RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 DDX4Q9NQI0 724 aaKnown RBP28.63■■■□□ 2.17
CITED4-201ENST00000372638 PAG1Q9NWQ8 432 aa28.63■■■□□ 2.17
CITED4-201ENST00000372638 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.63■■■□□ 2.17
CITED4-201ENST00000372638 DOCK2Q92608 1830 aa28.62■■■□□ 2.17
CITED4-201ENST00000372638 MIGA2Q7L4E1 593 aa28.62■■■□□ 2.17
CITED4-201ENST00000372638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.62■■■□□ 2.172e-7■■■■■ 33.8
CITED4-201ENST00000372638 SH3RF3Q8TEJ3 882 aaPredicted RBP28.62■■■□□ 2.17
CITED4-201ENST00000372638 ZNF341Q9BYN7 854 aa28.62■■■□□ 2.17
CITED4-201ENST00000372638 FOXN1O15353 648 aa28.61■■■□□ 2.17
CITED4-201ENST00000372638 ANKRD45Q5TZF3 282 aa28.61■■■□□ 2.17
CITED4-201ENST00000372638 SPRYD7Q5W111 196 aa28.61■■■□□ 2.17
CITED4-201ENST00000372638 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.61■■■□□ 2.17
CITED4-201ENST00000372638 SLC9C2Q5TAH2 1124 aa28.6■■■□□ 2.17
CITED4-201ENST00000372638 CERS3Q8IU89 383 aa28.6■■■□□ 2.17
CITED4-201ENST00000372638 EDC3Q96F86 508 aaKnown RBP28.6■■■□□ 2.17
CITED4-201ENST00000372638 CSRNP1Q96S65 589 aa28.6■■■□□ 2.17
CITED4-201ENST00000372638 CSADQ9Y600 493 aa28.6■■■□□ 2.17
CITED4-201ENST00000372638 CTCFP49711 727 aaPredicted RBP28.59■■■□□ 2.17
CITED4-201ENST00000372638 MKRN3Q13064 507 aaKnown RBP28.59■■■□□ 2.17
CITED4-201ENST00000372638 SH3BP5LQ7L8J4 393 aa28.59■■■□□ 2.17
CITED4-201ENST00000372638 WRNIP1Q96S55 665 aa28.59■■■□□ 2.17
CITED4-201ENST00000372638 DDTLA6NHG4 134 aaPredicted RBP28.58■■■□□ 2.17
CITED4-201ENST00000372638 CA12O43570 354 aa28.58■■■□□ 2.17
CITED4-201ENST00000372638 ZBTB48P10074 688 aaPredicted RBP28.58■■■□□ 2.17
CITED4-201ENST00000372638 WNK4Q96J92 1243 aa28.58■■■□□ 2.17
CITED4-201ENST00000372638 ELP3Q9H9T3 547 aa28.58■■■□□ 2.17
CITED4-201ENST00000372638 PDE6AP16499 860 aa28.57■■■□□ 2.16
CITED4-201ENST00000372638 DYNLL1P63167 89 aaKnown RBP28.57■■■□□ 2.16
CITED4-201ENST00000372638 VGLL4Q14135 290 aa28.57■■■□□ 2.16
CITED4-201ENST00000372638 MIGA1Q8NAN2 632 aa28.57■■■□□ 2.16
CITED4-201ENST00000372638 OSBPL5Q9H0X9 879 aaPredicted RBP28.57■■■□□ 2.16
CITED4-201ENST00000372638 TTC41PQ6P2S7 1318 aa28.57■■■□□ 2.16
CITED4-201ENST00000372638 IRX6P78412 446 aaPredicted RBP28.56■■■□□ 2.16
CITED4-201ENST00000372638 TGFBRAP1Q8WUH2 860 aa28.56■■■□□ 2.16
CITED4-201ENST00000372638 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.56■■■□□ 2.16
CITED4-201ENST00000372638 ZNF112Q9UJU3 913 aa28.56■■■□□ 2.16
CITED4-201ENST00000372638 OTOFQ9HC10 1997 aa28.56■■■□□ 2.16
CITED4-201ENST00000372638 ATRNL1Q5VV63 1379 aa28.55■■■□□ 2.16
CITED4-201ENST00000372638 PCNTO95613 3336 aa28.55■■■□□ 2.16
CITED4-201ENST00000372638 SMC5Q8IY18 1101 aa28.55■■■□□ 2.16
CITED4-201ENST00000372638 ZNF532Q9HCE3 1301 aa28.55■■■□□ 2.16
CITED4-201ENST00000372638 ERC2O15083 957 aa28.54■■■□□ 2.16
CITED4-201ENST00000372638 MAP3K10Q02779 954 aa28.54■■■□□ 2.16
CITED4-201ENST00000372638 TSHZ3Q63HK5 1081 aa28.54■■■□□ 2.16
CITED4-201ENST00000372638 ZKSCAN4Q969J2 545 aaPredicted RBP28.54■■■□□ 2.16
CITED4-201ENST00000372638 COL2A1P02458 1487 aaPredicted RBP28.54■■■□□ 2.16
CITED4-201ENST00000372638 MANSC4A6NHS7 340 aaPredicted RBP28.53■■■□□ 2.16
CITED4-201ENST00000372638 IGHDP01880 384 aa28.53■■■□□ 2.16
CITED4-201ENST00000372638 TM4SF4P48230 202 aa28.53■■■□□ 2.16
CITED4-201ENST00000372638 SREBF2Q12772 1141 aa28.53■■■□□ 2.16
CITED4-201ENST00000372638 MAPKAPK5Q8IW41 473 aa28.53■■■□□ 2.16
CITED4-201ENST00000372638 OTUD7AQ8TE49 926 aaPredicted RBP28.53■■■□□ 2.16
CITED4-201ENST00000372638 OPTNQ96CV9 577 aa28.53■■■□□ 2.16
CITED4-201ENST00000372638 MAGEB6P1A0A0J9YX57 407 aa28.52■■■□□ 2.16
CITED4-201ENST00000372638 MX1P20591 662 aa28.52■■■□□ 2.16
CITED4-201ENST00000372638 INPP5BP32019 993 aa28.52■■■□□ 2.16
CITED4-201ENST00000372638 INHBEP58166 350 aa28.52■■■□□ 2.16
CITED4-201ENST00000372638 ZSCAN25Q6NSZ9 544 aa28.52■■■□□ 2.16
CITED4-201ENST00000372638 DHX36Q9H2U1 1008 aaKnown RBP28.52■■■□□ 2.16
CITED4-201ENST00000372638 SNCAIPQ9Y6H5 919 aa28.52■■■□□ 2.16
CITED4-201ENST00000372638 TCRBV5S4A2TA0A5A2 114 aa28.51■■■□□ 2.15
CITED4-201ENST00000372638 HSPA8P11142 646 aaKnown RBP28.51■■■□□ 2.15
CITED4-201ENST00000372638 ADD2P35612 726 aa28.51■■■□□ 2.15
CITED4-201ENST00000372638 GJA5P36382 358 aa28.51■■■□□ 2.15
CITED4-201ENST00000372638 ERO1BQ86YB8 467 aa28.51■■■□□ 2.15
CITED4-201ENST00000372638 RIOK1Q9BRS2 568 aaKnown RBP28.51■■■□□ 2.15
CITED4-201ENST00000372638 FLT1P17948 1338 aa28.51■■■□□ 2.15
CITED4-201ENST00000372638 CDK5RAP2Q96SN8 1893 aa28.51■■■□□ 2.15
CITED4-201ENST00000372638 SPDYE5A6NIY4 337 aa28.5■■■□□ 2.15
CITED4-201ENST00000372638 TBC1D12O60347 775 aa28.5■■■□□ 2.15
CITED4-201ENST00000372638 GLRX3O76003 335 aaKnown RBP28.5■■■□□ 2.15
CITED4-201ENST00000372638 USP5P45974 858 aa28.5■■■□□ 2.15
CITED4-201ENST00000372638 LBX1P52954 281 aa28.5■■■□□ 2.15
CITED4-201ENST00000372638 RNF186Q9NXI6 227 aa28.5■■■□□ 2.15
CITED4-201ENST00000372638 SAGE1Q9NXZ1 904 aa28.5■■■□□ 2.15
CITED4-201ENST00000372638 TRPA1O75762 1119 aa28.49■■■□□ 2.15
CITED4-201ENST00000372638 UBE3CQ15386 1083 aa28.49■■■□□ 2.15
CITED4-201ENST00000372638 PI4K2BQ8TCG2 481 aa28.49■■■□□ 2.15
CITED4-201ENST00000372638 CNKSR2Q8WXI2 1034 aa28.49■■■□□ 2.15
CITED4-201ENST00000372638 PRDM10Q9NQV6 1147 aa28.49■■■□□ 2.15
CITED4-201ENST00000372638 PI4KBQ9UBF8 816 aa28.49■■■□□ 2.15
CITED4-201ENST00000372638 FOCADQ5VW36 1801 aa28.48■■■□□ 2.15
CITED4-201ENST00000372638 PHF20L1A8MW92 1017 aa28.48■■■□□ 2.15
CITED4-201ENST00000372638 NOL9Q5SY16 702 aaKnown RBP28.48■■■□□ 2.15
CITED4-201ENST00000372638 B4GALNT3Q6L9W6 998 aa28.48■■■□□ 2.15
CITED4-201ENST00000372638 KBTBD3Q8NAB2 608 aa28.48■■■□□ 2.15
CITED4-201ENST00000372638 OTUD5Q96G74 571 aa28.48■■■□□ 2.15
CITED4-201ENST00000372638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.48■■■□□ 2.15
CITED4-201ENST00000372638 TSKSQ9UJT2 592 aa28.48■■■□□ 2.15
CITED4-201ENST00000372638 SALL3Q9BXA9 1300 aa28.48■■■□□ 2.15
CITED4-201ENST00000372638 MYH7P12883 1935 aa28.47■■■□□ 2.15
CITED4-201ENST00000372638 SLURP2P0DP57 97 aa28.46■■■□□ 2.15
CITED4-201ENST00000372638 FOXP4Q8IVH2 680 aaPredicted RBP28.46■■■□□ 2.15
CITED4-201ENST00000372638 CRNKL1Q9BZJ0 848 aaKnown RBP28.46■■■□□ 2.15
CITED4-201ENST00000372638 LNPKQ9C0E8 428 aa28.46■■■□□ 2.15
CITED4-201ENST00000372638 STAP2Q9UGK3 403 aa28.46■■■□□ 2.15
CITED4-201ENST00000372638 HERC5Q9UII4 1024 aaKnown RBP28.46■■■□□ 2.15
CITED4-201ENST00000372638 PALD1Q9ULE6 856 aa28.46■■■□□ 2.15
CITED4-201ENST00000372638 CTNND1O60716 968 aaKnown RBP28.45■■■□□ 2.15
CITED4-201ENST00000372638 PPATQ06203 517 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms