST00000373463 COL2A1P02458 1487 aaPredicted RBP25.86■■□□□ 1.73
TMEM54-202ENST00000373463 LBX1P52954 281 aa25.86■■□□□ 1.73
TMEM54-202ENST00000373463 MAP3K12Q12852 859 aa25.86■■□□□ 1.73
TMEM54-202ENST00000373463 AAMPQ13685 434 aa25.86■■□□□ 1.73
TMEM54-202ENST00000373463 TSHZ3Q63HK5 1081 aa25.86■■□□□ 1.73
TMEM54-202ENST00000373463 TEX11Q8IYF3 940 aa25.86■■□□□ 1.73
TMEM54-202ENST00000373463 ZKSCAN4Q969J2 545 aaPredicted RBP25.86■■□□□ 1.73
TMEM54-202ENST00000373463 WRNIP1Q96S55 665 aa25.86■■□□□ 1.73
TMEM54-202ENST00000373463 INPP5BP32019 993 aa25.85■■□□□ 1.73
TMEM54-202ENST00000373463 MAP3K10Q02779 954 aa25.85■■□□□ 1.73
TMEM54-202ENST00000373463 DCAF15Q66K64 600 aa25.85■■□□□ 1.73
TMEM54-202ENST00000373463 MIGA1Q8NAN2 632 aa25.85■■□□□ 1.73
TMEM54-202ENST00000373463 HOOK2Q96ED9 719 aa25.85■■□□□ 1.73
TMEM54-202ENST00000373463 ZNF341Q9BYN7 854 aa25.85■■□□□ 1.73
TMEM54-202ENST00000373463 ECHDC1Q9NTX5 307 aa25.85■■□□□ 1.73
TMEM54-202ENST00000373463 PAG1Q9NWQ8 432 aa25.85■■□□□ 1.73
TMEM54-202ENST00000373463 MYH7P12883 1935 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 TCRBV5S4A2TA0A5A2 114 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 BAG3O95817 575 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 CHGBP05060 677 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 ZBTB48P10074 688 aaPredicted RBP25.84■■□□□ 1.73
TMEM54-202ENST00000373463 PDE6AP16499 860 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 TM4SF4P48230 202 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 TTF1Q15361 905 aaPredicted RBP25.84■■□□□ 1.73
TMEM54-202ENST00000373463 SLFNL1Q499Z3 407 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 OSBPL5Q9H0X9 879 aaPredicted RBP25.84■■□□□ 1.73
TMEM54-202ENST00000373463 RNF186Q9NXI6 227 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 SALL3Q9BXA9 1300 aa25.84■■□□□ 1.73
TMEM54-202ENST00000373463 OPTNQ96CV9 577 aa25.83■■□□□ 1.73
TMEM54-202ENST00000373463 BEGAINQ9BUH8 593 aa25.83■■□□□ 1.73
TMEM54-202ENST00000373463 PHF20L1A8MW92 1017 aa25.82■■□□□ 1.72
TMEM54-202ENST00000373463 IRX6P78412 446 aaPredicted RBP25.82■■□□□ 1.72
TMEM54-202ENST00000373463 SLC9C2Q5TAH2 1124 aa25.82■■□□□ 1.72
TMEM54-202ENST00000373463 ZSCAN29Q8IWY8 852 aaPredicted RBP25.82■■□□□ 1.72
TMEM54-202ENST00000373463 TGFBRAP1Q8WUH2 860 aa25.82■■□□□ 1.72
TMEM54-202ENST00000373463 RIOK1Q9BRS2 568 aaKnown RBP25.82■■□□□ 1.72
TMEM54-202ENST00000373463 NOL10Q9BSC4 688 aaKnown RBP25.82■■□□□ 1.72
TMEM54-202ENST00000373463 SPDYE5A6NIY4 337 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 CA12O43570 354 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 IGHDP01880 384 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 PLCG2P16885 1265 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 MAPKAPK5Q8IW41 473 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 REM2Q8IYK8 340 aaPredicted RBP25.81■■□□□ 1.72
TMEM54-202ENST00000373463 PRDM10Q9NQV6 1147 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 CSADQ9Y600 493 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 FLT1P17948 1338 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 ZNF532Q9HCE3 1301 aa25.81■■□□□ 1.72
TMEM54-202ENST00000373463 DDX60LQ5H9U9 1706 aaKnown RBP25.8■■□□□ 1.72
TMEM54-202ENST00000373463 TRPA1O75762 1119 aa25.8■■□□□ 1.72
TMEM54-202ENST00000373463 TMED8Q6PL24 325 aaPredicted RBP25.8■■□□□ 1.72
TMEM54-202ENST00000373463 FAM196BA6NMK8 535 aa25.79■■□□□ 1.72
TMEM54-202ENST00000373463 SMC5Q8IY18 1101 aa25.79■■□□□ 1.72
TMEM54-202ENST00000373463 PI4K2BQ8TCG2 481 aa25.79■■□□□ 1.72
TMEM54-202ENST00000373463 GCC1Q96CN9 775 aa25.79■■□□□ 1.72
TMEM54-202ENST00000373463 MS4A4AQ96JQ5 239 aa25.79■■□□□ 1.72
TMEM54-202ENST00000373463 SAGE1Q9NXZ1 904 aa25.79■■□□□ 1.72
TMEM54-202ENST00000373463 MYH1P12882 1939 aa25.78■■□□□ 1.72
TMEM54-202ENST00000373463 MANSC4A6NHS7 340 aaPredicted RBP25.78■■□□□ 1.72
TMEM54-202ENST00000373463 ADD2P35612 726 aa25.78■■□□□ 1.72
TMEM54-202ENST00000373463 NOL9Q5SY16 702 aaKnown RBP25.78■■□□□ 1.72
TMEM54-202ENST00000373463 ANKRD45Q5TZF3 282 aa25.78■■□□□ 1.72
TMEM54-202ENST00000373463 OTUD5Q96G74 571 aa25.78■■□□□ 1.72
TMEM54-202ENST00000373463 DOCK1Q14185 1865 aa25.78■■□□□ 1.72
TMEM54-202ENST00000373463 CASP8AP2Q9UKL3 1982 aa25.77■■□□□ 1.72
TMEM54-202ENST00000373463 IGF2BP3O00425 579 aaKnown RBP eCLIP25.77■■□□□ 1.72
TMEM54-202ENST00000373463 SREBF2Q12772 1141 aa25.77■■□□□ 1.72
TMEM54-202ENST00000373463 ERO1BQ86YB8 467 aa25.77■■□□□ 1.72
TMEM54-202ENST00000373463 PTPN18Q99952 460 aa25.77■■□□□ 1.72
TMEM54-202ENST00000373463 TESPA1A2RU30 521 aaPredicted RBP25.76■■□□□ 1.71
TMEM54-202ENST00000373463 TBC1D12O60347 775 aa25.76■■□□□ 1.71
TMEM54-202ENST00000373463 RRP1BQ14684 758 aaKnown RBP25.76■■□□□ 1.71
TMEM54-202ENST00000373463 PALD1Q9ULE6 856 aa25.76■■□□□ 1.71
TMEM54-202ENST00000373463 TTC41PQ6P2S7 1318 aa25.76■■□□□ 1.71
TMEM54-202ENST00000373463 PHIPQ8WWQ0 1821 aa25.76■■□□□ 1.71
TMEM54-202ENST00000373463 IFNL1Q8IU54 200 aa25.75■■□□□ 1.71
TMEM54-202ENST00000373463 LCORLQ8N3X6 602 aa25.75■■□□□ 1.71
TMEM54-202ENST00000373463 GPATCH3Q96I76 525 aa25.75■■□□□ 1.71
TMEM54-202ENST00000373463 R3HDMLQ9H3Y0 253 aa25.75■■□□□ 1.71
TMEM54-202ENST00000373463 DNAJC18Q9H819 358 aa25.75■■□□□ 1.71
TMEM54-202ENST00000373463 SAP30BPQ9UHR5 308 aaKnown RBP25.75■■□□□ 1.71
TMEM54-202ENST00000373463 NAV1Q8NEY1 1877 aa25.74■■□□□ 1.71
TMEM54-202ENST00000373463 MAGEB6P1A0A0J9YX57 407 aa25.74■■□□□ 1.71
TMEM54-202ENST00000373463 IRF6O14896 467 aa25.74■■□□□ 1.71
TMEM54-202ENST00000373463 MX1P20591 662 aa25.74■■□□□ 1.71
TMEM54-202ENST00000373463 CERS3Q8IU89 383 aa25.74■■□□□ 1.71
TMEM54-202ENST00000373463 BRI3BPQ8WY22 251 aa25.74■■□□□ 1.71
TMEM54-202ENST00000373463 RWDD1Q9H446 243 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 288.2 ms