RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 POLR2DO15514 142 aaKnown RBP16.76■□□□□ 0.27
SMTN-202ENST00000347557 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
SMTN-202ENST00000347557 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
SMTN-202ENST00000347557 MIGA1Q8NAN2 632 aa16.76■□□□□ 0.27
SMTN-202ENST00000347557 TTLL11Q8NHH1 800 aa16.76■□□□□ 0.27
SMTN-202ENST00000347557 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
SMTN-202ENST00000347557 ZSWIM5Q9P217 1185 aa16.76■□□□□ 0.27
SMTN-202ENST00000347557 MORC2Q9Y6X9 1032 aaPredicted RBP16.76■□□□□ 0.27
SMTN-202ENST00000347557 ARFGEF2Q9Y6D5 1785 aa16.75■□□□□ 0.27
SMTN-202ENST00000347557 CBFA2T2O43439 604 aa16.75■□□□□ 0.27
SMTN-202ENST00000347557 TDO2P48775 406 aa16.75■□□□□ 0.27
SMTN-202ENST00000347557 CPLX3Q8WVH0 158 aa16.75■□□□□ 0.27
SMTN-202ENST00000347557 BPIFA3Q9BQP9 254 aa16.75■□□□□ 0.27
SMTN-202ENST00000347557 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMTN-202ENST00000347557 ETF1P62495 437 aaKnown RBP16.75■□□□□ 0.27
SMTN-202ENST00000347557 IRX5P78411 483 aaPredicted RBP16.75■□□□□ 0.27
SMTN-202ENST00000347557 HSD3B7Q9H2F3 369 aa16.75■□□□□ 0.27
SMTN-202ENST00000347557 RIPOR2Q9Y4F9 1068 aa16.75■□□□□ 0.27
SMTN-202ENST00000347557 NR5A1Q13285 461 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 KRBA2Q6ZNG9 492 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 ZSWIM4Q9H7M6 989 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
SMTN-202ENST00000347557 UBN2Q6ZU65 1347 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 PSDA5PKW4 1024 aaPredicted RBP16.74■□□□□ 0.27
SMTN-202ENST00000347557 GNG11P61952 73 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 PTPAQ15257 358 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 DIS3L2Q8IYB7 885 aaKnown RBP16.74■□□□□ 0.27
SMTN-202ENST00000347557 DESI2Q9BSY9 194 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 ZNF446Q9NWS9 450 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 POLR3GO15318 223 aaPredicted RBP16.74■□□□□ 0.27
SMTN-202ENST00000347557 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
SMTN-202ENST00000347557 SERTAD1Q9UHV2 236 aa16.74■□□□□ 0.27
SMTN-202ENST00000347557 IKBKBO14920 756 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 STX17P56962 302 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 CERS3Q8IU89 383 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 KRI1Q8N9T8 703 aaKnown RBP16.73■□□□□ 0.27
SMTN-202ENST00000347557 NFE2L3Q9Y4A8 694 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 MINDY4BA8MYZ0 360 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 STARD3NLO95772 234 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 AFMP43652 599 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 CLCN6P51797 869 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 TTF1Q15361 905 aaPredicted RBP16.73■□□□□ 0.27
SMTN-202ENST00000347557 LY9Q9HBG7 655 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 CPDO75976 1380 aa16.73■□□□□ 0.27
SMTN-202ENST00000347557 SPATA31A3Q5VYP0 1347 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 COBLO75128 1261 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 SEC31AO94979 1220 aaKnown RBP16.72■□□□□ 0.27
SMTN-202ENST00000347557 CTSWP56202 376 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 RESP18Q5W5W9 173 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 FBXL16Q8N461 479 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 IGDCC4Q8TDY8 1250 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 CUTAO60888 179 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 TEX35Q5T0J7 233 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 NLRP10Q86W26 655 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 IFNL3Q8IZI9 196 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 STRBPQ96SI9 672 aaKnown RBP16.72■□□□□ 0.27
SMTN-202ENST00000347557 MAP3K14Q99558 947 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 TUBE1Q9UJT0 475 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 PPP6R2O75170 966 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 PDE8BO95263 885 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 BMP6P22004 513 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 CASP1P29466 404 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 USP49Q70CQ1 688 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 NOSTRINQ8IVI9 506 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 PIGBQ92521 554 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 PCDHB6Q9Y5E3 794 aa16.72■□□□□ 0.27
SMTN-202ENST00000347557 SLFN14P0C7P3 912 aa16.71■□□□□ 0.27
SMTN-202ENST00000347557 VSTM4Q8IW00 320 aa16.71■□□□□ 0.27
SMTN-202ENST00000347557 FAM217BQ9NTX9 383 aaPredicted RBP16.71■□□□□ 0.27
SMTN-202ENST00000347557 HPSEQ9Y251 543 aa16.71■□□□□ 0.27
SMTN-202ENST00000347557 ERICH2A1L162 156 aa16.71■□□□□ 0.27
SMTN-202ENST00000347557 CSF1RP07333 972 aa16.71■□□□□ 0.27
SMTN-202ENST00000347557 FMR1Q06787 632 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMTN-202ENST00000347557 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
SMTN-202ENST00000347557 TIGD1Q96MW7 591 aa16.71■□□□□ 0.27
SMTN-202ENST00000347557 BAG1Q99933 345 aaPredicted RBP16.71■□□□□ 0.27
SMTN-202ENST00000347557 SLC4A4Q9Y6R1 1079 aa16.71■□□□□ 0.27
SMTN-202ENST00000347557 GABPB1Q06547 395 aaPredicted RBP16.7■□□□□ 0.26
SMTN-202ENST00000347557 POSTNQ15063 836 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 NTRK3Q16288 839 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 RTN1Q16799 776 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 GIGYF2Q6Y7W6 1299 aaKnown RBP16.7■□□□□ 0.26
SMTN-202ENST00000347557 OXER1Q8TDS5 423 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 STAMQ92783 540 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 SMARCE1Q969G3 411 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
SMTN-202ENST00000347557 SAMSN1Q9NSI8 373 aaKnown RBP16.7■□□□□ 0.26
SMTN-202ENST00000347557 HOOK1Q9UJC3 728 aaKnown RBP16.7■□□□□ 0.26
SMTN-202ENST00000347557 MAN1B1Q9UKM7 699 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 MAP3K12Q12852 859 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
SMTN-202ENST00000347557 WTAPQ15007 396 aa16.7■□□□□ 0.26
SMTN-202ENST00000347557 TERF2Q15554 542 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms