RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CCDC50Q8IVM0 306 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 DSCC1Q9BVC3 393 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 NOC4LQ9BVI4 516 aaKnown RBP22.1■■□□□ 1.13
LMO4-202ENST00000370544 HAUS3Q68CZ6 603 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 CNNM4Q6P4Q7 775 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 PPP1R14CQ8TAE6 165 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 CFAP74Q9C0B2 1584 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 CHMP2AO43633 222 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 EPB41P11171 864 aaKnown RBP22.1■■□□□ 1.13
LMO4-202ENST00000370544 BAG1Q99933 345 aaPredicted RBP22.1■■□□□ 1.13
LMO4-202ENST00000370544 GLT8D2Q9H1C3 349 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 PPP2R5BQ15173 497 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 FAM173BQ6P4H8 233 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 SYT10Q6XYQ8 523 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.09■■□□□ 1.13
LMO4-202ENST00000370544 IL17REQ8NFR9 667 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 MAGI3Q5TCQ9 1506 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 KCNQ3O43525 872 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 PICK1Q9NRD5 415 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 CTSWP56202 376 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 TSGA10Q9BZW7 698 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.09■■□□□ 1.13
LMO4-202ENST00000370544 V9GYY5 206 aaPredicted RBP22.09■■□□□ 1.13
LMO4-202ENST00000370544 PHKBQ93100 1093 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 CCDC77Q9BR77 488 aa22.09■■□□□ 1.13
LMO4-202ENST00000370544 TXKP42681 527 aa22.08■■□□□ 1.13
LMO4-202ENST00000370544 LRRC45Q96CN5 670 aa22.08■■□□□ 1.13
LMO4-202ENST00000370544 FAM135BQ49AJ0 1406 aa22.08■■□□□ 1.13
LMO4-202ENST00000370544 FMNL3Q8IVF7 1028 aa22.08■■□□□ 1.13
LMO4-202ENST00000370544 H0YIN7 160 aa22.08■■□□□ 1.12
LMO4-202ENST00000370544 POLR2DO15514 142 aaKnown RBP22.08■■□□□ 1.12
LMO4-202ENST00000370544 OPA1O60313 960 aa22.08■■□□□ 1.12
LMO4-202ENST00000370544 LEO1Q8WVC0 666 aaPredicted RBP22.08■■□□□ 1.12
LMO4-202ENST00000370544 E7EWF7 191 aa22.08■■□□□ 1.12
LMO4-202ENST00000370544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.08■■□□□ 1.12
LMO4-202ENST00000370544 ZNF354CQ86Y25 554 aa22.08■■□□□ 1.12
LMO4-202ENST00000370544 MSANTD4Q8NCY6 345 aa22.08■■□□□ 1.12
LMO4-202ENST00000370544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.07■■□□□ 1.121e-6■□□□□ 10.3
LMO4-202ENST00000370544 KRT40Q6A162 431 aa22.07■■□□□ 1.12
LMO4-202ENST00000370544 CEP83Q9Y592 693 aa22.07■■□□□ 1.12
LMO4-202ENST00000370544 ADCY7P51828 1080 aa22.07■■□□□ 1.12
LMO4-202ENST00000370544 TUBB4BP68371 445 aa22.07■■□□□ 1.12
LMO4-202ENST00000370544 NONOQ15233 471 aaKnown RBP eCLIP22.07■■□□□ 1.12
LMO4-202ENST00000370544 MAPKAPK5Q8IW41 473 aa22.07■■□□□ 1.12
LMO4-202ENST00000370544 RBSNQ9H1K0 784 aa22.07■■□□□ 1.12
LMO4-202ENST00000370544 TMOD4Q9NZQ9 345 aa22.07■■□□□ 1.12
LMO4-202ENST00000370544 CDC37L1Q7L3B6 337 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 KRT25Q7Z3Z0 450 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 IQCGQ9H095 443 aaKnown RBP22.06■■□□□ 1.12
LMO4-202ENST00000370544 USP44Q9H0E7 712 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 ATP2A1O14983 1001 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 IGSF22Q8N9C0 903 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 SSH3Q8TE77 659 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 LZTS2Q9BRK4 669 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 PLCB3Q01970 1234 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 TBC1D8BQ0IIM8 1120 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 CCDC122Q5T0U0 273 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 GIMAP7Q8NHV1 300 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 SYNRGQ9UMZ2 1314 aa22.06■■□□□ 1.12
LMO4-202ENST00000370544 CA8P35219 290 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 TRIM14Q14142 442 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 VPS16Q9H269 839 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 GRIPAP1Q4V328 841 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 TGFBRAP1Q8WUH2 860 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 SLC1A4P43007 532 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 ATP6V0A2Q9Y487 856 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 PABPN1LA6NDY0 278 aaKnown RBP22.05■■□□□ 1.12
LMO4-202ENST00000370544 STMN4Q9H169 189 aaPredicted RBP22.05■■□□□ 1.12
LMO4-202ENST00000370544 USP21Q9UK80 565 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 PPM1FP49593 454 aaPredicted RBP22.05■■□□□ 1.12
LMO4-202ENST00000370544 ZYXQ15942 572 aaKnown RBP22.05■■□□□ 1.12
LMO4-202ENST00000370544 PKNOX2Q96KN3 472 aa22.05■■□□□ 1.12
LMO4-202ENST00000370544 LARGE2Q8N3Y3 721 aa22.04■■□□□ 1.12
LMO4-202ENST00000370544 JAK2O60674 1132 aa22.04■■□□□ 1.12
LMO4-202ENST00000370544 ECM2O94769 699 aaPredicted RBP22.04■■□□□ 1.12
LMO4-202ENST00000370544 SUPT20HQ8NEM7 779 aa22.04■■□□□ 1.12
LMO4-202ENST00000370544 TM6SF1Q9BZW5 370 aa22.04■■□□□ 1.12
LMO4-202ENST00000370544 SMTNP53814 917 aa22.04■■□□□ 1.12
LMO4-202ENST00000370544 PPP1R9BQ96SB3 815 aa22.04■■□□□ 1.12
LMO4-202ENST00000370544 PPARAQ07869 468 aa22.04■■□□□ 1.12
LMO4-202ENST00000370544 SREK1Q8WXA9 508 aaKnown RBP22.04■■□□□ 1.12
LMO4-202ENST00000370544 TRERF1Q96PN7 1200 aa22.04■■□□□ 1.12
LMO4-202ENST00000370544 PAIP2Q9BPZ3 127 aaKnown RBP22.04■■□□□ 1.12
LMO4-202ENST00000370544 NSRP1Q9H0G5 558 aaKnown RBP22.04■■□□□ 1.12
LMO4-202ENST00000370544 CALUO43852 315 aaPredicted RBP22.03■■□□□ 1.12
LMO4-202ENST00000370544 ZNF202O95125 648 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 PAK1Q13153 545 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 NCAPH2Q6IBW4 605 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 TBC1D22AQ8WUA7 517 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 EDC3Q96F86 508 aaKnown RBP22.03■■□□□ 1.12
LMO4-202ENST00000370544 KCNJ14Q9UNX9 436 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 MAPK8IP1Q9UQF2 711 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 STK24Q9Y6E0 443 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 FNBP1Q96RU3 617 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 YEATS2Q9ULM3 1422 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 FERP16591 822 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 CSGALNACT2Q8N6G5 542 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 PSMD1Q99460 953 aa22.03■■□□□ 1.12
LMO4-202ENST00000370544 RNF123Q5XPI4 1314 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms