RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 NPHP1O15259 732 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 FAM160A1Q05DH4 1040 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 SART3Q15020 963 aaKnown RBP18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 STK38Q15208 465 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 ADALQ6DHV7 355 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 SYNE3Q6ZMZ3 975 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 TXNRD3Q86VQ6 643 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 CBX8Q9HC52 389 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 ANAPC4Q9UJX5 808 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 WTAPQ15007 396 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 LRRC4BQ9NT99 713 aa18.5■□□□□ 0.55
CCDC144A-202ENST00000340621 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 ONECUT3O60422 494 aaPredicted RBP18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 YEATS4O95619 227 aa18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 MECOMQ03112 1051 aa18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 SF3A1Q15459 793 aaKnown RBP18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 SLC26A6Q9BXS9 759 aa18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 SPTLC2O15270 562 aa18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 ZNF500O60304 480 aaPredicted RBP18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 SSRP1Q08945 709 aaKnown RBP18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 NFIXQ14938 502 aa18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 SLC51AQ86UW1 340 aa18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 KCNG4Q8TDN1 519 aa18.49■□□□□ 0.55
CCDC144A-202ENST00000340621 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 C4BP0C0L5 1744 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 AFF2P51816 1311 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 A0A1B0GVL5 298 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 A0A1W2PQ27 194 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 A0A1W2PQ64 194 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 A0A1W2PQD8 194 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 ERICH2A1L162 156 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 CTAGE5O15320 804 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 CHAF1AQ13111 956 aaPredicted RBP18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 ANO1Q5XXA6 986 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 SEPT12Q8IYM1 358 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 FMR1NBQ8N0W7 255 aaPredicted RBP18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 TMTC2Q8N394 836 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 MRPS27Q92552 414 aaKnown RBP18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 MTA3Q9BTC8 594 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 BRIP1Q9BX63 1249 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 DNAJC25Q9H1X3 360 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
CCDC144A-202ENST00000340621 KINO60870 393 aaKnown RBP18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 FMNL1O95466 1100 aaPredicted RBP18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 IFNAR1P17181 557 aa18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 TIAM2Q8IVF5 1701 aa18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 GUCY1A2P33402 732 aa18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 NDUFA8P51970 172 aa18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 ESR2Q92731 530 aa18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 ZNF830Q96NB3 372 aaPredicted RBP18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 UBAC1Q9BSL1 405 aa18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 JAG2Q9Y219 1238 aa18.47■□□□□ 0.55
CCDC144A-202ENST00000340621 PRDX5P30044 214 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 ZNF165P49910 485 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 RTN1Q16799 776 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 CTR9Q6PD62 1173 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 CMTR1Q8N1G2 835 aaKnown RBP18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 CCDC82Q8N4S0 544 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 PDS5AQ29RF7 1337 aaKnown RBP18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 U2AF2P26368 475 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 TRIM29Q14134 588 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 SEC23AQ15436 765 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 FANCBQ8NB91 859 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 STK36Q9NRP7 1315 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 IRS2Q9Y4H2 1338 aa18.46■□□□□ 0.55
CCDC144A-202ENST00000340621 CACNA1SQ13698 1873 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 NID2Q14112 1375 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 MYH15Q9Y2K3 1946 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 GNL2Q13823 731 aaKnown RBP18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 SLC39A14Q15043 492 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 AXDND1Q5T1B0 1012 aaPredicted RBP18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 NBPF11Q86T75 865 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 ZNF654Q8IZM8 581 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 NUP133Q8WUM0 1156 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 AATFQ9NY61 560 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 TNKSO95271 1327 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 A0A1B0GUL6 1792 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 EP400Q96L91 3159 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 USP17L12C9JPN9 530 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 USP17L21D6R901 530 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 PRDM1O75626 825 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 EVX2Q03828 476 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 CRACR2BQ8N4Y2 399 aaPredicted RBP18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 CNBD1Q8NA66 436 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 ERCC4Q92889 916 aaPredicted RBP18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 ANKIB1Q9P2G1 1089 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 COL24A1Q17RW2 1714 aa18.45■□□□□ 0.54
CCDC144A-202ENST00000340621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.44■□□□□ 0.54
CCDC144A-202ENST00000340621 WDHD1O75717 1129 aaPredicted RBP18.44■□□□□ 0.54
CCDC144A-202ENST00000340621 MARCKSP29966 332 aaPredicted RBP18.44■□□□□ 0.54
CCDC144A-202ENST00000340621 HSPA1LP34931 641 aa18.44■□□□□ 0.54
CCDC144A-202ENST00000340621 GRAPQ13588 217 aa18.43■□□□□ 0.54
CCDC144A-202ENST00000340621 ENAHQ8N8S7 591 aaPredicted RBP18.43■□□□□ 0.54
CCDC144A-202ENST00000340621 GRAPLQ8TC17 118 aaPredicted RBP18.43■□□□□ 0.54
CCDC144A-202ENST00000340621 NAP1L5Q96NT1 182 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms