RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 KIAA1468Q9P260 1216 aa20.94■□□□□ 0.94
CD40-201ENST00000372276 ANAPC4Q9UJX5 808 aa20.94■□□□□ 0.94
CD40-201ENST00000372276 CLIC4Q9Y696 253 aa20.94■□□□□ 0.94
CD40-201ENST00000372276 SLC4A4Q9Y6R1 1079 aa20.94■□□□□ 0.94
CD40-201ENST00000372276 FMNL1O95466 1100 aaPredicted RBP20.93■□□□□ 0.94
CD40-201ENST00000372276 NT5C2P49902 561 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 CAVIN4Q5BKX8 364 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 ELOA2Q8IYF1 753 aaPredicted RBP20.93■□□□□ 0.94
CD40-201ENST00000372276 SPC24Q8NBT2 197 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 ZNF830Q96NB3 372 aaPredicted RBP20.93■□□□□ 0.94
CD40-201ENST00000372276 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.93■□□□□ 0.94
CD40-201ENST00000372276 ZSWIM5Q9P217 1185 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 COL5A3P25940 1745 aaPredicted RBP20.93■□□□□ 0.94
CD40-201ENST00000372276 NEDD4P46934 1319 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 UQCRHLA0A096LP55 91 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 FAM237AA0A1B0GTK4 181 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 UQCRHP07919 91 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 NTRK3Q16288 839 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 SLC10A5Q5PT55 438 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 ILDR2Q71H61 639 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 ARMT1Q9H993 441 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 EPB41L4AQ9HCS5 686 aaPredicted RBP20.93■□□□□ 0.94
CD40-201ENST00000372276 CLIP2Q9UDT6 1046 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 DENND2AQ9ULE3 1009 aa20.93■□□□□ 0.94
CD40-201ENST00000372276 PDS5AQ29RF7 1337 aaKnown RBP20.92■□□□□ 0.94
CD40-201ENST00000372276 SMTNL1A8MU46 457 aa20.92■□□□□ 0.94
CD40-201ENST00000372276 SLC3A2P08195 630 aaKnown RBP20.92■□□□□ 0.94
CD40-201ENST00000372276 BCAMP50895 628 aa20.92■□□□□ 0.94
CD40-201ENST00000372276 HSP90AA2PQ14568 343 aaPredicted RBP20.92■□□□□ 0.94
CD40-201ENST00000372276 WTAPQ15007 396 aa20.92■□□□□ 0.94
CD40-201ENST00000372276 VPS37DQ86XT2 251 aa20.92■□□□□ 0.94
CD40-201ENST00000372276 MYRIPQ8NFW9 859 aa20.92■□□□□ 0.94
CD40-201ENST00000372276 NYXQ9GZU5 481 aa20.92■□□□□ 0.94
CD40-201ENST00000372276 MYH14Q7Z406 1995 aaKnown RBP20.91■□□□□ 0.94
CD40-201ENST00000372276 CNTNAP4Q9C0A0 1308 aa20.91■□□□□ 0.94
CD40-201ENST00000372276 NDUFA8P51970 172 aa20.91■□□□□ 0.94
CD40-201ENST00000372276 OTUD7BQ6GQQ9 843 aa20.91■□□□□ 0.94
CD40-201ENST00000372276 MICU3Q86XE3 530 aa20.91■□□□□ 0.94
CD40-201ENST00000372276 ACSBG1Q96GR2 724 aa20.91■□□□□ 0.94
CD40-201ENST00000372276 MYO1BO43795 1136 aa20.9■□□□□ 0.94
CD40-201ENST00000372276 CUTAO60888 179 aa20.9■□□□□ 0.94
CD40-201ENST00000372276 ZNF202O95125 648 aa20.9■□□□□ 0.94
CD40-201ENST00000372276 AXDND1Q5T1B0 1012 aaPredicted RBP20.9■□□□□ 0.94
CD40-201ENST00000372276 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
CD40-201ENST00000372276 CCDC186Q7Z3E2 898 aa20.9■□□□□ 0.94
CD40-201ENST00000372276 ESR2Q92731 530 aa20.9■□□□□ 0.94
CD40-201ENST00000372276 KCNF1Q9H3M0 494 aa20.9■□□□□ 0.94
CD40-201ENST00000372276 HOOK1Q9UJC3 728 aaKnown RBP20.9■□□□□ 0.94
CD40-201ENST00000372276 A0A0G2JS52 829 aa20.89■□□□□ 0.94
CD40-201ENST00000372276 MAGEB6P1A0A0J9YX57 407 aa20.89■□□□□ 0.94
CD40-201ENST00000372276 A0A1B0GVL5 298 aa20.89■□□□□ 0.94
CD40-201ENST00000372276 CYP7A1P22680 504 aa20.89■□□□□ 0.94
CD40-201ENST00000372276 CDC27P30260 824 aa20.89■□□□□ 0.94
CD40-201ENST00000372276 NLRP12P59046 1061 aa20.89■□□□□ 0.94
CD40-201ENST00000372276 RTN1Q16799 776 aa20.89■□□□□ 0.94
CD40-201ENST00000372276 IMPACTQ9P2X3 320 aa20.89■□□□□ 0.94
CD40-201ENST00000372276 MORC2Q9Y6X9 1032 aaPredicted RBP20.89■□□□□ 0.94
CD40-201ENST00000372276 FAM177BA6PVY3 158 aa20.89■□□□□ 0.93
CD40-201ENST00000372276 KIF28PB7ZC32 967 aa20.89■□□□□ 0.93
CD40-201ENST00000372276 DEXIO95424 95 aa20.89■□□□□ 0.93
CD40-201ENST00000372276 PTGS1P23219 599 aa20.89■□□□□ 0.93
CD40-201ENST00000372276 GTF2F1P35269 517 aaKnown RBP eCLIP20.89■□□□□ 0.93
CD40-201ENST00000372276 GSDMDP57764 484 aa20.89■□□□□ 0.93
CD40-201ENST00000372276 C11orf57Q6ZUT1 292 aaPredicted RBP20.89■□□□□ 0.93
CD40-201ENST00000372276 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.89■□□□□ 0.93
CD40-201ENST00000372276 BRIP1Q9BX63 1249 aa20.89■□□□□ 0.93
CD40-201ENST00000372276 PDCL3Q9H2J4 239 aa20.89■□□□□ 0.93
CD40-201ENST00000372276 FOXP1Q9H334 677 aaPredicted RBP20.89■□□□□ 0.93
CD40-201ENST00000372276 FAM217BQ9NTX9 383 aaPredicted RBP20.89■□□□□ 0.93
CD40-201ENST00000372276 XBP1P17861 261 aa20.88■□□□□ 0.93
CD40-201ENST00000372276 CTDSPL2Q05D32 466 aa20.88■□□□□ 0.93
CD40-201ENST00000372276 PPARAQ07869 468 aa20.88■□□□□ 0.93
CD40-201ENST00000372276 DHX40Q8IX18 779 aaKnown RBP20.88■□□□□ 0.93
CD40-201ENST00000372276 LCORLQ8N3X6 602 aa20.88■□□□□ 0.93
CD40-201ENST00000372276 UBAC1Q9BSL1 405 aa20.88■□□□□ 0.93
CD40-201ENST00000372276 ANKRD2Q9GZV1 360 aa20.88■□□□□ 0.93
CD40-201ENST00000372276 CEP131Q9UPN4 1083 aa20.88■□□□□ 0.93
CD40-201ENST00000372276 SYKP43405 635 aa20.87■□□□□ 0.93
CD40-201ENST00000372276 RILPL1Q5EBL4 403 aa20.87■□□□□ 0.93
CD40-201ENST00000372276 SLC26A6Q9BXS9 759 aa20.87■□□□□ 0.93
CD40-201ENST00000372276 HPSEQ9Y251 543 aa20.87■□□□□ 0.93
CD40-201ENST00000372276 IKBKBO14920 756 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 ONECUT3O60422 494 aaPredicted RBP20.86■□□□□ 0.93
CD40-201ENST00000372276 CALM1P0DP23 149 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 CALM2P0DP24 149 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 CALM3P0DP25 149 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 PFKFB1P16118 471 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 PTPAQ15257 358 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 RAI14Q9P0K7 980 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 PPFIA3O75145 1194 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 RAB11FIP4Q86YS3 637 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 NOSTRINQ8IVI9 506 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 MAP3K14Q99558 947 aa20.86■□□□□ 0.93
CD40-201ENST00000372276 RANBP6O60518 1105 aaKnown RBP20.85■□□□□ 0.93
CD40-201ENST00000372276 MMP1P03956 469 aa20.85■□□□□ 0.93
CD40-201ENST00000372276 GTF2E1P29083 439 aaPredicted RBP20.85■□□□□ 0.93
CD40-201ENST00000372276 RESP18Q5W5W9 173 aa20.85■□□□□ 0.93
CD40-201ENST00000372276 MPNDQ8N594 471 aa20.85■□□□□ 0.93
CD40-201ENST00000372276 PHKBQ93100 1093 aa20.85■□□□□ 0.93
CD40-201ENST00000372276 CCDC34Q96HJ3 373 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms