RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 I3L4J1 428 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 TRPC3Q13507 836 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 NCOA7Q8NI08 942 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 KDM5DQ9BY66 1539 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 IFIT3O14879 490 aaKnown RBP15.19■□□□□ 0.02
TRIO-202ENST00000344204 NR1I2O75469 434 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 LRRC27Q9C0I9 530 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 MBIPQ9NS73 344 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 IKQ13123 557 aaPredicted RBP15.19■□□□□ 0.02
TRIO-202ENST00000344204 RGS12O14924 1447 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 CCDC144CPQ8IYA2 1237 aa15.19■□□□□ 0.02
TRIO-202ENST00000344204 KLF18A0A0U1RQI7 1052 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 CDC37L1Q7L3B6 337 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 FAM212AQ96EL1 285 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 CNOT10Q9H9A5 744 aaKnown RBP15.18■□□□□ 0.02
TRIO-202ENST00000344204 ATP2A2P16615 1042 aaKnown RBP15.18■□□□□ 0.02
TRIO-202ENST00000344204 SLF1Q9BQI6 1058 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 GNPTABQ3T906 1256 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 TMEM132AQ24JP5 1023 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 IFIH1Q9BYX4 1025 aaKnown RBP15.18■□□□□ 0.02
TRIO-202ENST00000344204 CLUL1Q15846 466 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 TCERG1LQ5VWI1 586 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 TRIM58Q8NG06 486 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 FBXO41Q8TF61 875 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 COL17A1Q9UMD9 1497 aaPredicted RBP15.18■□□□□ 0.02
TRIO-202ENST00000344204 ZNF213O14771 459 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 ASIC1P78348 528 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 APOBRQ0VD83 1088 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 IQGAP2Q13576 1575 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 MCM10Q7L590 875 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 GSTA5Q7RTV2 222 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 MGARPQ8TDB4 240 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 DHX58Q96C10 678 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 PIK3R4Q99570 1358 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 TPD52P55327 224 aaPredicted RBP15.18■□□□□ 0.02
TRIO-202ENST00000344204 KIF6Q6ZMV9 814 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 CCDC152Q4G0S7 254 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 PDLIM2Q96JY6 352 aa15.18■□□□□ 0.02
TRIO-202ENST00000344204 KIF20BQ96Q89 1820 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 RASSF10A6NK89 507 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 PARP9Q8IXQ6 854 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 ZFXP17010 805 aaPredicted RBP15.17■□□□□ 0.02
TRIO-202ENST00000344204 MUM1L1Q5H9M0 696 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 NFE2L3Q9Y4A8 694 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 TRIM35Q9UPQ4 493 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 PTPDC1A2A3K4 754 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 STMN1P16949 149 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 ADKP55263 362 aaKnown RBP15.17■□□□□ 0.02
TRIO-202ENST00000344204 CASP8Q14790 479 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 MMRN2Q9H8L6 949 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 XAB2Q9HCS7 855 aaKnown RBP15.17■□□□□ 0.02
TRIO-202ENST00000344204 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 CFAP74Q9C0B2 1584 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 RNASE9P60153 205 aaKnown RBP15.17■□□□□ 0.02
TRIO-202ENST00000344204 CC2D1AQ6P1N0 951 aaPredicted RBP15.17■□□□□ 0.02
TRIO-202ENST00000344204 CTTNBP2NLQ9P2B4 639 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 KCNH3Q9ULD8 1083 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 SEL1L2Q5TEA6 688 aa15.17■□□□□ 0.02
TRIO-202ENST00000344204 PAIP2BQ9ULR5 123 aaKnown RBP15.16■□□□□ 0.02
TRIO-202ENST00000344204 YIPF3Q9GZM5 350 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 POLR3AO14802 1390 aaPredicted RBP15.16■□□□□ 0.02
TRIO-202ENST00000344204 ANO1Q5XXA6 986 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 HOMER3Q9NSC5 361 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 HDAC9Q9UKV0 1011 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 SF3A3Q12874 501 aaKnown RBP eCLIP15.16■□□□□ 0.021e-6■■■■□ 20.2
TRIO-202ENST00000344204 MRPL50Q8N5N7 158 aaKnown RBP15.16■□□□□ 0.02
TRIO-202ENST00000344204 HAUS1Q96CS2 278 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 RNF41Q9H4P4 317 aaPredicted RBP15.16■□□□□ 0.02
TRIO-202ENST00000344204 PSMD7P51665 324 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 C16orf71Q8IYS4 520 aaPredicted RBP15.16■□□□□ 0.02
TRIO-202ENST00000344204 TRIM75PA6NK02 468 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 CEP85Q6P2H3 762 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 USP6NLQ92738 828 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 SLC30A9Q6PML9 568 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 IDH1O75874 414 aaKnown RBP15.16■□□□□ 0.02
TRIO-202ENST00000344204 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
TRIO-202ENST00000344204 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 RNF8O76064 485 aa15.16■□□□□ 0.02
TRIO-202ENST00000344204 FLIIQ13045 1269 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 GYS2P54840 703 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 KCTD16Q68DU8 428 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 FGD4Q96M96 766 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 CHCHD3Q9NX63 227 aaKnown RBP15.15■□□□□ 0.02
TRIO-202ENST00000344204 PDCD7Q8N8D1 485 aaKnown RBP15.15■□□□□ 0.02
TRIO-202ENST00000344204 MLKLQ8NB16 471 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 MSH6P52701 1360 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 ZBTB43O43298 467 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 RAB17Q9H0T7 212 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 PRAG1Q86YV5 1406 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 FAM210AQ96ND0 272 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 NUP58Q9BVL2 599 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 HHATQ5VTY9 493 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 P3H4Q92791 437 aa15.15■□□□□ 0.02
TRIO-202ENST00000344204 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
TRIO-202ENST00000344204 TMEM110-MUSTN1A8MSY1 372 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 CCDC8Q9H0W5 538 aaPredicted RBP15.14■□□□□ 0.01
TRIO-202ENST00000344204 MAP3K7O43318 606 aa15.14■□□□□ 0.01
TRIO-202ENST00000344204 UBL4BQ8N7F7 174 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms