RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 UBR3Q6ZT12 1888 aa23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 IRS2Q9Y4H2 1338 aa23.73■■□□□ 1.39
CHRNA3-202ENST00000348639 CHAF1AQ13111 956 aaPredicted RBP23.72■■□□□ 1.39
CHRNA3-202ENST00000348639 TMED8Q6PL24 325 aaPredicted RBP23.72■■□□□ 1.39
CHRNA3-202ENST00000348639 TXNRD3Q86VQ6 643 aa23.72■■□□□ 1.39
CHRNA3-202ENST00000348639 TMTC2Q8N394 836 aa23.72■■□□□ 1.39
CHRNA3-202ENST00000348639 DYNLL1P63167 89 aaKnown RBP23.72■■□□□ 1.39
CHRNA3-202ENST00000348639 SYNE3Q6ZMZ3 975 aa23.72■■□□□ 1.39
CHRNA3-202ENST00000348639 ALG1Q9BT22 464 aa23.72■■□□□ 1.39
CHRNA3-202ENST00000348639 ERICH2A1L162 156 aa23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 MECOMQ03112 1051 aa23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 RPGRQ92834 1020 aaKnown RBP23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 MINDY4BA8MYZ0 360 aa23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 IARSP41252 1262 aaKnown RBP23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 KIF23Q02241 960 aaPredicted RBP23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 WTAPQ15007 396 aa23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 CCDC144CPQ8IYA2 1237 aa23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 MYL10Q9BUA6 226 aa23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 GJB4Q9NTQ9 266 aa23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 JAG2Q9Y219 1238 aa23.71■■□□□ 1.39
CHRNA3-202ENST00000348639 SERPINB2P05120 415 aa23.7■■□□□ 1.38
CHRNA3-202ENST00000348639 ST5P78524 1137 aa23.7■■□□□ 1.38
CHRNA3-202ENST00000348639 ZSCAN30Q86W11 494 aa23.7■■□□□ 1.38
CHRNA3-202ENST00000348639 LEMD3Q9Y2U8 911 aa23.7■■□□□ 1.38
CHRNA3-202ENST00000348639 STK36Q9NRP7 1315 aa23.7■■□□□ 1.38
CHRNA3-202ENST00000348639 MYH13Q9UKX3 1938 aa23.7■■□□□ 1.38
CHRNA3-202ENST00000348639 POLR3DP05423 398 aaPredicted RBP23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 RCAN1P53805 252 aa23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 MYSM1Q5VVJ2 828 aa23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 CCAR1Q8IX12 1150 aaKnown RBP23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 ESR2Q92731 530 aa23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 PHKBQ93100 1093 aa23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 POLR3EQ9NVU0 708 aa23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 RANBP6O60518 1105 aaKnown RBP23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 TYRO3Q06418 890 aa23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 AIFM3Q96NN9 605 aa23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 ZKSCAN3Q9BRR0 538 aa23.69■■□□□ 1.38
CHRNA3-202ENST00000348639 KIF28PB7ZC32 967 aa23.68■■□□□ 1.38
CHRNA3-202ENST00000348639 YEATS4O95619 227 aa23.68■■□□□ 1.38
CHRNA3-202ENST00000348639 PCP11498 1178 aaKnown RBP23.68■■□□□ 1.38
CHRNA3-202ENST00000348639 ME1P48163 572 aa23.68■■□□□ 1.38
CHRNA3-202ENST00000348639 TXNRD1Q16881 649 aa23.68■■□□□ 1.38
CHRNA3-202ENST00000348639 CKAP2LQ8IYA6 745 aa23.68■■□□□ 1.38
CHRNA3-202ENST00000348639 LINC00301Q8NCQ3 95 aa23.68■■□□□ 1.38
CHRNA3-202ENST00000348639 IFNAR1P17181 557 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 UBAC1Q9BSL1 405 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 MRVI1Q9Y6F6 885 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 IGSF3O75054 1194 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 PRDX5P30044 214 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 SSRP1Q08945 709 aaKnown RBP23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 KRT40Q6A162 431 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 CCDC73Q6ZRK6 1079 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 PROM2Q8N271 834 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 KCNG4Q8TDN1 519 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 GOLPH3LQ9H4A5 285 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 USP25Q9UHP3 1055 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 CLIC4Q9Y696 253 aa23.67■■□□□ 1.38
CHRNA3-202ENST00000348639 FMNL1O95466 1100 aaPredicted RBP23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 FGRP09769 529 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 SPTY2D1Q68D10 685 aaPredicted RBP23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 ADALQ6DHV7 355 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 CCDC39Q9UFE4 941 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 PCDHA7Q9UN72 937 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 XDHP47989 1333 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 SNW1Q13573 536 aaKnown RBP23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 SEC23AQ15436 765 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 RTN1Q16799 776 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 CRY2Q49AN0 593 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 CTR9Q6PD62 1173 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 WASF1Q92558 559 aa23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 CRNKL1Q9BZJ0 848 aaKnown RBP23.66■■□□□ 1.38
CHRNA3-202ENST00000348639 CCDC196A0A1B0GTZ2 297 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 A0A1W2PQ27 194 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 A0A1W2PQ64 194 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 A0A1W2PQD8 194 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 CTAGE5O15320 804 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 FAM160A1Q05DH4 1040 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 STK38Q15208 465 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 ENGASEQ8NFI3 743 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 FAM200AQ8TCP9 573 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 SLC26A6Q9BXS9 759 aa23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 NOL7Q9UMY1 257 aaKnown RBP23.65■■□□□ 1.38
CHRNA3-202ENST00000348639 TRIM29Q14134 588 aa23.64■■□□□ 1.38
CHRNA3-202ENST00000348639 C15orf52Q6ZUT6 534 aaKnown RBP23.64■■□□□ 1.38
CHRNA3-202ENST00000348639 ZNF654Q8IZM8 581 aa23.64■■□□□ 1.38
CHRNA3-202ENST00000348639 GPR101Q96P66 508 aaPredicted RBP23.64■■□□□ 1.38
CHRNA3-202ENST00000348639 ATP8A2Q9NTI2 1148 aa23.64■■□□□ 1.38
CHRNA3-202ENST00000348639 AATFQ9NY61 560 aaKnown RBP eCLIP23.64■■□□□ 1.38
CHRNA3-202ENST00000348639 MAST2Q6P0Q8 1798 aa23.64■■□□□ 1.37
CHRNA3-202ENST00000348639 SMIM22K7EJ46 135 aa23.64■■□□□ 1.37
CHRNA3-202ENST00000348639 SASS6Q6UVJ0 657 aa23.64■■□□□ 1.37
CHRNA3-202ENST00000348639 FSIP1Q8NA03 581 aa23.64■■□□□ 1.37
CHRNA3-202ENST00000348639 TNKSO95271 1327 aa23.64■■□□□ 1.37
CHRNA3-202ENST00000348639 DUOX1Q9NRD9 1551 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 CYP2D7A0A087X1C5 515 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 USP17L12C9JPN9 530 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 USP17L21D6R901 530 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 SPTLC2O15270 562 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 DDR1Q08345 913 aa23.63■■□□□ 1.37
CHRNA3-202ENST00000348639 SF3A1Q15459 793 aaKnown RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms